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PDB形式変換不可の PDB エントリー
7NR2
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BU of 7nr2 by Molmil
The structure of the SBP TarP_Sse in complex with coumarate
分子名称: 4'-HYDROXYCINNAMIC ACID, SULFATE ION, TRAP dicarboxylate transporter, ...
著者Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
登録日2021-03-02
公開日2021-10-06
最終更新日2022-01-26
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
7NRA
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BU of 7nra by Molmil
The structure of the SBP TarP_Sse in complex with cinnamate
分子名称: HYDROCINNAMIC ACID, TRAP dicarboxylate transporter, DctP subunit
著者Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
登録日2021-03-03
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
7NRC
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BU of 7nrc by Molmil
Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A
分子名称: 18S rRNA (1771-MER), 25S rRNA (3184-MER), 40S ribosomal protein S0-A, ...
著者Pochopien, A.A, Beckert, B, Wilson, D.N.
登録日2021-03-03
公開日2021-05-05
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structure of Gcn1 bound to stalled and colliding 80S ribosomes.
Proc.Natl.Acad.Sci.USA, 118, 2021
7NRD
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BU of 7nrd by Molmil
Structure of the yeast Gcn1 bound to a colliding stalled 80S ribosome with MBF1, A/P-tRNA and P/E-tRNA
分子名称: 25S rRNA (3184-MER), 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
著者Pochopien, A.A, Beckert, B, Wilson, D.N.
登録日2021-03-03
公開日2021-04-14
実験手法ELECTRON MICROSCOPY (4.36 Å)
主引用文献Structure of Gcn1 bound to stalled and colliding 80S ribosomes.
Proc.Natl.Acad.Sci.USA, 118, 2021
7NRJ
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BU of 7nrj by Molmil
Crystal Structure of a Class D carbapenemase complexed with iodide
分子名称: 1-BUTANOL, Beta-lactamase, GLYCEROL, ...
著者Zhou, Q, He, Y, Jin, Y.
登録日2021-03-04
公開日2022-03-23
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献An Ion-Pair Induced Intermediate Complex Captured in Class D Carbapenemase Reveals Chloride Ion as a Janus Effector Modulating Activity
Acs Cent.Sci., 2023
7NRR
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BU of 7nrr by Molmil
The structure of the SBP TarP_Csal in complex with caffeate
分子名称: CAFFEIC ACID, MAGNESIUM ION, TRAP dicarboxylate transporter-DctP subunit
著者Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
登録日2021-03-04
公開日2021-10-06
最終更新日2022-01-26
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
7NS0
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BU of 7ns0 by Molmil
Bacilladnavirus capsid structure
分子名称: Capsid protein VP2
著者Munke, A, Okamoto, K.
登録日2021-03-05
公開日2022-07-20
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Primordial Capsid and Spooled ssDNA Genome Structures Unravel Ancestral Events of Eukaryotic Viruses.
Mbio, 13, 2022
7NS3
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BU of 7ns3 by Molmil
Substrate receptor scaffolding module of yeast Chelator-GID SR4 E3 ubiquitin ligase bound to Fbp1 substrate
分子名称: BJ4_G0018240.mRNA.1.CDS.1, Fructose-bisphosphatase, Glucose-induced degradation protein 8, ...
著者Sherpa, D, Chrustowicz, J, Prabu, J.R, Schulman, B.A.
登録日2021-03-05
公開日2021-05-05
最終更新日2021-07-07
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献GID E3 ligase supramolecular chelate assembly configures multipronged ubiquitin targeting of an oligomeric metabolic enzyme.
Mol.Cell, 81, 2021
7NSH
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BU of 7nsh by Molmil
39S mammalian mitochondrial large ribosomal subunit with mtRRF (post) and mtEFG2
分子名称: 16S rRNA, 39S ribosomal protein L48, mitochondrial, ...
著者Kummer, E, Schubert, K, Ban, N.
登録日2021-03-07
公開日2021-05-05
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis of translation termination, rescue, and recycling in mammalian mitochondria.
Mol.Cell, 81, 2021
7NSI
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BU of 7nsi by Molmil
55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)
分子名称: 12S rRNA, 16S rRNA, 28S ribosomal protein S10, ...
著者Kummer, E, Schubert, K, Ban, N.
登録日2021-03-07
公開日2021-06-02
最終更新日2021-12-15
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Structural basis of translation termination, rescue, and recycling in mammalian mitochondria.
Mol.Cell, 81, 2021
7NSJ
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BU of 7nsj by Molmil
55S mammalian mitochondrial ribosome with tRNA(P/P) and tRNA(E*)
分子名称: 12S rRNA, 16S rRNA, 28S ribosomal protein S16, ...
著者Kummer, E, Schubert, K, Ban, N.
登録日2021-03-07
公開日2021-06-02
最終更新日2021-12-15
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural basis of translation termination, rescue, and recycling in mammalian mitochondria.
Mol.Cell, 81, 2021
7NSO
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BU of 7nso by Molmil
Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNA
分子名称: 16S rRNA (1540-MER), 23S rRNA (2903-MER), 30S ribosomal protein S10, ...
著者Beckert, B, Wilson, D.N.
登録日2021-03-08
公開日2021-07-14
最終更新日2021-08-11
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural and mechanistic basis for translation inhibition by macrolide and ketolide antibiotics.
Nat Commun, 12, 2021
7NSP
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BU of 7nsp by Molmil
Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Beckert, B, Wilson, D.N.
