polypeptide N-acetylgalactosaminyltransferase / polypeptide N-acetylgalactosaminyltransferase activity / protein O-linked glycosylation via serine / O-linked glycosylation of mucins / O-glycan processing / protein O-linked glycosylation via threonine / manganese ion binding / carbohydrate binding / Golgi membrane / perinuclear region of cytoplasm ...polypeptide N-acetylgalactosaminyltransferase / polypeptide N-acetylgalactosaminyltransferase activity / protein O-linked glycosylation via serine / O-linked glycosylation of mucins / O-glycan processing / protein O-linked glycosylation via threonine / manganese ion binding / carbohydrate binding / Golgi membrane / perinuclear region of cytoplasm / extracellular exosome / integral component of membrane Similarity search - Function
Resolution: 1.8→73.99 Å / Cor.coef. Fo:Fc: 0.969 / Cor.coef. Fo:Fc free: 0.951 / SU B: 4.767 / SU ML: 0.13 / Cross valid method: THROUGHOUT / ESU R: 0.113 / ESU R Free: 0.119 / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.23806
3699
2.8 %
RANDOM
Rwork
0.18965
-
-
-
obs
0.19092
130063
97.3 %
-
Solvent computation
Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å