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PDB形式変換不可の PDB エントリー
8PDG
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The phosphatase and C2 domains of SHIP1 with covalent Z2738285202
分子名称: DIMETHYL SULFOXIDE, Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1, ~{N}-(8-chloranylquinolin-2-yl)propanamide
著者Bradshaw, W.J, Moreira, T, Scacioc, A, Bountra, C, Chalk, R, von Delft, F, Brennan, P.E, Gileadi, O.
登録日2023-06-12
公開日2023-06-28
最終更新日2024-04-17
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Regulation of inositol 5-phosphatase activity by the C2 domain of SHIP1 and SHIP2.
Structure, 32, 2024
8PDH
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The phosphatase and C2 domains of SHIP1 with covalent Z1742148362
分子名称: (5-phenyl-1,3,4-oxadiazol-2-yl)methanimine, 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, ...
著者Bradshaw, W.J, Moreira, T, Pascoa, T.C, Bountra, C, Chalk, R, von Delft, F, Brennan, P.E, Gileadi, O.
登録日2023-06-12
公開日2023-06-28
最終更新日2024-04-17
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Regulation of inositol 5-phosphatase activity by the C2 domain of SHIP1 and SHIP2.
Structure, 32, 2024
8PDJ
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The phosphatase and C2 domains of SHIP1 with covalent Z56948267
分子名称: 4-azanyl-3-fluoranyl-benzenethiol, DIMETHYL SULFOXIDE, Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1
著者Bradshaw, W.J, Moreira, T, Pascoa, T.C, Bountra, C, Chalk, R, von Delft, F, Brennan, P.E, Gileadi, O.
登録日2023-06-12
公開日2023-06-28
最終更新日2024-04-17
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Regulation of inositol 5-phosphatase activity by the C2 domain of SHIP1 and SHIP2.
Structure, 32, 2024
8PEG
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Escherichia coli paused disome complex (queueing 70S non-rotated closed PRE state)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S1, ...
著者Fluegel, T, Schacherl, M.
登録日2023-06-13
公開日2024-03-06
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
8PFE
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Crystal Structure of an Hexavariant of the b1 Domain of Human Neuropilin-1 in Complex with the KDKPPR Peptide
分子名称: ACETATE ION, LYS-ASP-LYS-PRO-PRO-ARG, Neuropilin-1
著者Jelsch, C, Favier, F, Didierjean, C.
登録日2023-06-15
公開日2023-08-02
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献New Crystal Form of Human Neuropilin-1 b1 Fragment with Six Electrostatic Mutations Complexed with KDKPPR Peptide Ligand.
Molecules, 28, 2023
8PFR
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Mouse RPL39L integrated into the yeast 60S ribosomal subunit
分子名称: 25S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Rabl, J, Banerjee, A, Boehringer, D, Zavolan, M.
登録日2023-06-16
公開日2024-06-26
実験手法ELECTRON MICROSCOPY (2.15 Å)
主引用文献Mouse RPL39L integrated into the yeast 60S ribosomal subunit
To Be Published
8PFV
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X-ray structure of the adduct formed upon reaction of Lysozyme with [Ru2Cl(DAniF)(O2CCH3)3] in condition A
分子名称: 9,11-bis(4-methoxyphenyl)-3,7-dimethyl-2,4,6,8-tetraoxa-9,11-diaza-1$l^{4},5$l^{4}-diruthenatricyclo[3.3.3.0^{1,5}]undecane, CHLORIDE ION, Lysozyme C, ...
著者Teran, A, Ferraro, G, Merlino, A.
登録日2023-06-16
公開日2023-07-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Charge effect in protein metalation reactions by diruthenium complexes
Inorg Chem Front, 2023
8PH5
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X-ray structure of the adduct formed upon reaction of Lysozyme with [Ru2Cl(DPhF)2(O2CCH3)2] in condition B
分子名称: 1-oxidanyl-6,8,9,11-tetraphenyl-2,4-dioxa-6,8,9,11-tetraza-1$l^{5},5$l^{4}-diruthenatricyclo[3.3.3.0^{1,5}]undecane, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Lysozyme C
著者Teran, A, Ferraro, G, Merlino, A.
