A: DNA-dependent protein kinase catalytic subunit,DNA-dependent Protein Kinase Catalytic Subunit,DNA-dependent protein kinase catalytic subunit K: C-terminal fragment of KU80 (KU80ct194) B: DNA-dependent protein kinase catalytic subunit,DNA-dependent Protein Kinase Catalytic Subunit,DNA-dependent protein kinase catalytic subunit S: C-terminal fragment of KU80 (KU80ct194)
A: DNA-dependent protein kinase catalytic subunit,DNA-dependent Protein Kinase Catalytic Subunit,DNA-dependent protein kinase catalytic subunit K: C-terminal fragment of KU80 (KU80ct194)
B: DNA-dependent protein kinase catalytic subunit,DNA-dependent Protein Kinase Catalytic Subunit,DNA-dependent protein kinase catalytic subunit S: C-terminal fragment of KU80 (KU80ct194)
Mass: 469618.969 Da / Num. of mol.: 2 / Source method: isolated from a natural source / Source: (natural) Homo sapiens (human) / Cell line: HeLa References: UniProt: P78527, non-specific serine/threonine protein kinase
#2: Protein
C-terminalfragmentofKU80 (KU80ct194)
Mass: 16621.318 Da / Num. of mol.: 2 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Homo sapiens (human) / Plasmid: pGAT3 / Production host: Escherichia coli BL21(DE3) (bacteria)
-
Experimental details
-
Experiment
Experiment
Method: X-RAY DIFFRACTION / Number of used crystals: 2
-
Sample preparation
Crystal
ID
Density Matthews (Å3/Da)
Density % sol (%)
1
3.27
62
2
3.27
62
Crystal grow
Temperature (K)
Crystal-ID
Method
Details
PH range
293
1
vapor diffusion, hanging drop
0.1 M Bis-Tris, 200 mM NaCl, 30% glycerol, 10 mM EDTA, 18% PEG 8000
6.2-6.7
293
2
vapor diffusion, hanging drop
0.1 M Bis-Tris, 200 mM NaCl, 30% glycerol, 10 mM EDTA, 8% PEG 8000
6.2-6.7
-
Data collection
Diffraction
ID
Mean temperature (K)
Crystal-ID
1
100
1
2
100
2
Diffraction source
Source
Site
Beamline
ID
Wavelength (Å)
SYNCHROTRON
ESRF
ID29
1
0.9791
SYNCHROTRON
ESRF
ID23-1
2
0.9791
Detector
Type
ID
Detector
Date
DECTRIS PILATUS 6M-F
1
PIXEL
May 23, 2012
DECTRIS PILATUS 6M-F
2
PIXEL
Jun 25, 2011
Radiation
ID
Protocol
Monochromatic (M) / Laue (L)
Scattering type
Wavelength-ID
1
SINGLEWAVELENGTH
M
x-ray
1
2
SINGLEWAVELENGTH
M
x-ray
2
Radiation wavelength
ID
Wavelength (Å)
Relative weight
1
0.97915
1
2
0.9791
1
Reflection
Resolution: 4.3→49.92 Å / Num. obs: 84530 / % possible obs: 99.9 % / Redundancy: 35.2 % / Rmerge(I) obs: 0.16 / Net I/σ(I): 15.4
Reflection shell
Resolution: 4.3→4.41 Å / Redundancy: 13.1 % / Rmerge(I) obs: 0.936 / Mean I/σ(I) obs: 2.4 / % possible all: 99.9
-
Processing
Software
Name
Version
Classification
PHENIX
(1.10_2155: ???)
refinement
XDS
datareduction
XSCALE
datascaling
PHENIX
phasing
Refinement
Method to determine structure: SAD / Resolution: 4.3→49.92 Å / SU ML: 1.12 / Cross valid method: FREE R-VALUE / σ(F): 0 / Phase error: 55.75