登録日2021-03-08
公開日2021-08-11
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural and mechanistic basis for translation inhibition by macrolide and ketolide antibiotics.
Nat Commun, 12, 2021
7NSQ
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BU of 7nsq by Molmil
Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNA
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Beckert, B, Wilson, D.N.
登録日2021-03-08
公開日2021-07-14
最終更新日2021-08-11
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural and mechanistic basis for translation inhibition by macrolide and ketolide antibiotics.
Nat Commun, 12, 2021
7NSW
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BU of 7nsw by Molmil
The structure of the SBP TarP_Csal in complex with coumarate
分子名称: 1,2-ETHANEDIOL, 4'-HYDROXYCINNAMIC ACID, MAGNESIUM ION, ...
著者Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
登録日2021-03-08
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
7NSX
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BU of 7nsx by Molmil
Drosophila PGRP-LB wild-type
分子名称: Isoform A of Peptidoglycan-recognition protein LB, ZINC ION
著者Orlans, J, Aller, P, Da Silva, P.
登録日2021-03-08
公開日2021-05-19
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献PGRP-LB: An Inside View into the Mechanism of the Amidase Reaction.
Int J Mol Sci, 22, 2021
7NSY
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BU of 7nsy by Molmil
Drosophila PGRP-LB C160S mutant
分子名称: Isoform A of Peptidoglycan-recognition protein LB
著者Orlans, J, Aller, P, Da Silva, P.
登録日2021-03-08
公開日2021-05-19
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献PGRP-LB: An Inside View into the Mechanism of the Amidase Reaction.
Int J Mol Sci, 22, 2021
7NSZ
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BU of 7nsz by Molmil
Drosophila PGRP-LB Y78F mutant
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Isoform A of Peptidoglycan-recognition protein LB, SODIUM ION, ...
著者Orlans, J, Aller, P, Da Silva, P.
登録日2021-03-08
公開日2021-05-19
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献PGRP-LB: An Inside View into the Mechanism of the Amidase Reaction.
Int J Mol Sci, 22, 2021
7NT0
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BU of 7nt0 by Molmil
Drosophila PGRP-LB Y78F mutant in complex with tracheal cytotoxin (TCT)
分子名称: GLCNAC(BETA1-4)-MURNAC(1,6-ANHYDRO)-L-ALA-GAMMA-D-GLU-MESO-A2PM-D-ALA, Isoform A of Peptidoglycan-recognition protein LB, ZINC ION
著者Orlans, J, Aller, P, Da Silva, P.
登録日2021-03-08
公開日2021-05-19
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献PGRP-LB: An Inside View into the Mechanism of the Amidase Reaction.
Int J Mol Sci, 22, 2021
7NTD
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BU of 7ntd by Molmil
The structure of the SBP TarP_Csal in complex with ferulate
分子名称: 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, MAGNESIUM ION, SULFATE ION, ...
著者Bisson, C, Salmon, R.C, West, L, Rafferty, J.B, Hitchcock, A, Thomas, G.H, Kelly, D.J.
登録日2021-03-09
公開日2021-10-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters.
Febs J., 289, 2022
7NVG
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BU of 7nvg by Molmil
Salmonella flagellar basal body refined in C1 map
分子名称: Basal-body rod modification protein FlgD, Flagellar L-ring protein, Flagellar M-ring protein, ...
著者Johnson, S, Furlong, E, Lea, S.M.
登録日2021-03-15
公開日2021-05-05
最終更新日2021-07-14
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Molecular structure of the intact bacterial flagellar basal body.
Nat Microbiol, 6, 2021
7NVJ
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BU of 7nvj by Molmil
Crystal structure of UFC1 Y110A & F121A
分子名称: GLYCEROL, Ubiquitin-fold modifier-conjugating enzyme 1
著者Manoj Kumar, P, Padala, P, Isupov, M.N, Wiener, R.
登録日2021-03-15
公開日2021-09-29
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for UFM1 transfer from UBA5 to UFC1.
Nat Commun, 12, 2021
7NVK
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BU of 7nvk by Molmil
Crystal structure of UBA5 fragment fused to the N-terminus of UFC1
分子名称: Ubiquitin-like modifier-activating enzyme 5,Ubiquitin-fold modifier-conjugating enzyme 1
著者Manoj Kumar, P, Padala, P, Isupov, M.N, Wiener, R.
登録日2021-03-15
公開日2021-09-29
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.651 Å)
主引用文献Structural basis for UFM1 transfer from UBA5 to UFC1.
Nat Commun, 12, 2021
7NVP
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BU of 7nvp by Molmil
Trypanothione reductase from Trypanosoma brucei in complex with N-{4-methoxy-3-[(4-methoxyphenyl)sulfamoyl]phenyl}-5-nitrothiophene-2-carboxamide
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, N(1),N(8)-bis(glutathionyl)spermidine reductase, ...
著者Battista, T, Fiorillo, A, Colotti, G, Ilari, A.
登録日2021-03-15
公開日2022-03-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.153 Å)
主引用文献Optimization of Potent and Specific Trypanothione Reductase Inhibitors: A Structure-Based Drug Discovery Approach.
Acs Infect Dis., 8, 2022
7NW1
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BU of 7nw1 by Molmil
Crystal structure of UFC1 in complex with UBA5
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Manoj Kumar, P, Padala, P, Isupov, M.N, Wiener, R.
登録日2021-03-16
公開日2021-09-29
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural basis for UFM1 transfer from UBA5 to UFC1.
Nat Commun, 12, 2021

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