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Yorodumi- PDB-6yei: Arabidopsis thaliana glutamate dehydrogenase isoform 1 in complex... -
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Open data
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Basic information
| Entry | Database: PDB / ID: 6yei | ||||||
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| Title | Arabidopsis thaliana glutamate dehydrogenase isoform 1 in complex with NAD | ||||||
Components | Glutamate dehydrogenase 1 | ||||||
Keywords | OXIDOREDUCTASE / glutamate dehydrogenase / 2-oxoglutarate / NAD / amino acid metabolism | ||||||
| Function / homology | Function and homology informationresponse to absence of light / glutamate dehydrogenase [NAD(P)+] activity / glutamate dehydrogenase [NAD(P)+] / glutamate dehydrogenase (NAD+) activity / glutamate dehydrogenase (NADP+) activity / amino acid metabolic process / cobalt ion binding / plastid / copper ion binding / mitochondrion ...response to absence of light / glutamate dehydrogenase [NAD(P)+] activity / glutamate dehydrogenase [NAD(P)+] / glutamate dehydrogenase (NAD+) activity / glutamate dehydrogenase (NADP+) activity / amino acid metabolic process / cobalt ion binding / plastid / copper ion binding / mitochondrion / zinc ion binding / ATP binding Similarity search - Function | ||||||
| Biological species | ![]() | ||||||
| Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.02 Å | ||||||
Authors | Ruszkowski, M. / Grzechowiak, M. / Jaskolski, M. | ||||||
| Funding support | Poland, 1items
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Citation | Journal: Front Plant Sci / Year: 2020Title: Structural Studies of Glutamate Dehydrogenase (Isoform 1) FromArabidopsis thaliana, an Important Enzyme at the Branch-Point Between Carbon and Nitrogen Metabolism. Authors: Grzechowiak, M. / Sliwiak, J. / Jaskolski, M. / Ruszkowski, M. | ||||||
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Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
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Downloads & links
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Download
| PDBx/mmCIF format | 6yei.cif.gz | 1.1 MB | Display | PDBx/mmCIF format |
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| PDB format | pdb6yei.ent.gz | 807.6 KB | Display | PDB format |
| PDBx/mmJSON format | 6yei.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Summary document | 6yei_validation.pdf.gz | 5.1 MB | Display | wwPDB validaton report |
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| Full document | 6yei_full_validation.pdf.gz | 5.1 MB | Display | |
| Data in XML | 6yei_validation.xml.gz | 91.4 KB | Display | |
| Data in CIF | 6yei_validation.cif.gz | 126.9 KB | Display | |
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/ye/6yei ftp://data.pdbj.org/pub/pdb/validation_reports/ye/6yei | HTTPS FTP |
-Related structure data
| Related structure data | ![]() 6yehC ![]() 1b26S C: citing same article ( S: Starting model for refinement |
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| Similar structure data | |
| Experimental dataset #1 | Data reference: 10.18150/repod.1477886 / Data set type: diffraction image data |
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Assembly
| Deposited unit | ![]()
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| Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Ens-ID: 1
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X-RAY DIFFRACTION
Poland, 1items
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