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- PDB-2igg: DETERMINATION OF THE SOLUTION STRUCTURES OF DOMAINS II AND III OF... -

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Entry
Database: PDB / ID: 2igg
TitleDETERMINATION OF THE SOLUTION STRUCTURES OF DOMAINS II AND III OF PROTEIN G FROM STREPTOCOCCUS BY 1H NMR
ComponentsPROTEIN G
KeywordsIMMUNOGLOBULIN-BINDING PROTEIN
Function / homology
Function and homology information


Ubiquitin-like (UB roll) - #10 / IgG-binding B / B domain / M protein-type anchor domain / GA-like domain / GA-like domain / Immunoglobulin/albumin-binding domain superfamily / YSIRK Gram-positive signal peptide / LPXTG cell wall anchor motif / Gram-positive cocci surface proteins LPxTG motif profile. ...Ubiquitin-like (UB roll) - #10 / IgG-binding B / B domain / M protein-type anchor domain / GA-like domain / GA-like domain / Immunoglobulin/albumin-binding domain superfamily / YSIRK Gram-positive signal peptide / LPXTG cell wall anchor motif / Gram-positive cocci surface proteins LPxTG motif profile. / LPXTG cell wall anchor domain / Ubiquitin-like (UB roll) / Roll / Alpha Beta
Similarity search - Domain/homology
Immunoglobulin G-binding protein G
Similarity search - Component
Biological speciesStreptococcus sp. GX7805 (bacteria)
MethodSOLUTION NMR
AuthorsLian, L.-Y. / Derrick, J.P. / Sutcliffe, M.J. / Yang, J.C. / Roberts, G.C.K.
Citation
Journal: J.Mol.Biol. / Year: 1992
Title: Determination of the solution structures of domains II and III of protein G from Streptococcus by 1H nuclear magnetic resonance.
Authors: Lian, L.Y. / Derrick, J.P. / Sutcliffe, M.J. / Yang, J.C. / Roberts, G.C.
#1: Journal: Biochemistry / Year: 1991
Title: Sequential 1H NMR Assignments and Secondary Structure of an Igg-Binding Domain from Protein G
Authors: Lian, L.-Y. / Yang, J.C. / Derrick, J.P. / Sutcliffe, M.J. / Roberts, G.C.K. / Murphy, J.P. / Goward, C.R. / Atkinson, T.
History
DepositionAug 26, 1992Processing site: BNL
Revision 1.0Jan 31, 1994Provider: repository / Type: Initial release
Revision 1.1Mar 24, 2008Group: Version format compliance
Revision 1.2Jul 13, 2011Group: Version format compliance
Revision 1.3Mar 9, 2022Group: Database references / Derived calculations / Other
Category: database_2 / pdbx_database_status ...database_2 / pdbx_database_status / pdbx_struct_assembly / pdbx_struct_oper_list
Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_database_status.process_site
Revision 1.4May 29, 2024Group: Data collection / Category: chem_comp_atom / chem_comp_bond

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

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Assembly

Deposited unit
A: PROTEIN G


Theoretical massNumber of molelcules
Total (without water)6,9951
Polymers6,9951
Non-polymers00
Water00
1


  • Idetical with deposited unit
  • defined by author
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Atom site foot note1: THE N-TERMINAL (MET 1 - VAL 5) AND C-TERMINAL (GLU 61 - GLU 64) REGIONS ARE NOT WELL DEFINED.
NMR ensembles
DataCriteria
Number of conformers (submitted / calculated)27 / -
Representative

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Components

#1: Protein PROTEIN G


Mass: 6994.658 Da / Num. of mol.: 1
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Streptococcus sp. GX7805 (bacteria) / References: UniProt: P19909

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Experimental details

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Experiment

ExperimentMethod: SOLUTION NMR

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Processing

Software
NameClassification
X-PLORmodel building
X-PLORrefinement
X-PLORphasing
NMR software
NameDeveloperClassification
DIANAGUNTERT,BRAUN,WUTHRICHrefinement
X-PLORBRUNGERrefinement
NMR ensembleConformers submitted total number: 27

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