- PDB-5lw0: Oryza sativa APL macrodomain in complex with ADP-ribose -
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Open data
ID or keywords:
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Basic information
Entry
Database: PDB / ID: 5lw0
Title
Oryza sativa APL macrodomain in complex with ADP-ribose
Components
Basic helix-loop-helix, putative, expressed
Keywords
ADP-RIBOSE-BINDING PROTEIN / ADP-ribosyltransferase / Interstrand crosslink repair
Function / homology
Function and homology information
purine ribonucleotide metabolic process / DNA 5'-adenosine monophosphate hydrolase activity / adenylylsulfatase activity / sulfur compound metabolic process / DNA repair / DNA binding / nucleus / metal ion binding Similarity search - Function
Resolution: 1.65→56.31 Å / Cor.coef. Fo:Fc: 0.972 / Cor.coef. Fo:Fc free: 0.962 / SU B: 1.788 / SU ML: 0.06 / Cross valid method: THROUGHOUT / ESU R: 0.091 / ESU R Free: 0.091 / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.18727
2344
5 %
RANDOM
Rwork
0.15477
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obs
0.1564
44846
97.16 %
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Solvent computation
Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å