- PDB-6swu: Crystal structure of the TPR domain of KLC1 in complex with an en... -
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Basic information
Entry
Database: PDB / ID: 6swu
Title
Crystal structure of the TPR domain of KLC1 in complex with an engineered high-affinity cargo peptide.
Components
Kinesin light chain 1,Kinesin light chain 1,TPR domain of kinesin light chain 1 in complex with an engineered high-affinity cargo peptide of sequence TVFTTEDIYEWDDSAI
Keywords
MOTOR PROTEIN / PROTEIN COMPLEX / PROTEIN ENGINEERING / CARGO RECOGNITION
Function / homology
Function and homology information
kinesin complex / microtubule-based movement / kinesin binding / microtubule / cytoplasm Similarity search - Function
Mass: 37917.391 Da / Num. of mol.: 6 Source method: isolated from a genetically manipulated source Details: aa (1-4) are cloning artifacts. aa (5-296) correspond to residues (205-496) of Uniprot entry Q5UE59 aa (297-327) is an engineered flexible linker. aa (328-343) is an engineered recognition ...Details: aa (1-4) are cloning artifacts. aa (5-296) correspond to residues (205-496) of Uniprot entry Q5UE59 aa (297-327) is an engineered flexible linker. aa (328-343) is an engineered recognition peptide. It is a fusion peptide of short TorsinA, JIP1, and SKIP protein segments. Residues (328-331, TVFT) correspond to residues (321-324) of Uniprot entry O14656. Residues (332-336, TEDIY) correspond to residues (705-709) of Uniprot entry Q9UQF2. Residues (337-343, EWDDSAI) correspond to residues (206-212) of Uniprot entry Q8IWE5. Source: (gene. exp.) Mus musculus (house mouse) / Gene: Klc1, Kns2 / Production host: Escherichia coli (E. coli) / References: UniProt: Q5UE59
Resolution: 2.849→111.325 Å / Cor.coef. Fo:Fc: 0.951 / Cor.coef. Fo:Fc free: 0.933 / SU B: 36.483 / SU ML: 0.304 / Cross valid method: FREE R-VALUE / ESU R Free: 0.355 Details: Hydrogens have been added in their riding positions
Rfactor
Num. reflection
% reflection
Rfree
0.2426
2703
4.707 %
Rwork
0.2015
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all
0.203
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obs
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57431
99.18 %
Solvent computation
Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å