登録日2023-06-19
公開日2023-09-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Steric hindrance and charge influence on the cytotoxic activity and protein binding properties of diruthenium complexes.
Int.J.Biol.Macromol., 253, 2023
8PH8
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X-ray structure of the adduct formed upon reaction of Lysozyme with [Ru2Cl(DPhF)2(O2CCH3)2] in condition A
分子名称: 1-oxidanyl-2,4,6,8-tetraphenyl-2,4,6,8-tetraza-1$l^{4},5$l^{3}-diruthenabicyclo[3.3.0]octane, Lysozyme C, SODIUM ION, ...
著者Teran, A, Ferraro, G, Merlino, A.
登録日2023-06-19
公開日2023-09-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Steric hindrance and charge influence on the cytotoxic activity and protein binding properties of diruthenium complexes.
Int.J.Biol.Macromol., 253, 2023
8PHJ
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cA4-bound Cami1 in complex with 70S ribosome
分子名称: 16S rRNA, 23S rRNA (2862-MER), 5S rRNA, ...
著者Tamulaitiene, G, Mogila, I, Sasnauskas, G, Tamulaitis, G.
登録日2023-06-20
公開日2023-12-13
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.67 Å)
主引用文献Ribosomal stalk-captured CARF-RelE ribonuclease inhibits translation following CRISPR signaling.
Science, 382, 2023
8PHQ
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Top cap of the Borrelia bacteriophage BB1 procapsid, fivefold-symmetrized outer shell
分子名称: Decorator protein P03, Decorator protein P05, Major capsid protein, ...
著者Rumnieks, J, Fuzik, T, Tars, K.
登録日2023-06-20
公開日2023-07-19
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.69 Å)
主引用文献Structure of the Borrelia Bacteriophage phi BB1 Procapsid.
J.Mol.Biol., 435, 2023
8PHR
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Middle part of the Borrelia bacteriophage BB1 procapsid, tenfold-symmetrized outer shell
分子名称: Decorator protein P03, Decorator protein P05, Major capsid protein, ...
著者Rumnieks, J, Fuzik, T, Tars, K.
登録日2023-06-20
公開日2023-07-19
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.65 Å)
主引用文献Structure of the Borrelia Bacteriophage phi BB1 Procapsid.
J.Mol.Biol., 435, 2023
8PHS
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Bottom cap of the Borrelia bacteriophage BB1 procapsid, fivefold-symmetrized outer shell
分子名称: Decorator protein P03, Decorator protein P04, Decorator protein P05, ...
著者Rumnieks, J, Fuzik, T, Tars, K.
登録日2023-06-20
公開日2023-07-19
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.82 Å)
主引用文献Structure of the Borrelia Bacteriophage phi BB1 Procapsid.
J.Mol.Biol., 435, 2023
8PHU
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BU of 8phu by Molmil
Asymmetric structure of the portal-containing cap of the Borrelia bacteriophage BB1 procapsid
分子名称: Decorator protein P03, Decorator protein P04, Decorator protein P05, ...
著者Rumnieks, J, Fuzik, T, Tars, K.
登録日2023-06-20
公開日2023-07-19
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (7.41 Å)
主引用文献Structure of the Borrelia Bacteriophage phi BB1 Procapsid.
J.Mol.Biol., 435, 2023
8PI3
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Cathepsin S Y132D mutant in complex with NNPI-C10 inhibitor
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CADMIUM ION, ...
著者Petruzzella, A, Lau, K, Pojer, F, Oricchio, E.
登録日2023-06-21
公開日2024-06-05
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Antibody-peptide conjugates deliver covalent inhibitors blocking oncogenic cathepsins.
