- PDB-4jf8: Crystal structure of a TrwG component of type IV secretion system... -
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基本情報
登録情報
データベース: PDB / ID: 4jf8
タイトル
Crystal structure of a TrwG component of type IV secretion system protein from Bartonella birtlesii
要素
TrwG component of type IV secretion system
キーワード
PROTEIN TRANSPORT / Structural Genomics / NIAID / National Institute of Allergy and Infectious Diseases / Seattle Structural Genomics Center for Infectious Disease / SSGCID / cat scratch fever / secretion / host specific adhesion
機能・相同性
機能・相同性情報
protein secretion by the type IV secretion system / membrane => GO:0016020 類似検索 - 分子機能
VirB8 protein / Type IV secretion system protein VirB8/PtlE / Bacterial virulence protein VirB8 / VirB8 protein / NTF2-like domain superfamily / Nuclear Transport Factor 2; Chain: A, / Roll / Alpha Beta 類似検索 - ドメイン・相同性
Type IV secretion system protein virB8 類似検索 - 構成要素
温度: 289 K / 手法: 蒸気拡散法, シッティングドロップ法 / pH: 7 詳細: BabiA.18388.a.B2 PS01693 at 25.7 mg/mL against JCSG+ screen condition A3, 0.2 M citrate, 25% PEG 3350 with 20% ethylene glycol as cryo-protectant, unique puck ID vff2-9, crystal tracking ID ...詳細: BabiA.18388.a.B2 PS01693 at 25.7 mg/mL against JCSG+ screen condition A3, 0.2 M citrate, 25% PEG 3350 with 20% ethylene glycol as cryo-protectant, unique puck ID vff2-9, crystal tracking ID 240866a3, VAPOR DIFFUSION, SITTING DROP, temperature 289K
解像度: 1.35→50 Å / Cor.coef. Fo:Fc: 0.971 / Cor.coef. Fo:Fc free: 0.966 / Occupancy max: 1 / Occupancy min: 0.3 / SU B: 1.555 / SU ML: 0.033 / SU R Cruickshank DPI: 0.052 / 交差検証法: THROUGHOUT / ESU R: 0.052 / ESU R Free: 0.053 / 立体化学のターゲット値: MAXIMUM LIKELIHOOD / 詳細: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
Rfactor
反射数
%反射
Selection details
Rfree
0.17514
1588
5 %
RANDOM
Rwork
0.15426
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obs
0.15528
29908
99.64 %
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溶媒の処理
イオンプローブ半径: 0.8 Å / 減衰半径: 0.8 Å / VDWプローブ半径: 1.2 Å / 溶媒モデル: MASK