Entry Database : PDB / ID : 5nqa Structure visualization Downloads & linksTitle Crystal structure of GalNAc-T4 in complex with the monoglycopeptide 3 ComponentsMonoglycopeptide 3 Polypeptide N-acetylgalactosaminyltransferase 4 DetailsKeywords TRANSFERASE / GalNAc-T4 / GalNAc-T2 / chimeras / Glycosylation preferences / STD-NMR / flexible linkerFunction / homology Function and homology informationFunction Domain/homology Component
protein O-linked glycosylation via threonine / protein O-linked glycosylation via serine / polypeptide N-acetylgalactosaminyltransferase / polypeptide N-acetylgalactosaminyltransferase activity / O-glycan processing / O-linked glycosylation of mucins / protein O-linked glycosylation / manganese ion binding / carbohydrate binding / Golgi membrane ... protein O-linked glycosylation via threonine / protein O-linked glycosylation via serine / polypeptide N-acetylgalactosaminyltransferase / polypeptide N-acetylgalactosaminyltransferase activity / O-glycan processing / O-linked glycosylation of mucins / protein O-linked glycosylation / manganese ion binding / carbohydrate binding / Golgi membrane / perinuclear region of cytoplasm / extracellular exosome Similarity search - Function N-acetylgalactosaminyltransferase / Glycosyltransferase 2-like / Glycosyl transferase family 2 / Ricin-type beta-trefoil lectin domain / Ricin-type beta-trefoil / Lectin domain of ricin B chain profile. / Ricin B, lectin domain / Ricin B-like lectins / Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A / Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A ... N-acetylgalactosaminyltransferase / Glycosyltransferase 2-like / Glycosyl transferase family 2 / Ricin-type beta-trefoil lectin domain / Ricin-type beta-trefoil / Lectin domain of ricin B chain profile. / Ricin B, lectin domain / Ricin B-like lectins / Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A / Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A / Nucleotide-diphospho-sugar transferases / Alpha-Beta Complex / Alpha Beta Similarity search - Domain/homologyBiological species Homo sapiens (human)Method X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution : 1.9 Å DetailsAuthors de las Rivas, M. / Lira-Navarrete, E. / Daniel, E.J.P. / Companon, I. / Coelho, H. / Diniz, A. / Jimenez-Barbero, J. / Peregrina, J.M. / Clausen, H. / Corzana, F. ...de las Rivas, M. / Lira-Navarrete, E. / Daniel, E.J.P. / Companon, I. / Coelho, H. / Diniz, A. / Jimenez-Barbero, J. / Peregrina, J.M. / Clausen, H. / Corzana, F. / Marcelo, F. / Jimenez-Oses, G. / Gerken, T.A. / Hurtado-Guerrero, R. CitationJournal : Nat Commun / Year : 2017Title : The interdomain flexible linker of the polypeptide GalNAc transferases dictates their long-range glycosylation preferences.Authors: Rivas, M.L. / Lira-Navarrete, E. / Daniel, E.J.P. / Companon, I. / Coelho, H. / Diniz, A. / Jimenez-Barbero, J. / Peregrina, J.M. / Clausen, H. / Corzana, F. / Marcelo, F. / Jimenez-Oses, G. ... Authors : Rivas, M.L. / Lira-Navarrete, E. / Daniel, E.J.P. / Companon, I. / Coelho, H. / Diniz, A. / Jimenez-Barbero, J. / Peregrina, J.M. / Clausen, H. / Corzana, F. / Marcelo, F. / Jimenez-Oses, G. / Gerken, T.A. / Hurtado-Guerrero, R. History Deposition Apr 19, 2017 Deposition site : PDBE / Processing site : PDBERevision 1.0 Dec 20, 2017 Provider : repository / Type : Initial releaseRevision 1.1 Jul 29, 2020 Group : Data collection / Derived calculations / Structure summaryCategory : chem_comp / entity ... chem_comp / entity / pdbx_chem_comp_identifier / pdbx_entity_nonpoly / struct_conn / struct_site / struct_site_gen Item : _chem_comp.name / _chem_comp.type ... _chem_comp.name / _chem_comp.type / _entity.pdbx_description / _pdbx_entity_nonpoly.name / _struct_conn.pdbx_role Description : Carbohydrate remediation / Provider : repository / Type : RemediationRevision 1.2 Jan 17, 2024 Group : Data collection / Database references ... Data collection / Database references / Refinement description / Structure summary Category : chem_comp / chem_comp_atom ... chem_comp / chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / struct_ncs_dom_lim Item : _chem_comp.pdbx_synonyms / _database_2.pdbx_DOI ... _chem_comp.pdbx_synonyms / _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_ncs_dom_lim.beg_auth_comp_id / _struct_ncs_dom_lim.beg_label_asym_id / _struct_ncs_dom_lim.beg_label_comp_id / _struct_ncs_dom_lim.beg_label_seq_id / _struct_ncs_dom_lim.end_auth_comp_id / _struct_ncs_dom_lim.end_label_asym_id / _struct_ncs_dom_lim.end_label_comp_id / _struct_ncs_dom_lim.end_label_seq_id
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