Nat.Chem.Biol., 2024
8PIU
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60-meric complex of dihydrolipoamide acetyltransferase (E2) of the human pyruvate dehydrogenase complex
分子名称: Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial
著者Zdanowicz, R, Afanasyev, P, Boehringer, D, Glockshuber, R.
登録日2023-06-22
公開日2024-07-10
最終更新日2024-07-31
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Stoichiometry and architecture of the human pyruvate dehydrogenase complex.
Sci Adv, 10, 2024
8PJJ
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Cryo-EM structure of MLE in complex with SL7UUC RNA and ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Dosage compensation regulator, SL7UUC RNA
著者Jagtap, P.K.A, Hennig, J.
登録日2023-06-23
公開日2023-11-22
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (4.24 Å)
主引用文献Structural basis of RNA-induced autoregulation of the DExH-type RNA helicase maleless.
Mol.Cell, 83, 2023
8PJM
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Metallo beta-lactamase VIM2 with compound AK110
分子名称: Beta-lactamase VIM-2, CHLORIDE ION, SODIUM ION, ...
著者Lucic, A, Hinchliffe, P, Schofield, C.
登録日2023-06-23
公開日2023-08-16
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Metallo beta-lactamase VIM2 with compound AK110
To Be Published
8PK0
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human mitoribosomal large subunit assembly intermediate 1 with GTPBP10-GTPBP7
分子名称: 16S rRNA + pre-H68-71 segment, 39S ribosomal protein L10, mitochondrial, ...
著者Kummer, E, Nguyen, T.G, Ritter, C.
登録日2023-06-23
公開日2023-12-13
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献Structural insights into the role of GTPBP10 in the RNA maturation of the mitoribosome.
Nat Commun, 14, 2023
8PKH
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Borrelia bacteriophage BB1 procapsid, fivefold-symmetrized outer shell
分子名称: Decorator protein P03, Decorator protein P04, Decorator protein P05, ...
著者Rumnieks, J, Fuzik, T, Tars, K.
登録日2023-06-26
公開日2023-07-12
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Structure of the Borrelia Bacteriophage phi BB1 Procapsid.
J.Mol.Biol., 435, 2023
8PKL
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Escherichia coli paused disome complex (leading 70S non-rotated closed PRE state)
分子名称: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ...
著者Fluegel, T, Schacherl, M.
登録日2023-06-26
公開日2024-03-06
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.09 Å)
主引用文献Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
8PM0
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Influenza A/H7N9 polymerase in replicase-like conformation in pre-initiation state with Pol II pS5 CTD peptide mimic bound in site 1A/2A
分子名称: 51-mer vRNA loop (v51_mut_S), MAGNESIUM ION, Polymerase acidic protein, ...
著者Arragain, B, Cusack, S.
登録日2023-06-27
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献The host RNA polymerase II C-terminal domain is the anchor for replication of the influenza virus genome.
Nat Commun, 15, 2024
8PME
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Structure of Nal1 indica cultivar IR64, construct 88-458
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Narrow leaf 1, ...
著者Huang, L.Y, Rety, S, Xi, X.G.
登録日2023-06-28
公開日2024-04-17
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
8PMG
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Structure of Nal1 indica cultivar IR64, construct 36-458
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Huang, L.Y, Rety, S, Xi, X.G.
登録日2023-06-28
公開日2024-04-17
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (3.29 Å)
主引用文献The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
8PMI
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Structure of Nal1 indica cultivar IR64, construct 36-458 in presence of peptide from FZP protein
分子名称: ADENOSINE-5'-TRIPHOSPHATE, AMMONIUM ION, MAGNESIUM ION, ...
著者Huang, L.Y, Rety, S, Xi, X.G.
登録日2023-06-28
公開日2024-04-17
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024

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件を2024-08-07に公開中

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