登録情報 | データベース: PDB / ID: 3vma |
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タイトル | Crystal Structure of the Full-Length Transglycosylase PBP1b from Escherichia coli |
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要素 | Penicillin-binding protein 1B |
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キーワード | TRANSFERASE / HYDROLASE/ANTIBIOTIC / bacterial cell wall synthesis / penicillin-binding protein / antibiotics design / PBP3 / MipA / MltA / FtsN / Membrane / HYDROLASE-ANTIBIOTIC complex |
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機能・相同性 | 機能・相同性情報
positive regulation of bipolar cell growth / cell wall repair / peptidoglycan glycosyltransferase / peptidoglycan glycosyltransferase activity / serine-type D-Ala-D-Ala carboxypeptidase / serine-type D-Ala-D-Ala carboxypeptidase activity / penicillin binding / peptidoglycan biosynthetic process / peptidoglycan-based cell wall / regulation of cell shape ...positive regulation of bipolar cell growth / cell wall repair / peptidoglycan glycosyltransferase / peptidoglycan glycosyltransferase activity / serine-type D-Ala-D-Ala carboxypeptidase / serine-type D-Ala-D-Ala carboxypeptidase activity / penicillin binding / peptidoglycan biosynthetic process / peptidoglycan-based cell wall / regulation of cell shape / outer membrane-bounded periplasmic space / response to antibiotic / proteolysis / membrane / plasma membrane類似検索 - 分子機能 Penicillin-binding protein 1B / Bifunctional transglycosylase second domain / Transglycosylase PBP1b, N-terminal transmembrane domain / Transmembrane domain of transglycosylase PBP1 at N-terminal / Bifunctional transglycosylase second domain / Penicillin-binding protein 1b fold / Penicillin-binding protein 1b domain / Penicillin binding protein transpeptidase fold / Biosynthetic peptidoglycan transglycosylase-like / Glycosyl transferase, family 51 ...Penicillin-binding protein 1B / Bifunctional transglycosylase second domain / Transglycosylase PBP1b, N-terminal transmembrane domain / Transmembrane domain of transglycosylase PBP1 at N-terminal / Bifunctional transglycosylase second domain / Penicillin-binding protein 1b fold / Penicillin-binding protein 1b domain / Penicillin binding protein transpeptidase fold / Biosynthetic peptidoglycan transglycosylase-like / Glycosyl transferase, family 51 / Penicillin binding protein transglycosylase domain / Transglycosylase / Cytochrome c1, transmembrane anchor, C-terminal / Penicillin-binding protein, transpeptidase / Penicillin binding protein transpeptidase domain / Beta-lactamase / DD-peptidase/beta-lactamase superfamily / Single alpha-helices involved in coiled-coils or other helix-helix interfaces / Beta-lactamase/transpeptidase-like / Lysozyme-like domain superfamily / Up-down Bundle / 2-Layer Sandwich / Orthogonal Bundle / 3-Layer(aba) Sandwich / Mainly Alpha / Alpha Beta類似検索 - ドメイン・相同性 |
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生物種 | ![](img/tx_bacteria.gif) Escherichia coli (大腸菌) |
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手法 | X線回折 / シンクロトロン / 単波長異常分散 / 解像度: 2.161 Å |
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データ登録者 | Huang, C.Y. / Sung, M.T. / Lai, Y.T. / Chou, L.Y. / Shih, H.W. / Cheng, W.C. / Wong, C.H. / Ma, C. |
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引用 | ジャーナル: Proc.Natl.Acad.Sci.USA / 年: 2009 タイトル: Crystal structure of the membrane-bound bifunctional transglycosylase PBP1b from Escherichia coli. 著者: Sung, M.T. / Lai, Y.T. / Huang, C.Y. / Chou, L.Y. / Shih, H.W. / Cheng, W.C. / Wong, C.H. / Ma, C. |
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履歴 | 登録 | 2011年12月9日 | 登録サイト: PDBJ / 処理サイト: PDBJ |
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置き換え | 2012年3月14日 | ID: 3FWM |
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改定 1.0 | 2012年3月14日 | Provider: repository / タイプ: Initial release |
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改定 1.1 | 2023年11月8日 | Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Refinement description カテゴリ: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / struct_ref_seq_dif / struct_site Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_ref_seq_dif.details / _struct_site.pdbx_auth_asym_id / _struct_site.pdbx_auth_comp_id / _struct_site.pdbx_auth_seq_id |
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