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Yorodumi- PDB-2n4c: EC-NMR Structure of Agrobacterium tumefaciens Atu1203 Determined ... -
+Open data
-Basic information
Entry | Database: PDB / ID: 2n4c | ||||||
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Title | EC-NMR Structure of Agrobacterium tumefaciens Atu1203 Determined by Combining Evolutionary Couplings (EC) and Sparse NMR Data. Northeast Structural Genomics Consortium target AtT10 | ||||||
Components | Uncharacterized protein Atu1203 | ||||||
Keywords | STRUCTURAL GENOMICS / UNKNOWN FUNCTION / putative metal-binding domain ATU1203 / EC-NMR / NORTHEAST STRUCTURAL GENOMICS CONSORTIUM / NESG / Protein Structure Initiative / PSI-Biology / Ontario Centre for Structural Proteomics / OCSP | ||||||
Function / homology | Function and homology information | ||||||
Biological species | Agrobacterium fabrum str. C58 (bacteria) | ||||||
Method | SOLUTION NMR / torsion angle dynamics | ||||||
Model details | lowest energy, model1 | ||||||
Authors | Tang, Y. / Huang, Y.J. / Hopf, T.A. / Sander, C. / Marks, D. / Montelione, G.T. / Northeast Structural Genomics Consortium (NESG) / Ontario Centre for Structural Proteomics (OCSP) | ||||||
Citation | Journal: Nat.Methods / Year: 2015 Title: Protein structure determination by combining sparse NMR data with evolutionary couplings. Authors: Tang, Y. / Huang, Y.J. / Hopf, T.A. / Sander, C. / Marks, D.S. / Montelione, G.T. | ||||||
History |
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Remark 0 | THIS ENTRY 2N4C REFLECTS AN ALTERNATIVE MODELING OF THE ORIGINAL STRUCTURAL DATA IN 2K2P DETERMINED ...THIS ENTRY 2N4C REFLECTS AN ALTERNATIVE MODELING OF THE ORIGINAL STRUCTURAL DATA IN 2K2P DETERMINED BY AUTHORS: A.LEMAK,A.GUTMANAS,A.YEE,A.SEMESI,C.H.ARROWSMITH,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) |
-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 2n4c.cif.gz | 337.5 KB | Display | PDBx/mmCIF format |
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PDB format | pdb2n4c.ent.gz | 282.1 KB | Display | PDB format |
PDBx/mmJSON format | 2n4c.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/n4/2n4c ftp://data.pdbj.org/pub/pdb/validation_reports/n4/2n4c | HTTPS FTP |
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-Related structure data
Related structure data | 2n42C 2n44C 2n45C 2n46C 2n47C 2n48C 2n49C 2n4aC 2n4bC 2n4dC 2n4fC C: citing same article (ref.) |
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Similar structure data | |
Other databases |
-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 8766.727 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Agrobacterium fabrum str. C58 (bacteria) Strain: C58 / Gene: Atu1203 / Production host: Escherichia coli (E. coli) / References: UniProt: A9CJD6 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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NMR details | Text: AUTHOR USED THE EXPERIMENTAL DATA FROM ENTRY 2K2P. |
-Processing
NMR software |
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Refinement | Method: torsion angle dynamics / Software ordinal: 1 Details: Protons from the Rosetta models were removed and added back using Reduce. | ||||||||||||||||||||||||
NMR representative | Selection criteria: lowest energy | ||||||||||||||||||||||||
NMR ensemble | Conformer selection criteria: structures with the lowest energy Conformers calculated total number: 100 / Conformers submitted total number: 20 |