登録情報 | データベース: PDB / ID: 1whv |
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タイトル | Solution structure of the RNA binding domain from hypothetical protein BAB23382 |
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要素 | poly(A)-specific ribonuclease |
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キーワード | HYDROLASE / RNA recognition motif / RRM / RNA binding domain / RBD / RNP / poly(A)-specific ribonuclease / PARN / STRUCTURAL GENOMICS / RIKEN Structural Genomics/Proteomics Initiative / RSGI |
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機能・相同性 | 機能・相同性情報
priRNA 3'-end processing / siRNA 3'-end processing / KSRP (KHSRP) binds and destabilizes mRNA / Deadenylation of mRNA / cation binding / box H/ACA sno(s)RNA 3'-end processing / poly(A)-specific ribonuclease / poly(A)-specific ribonuclease activity / miRNA catabolic process / poly(A)-dependent snoRNA 3'-end processing ...priRNA 3'-end processing / siRNA 3'-end processing / KSRP (KHSRP) binds and destabilizes mRNA / Deadenylation of mRNA / cation binding / box H/ACA sno(s)RNA 3'-end processing / poly(A)-specific ribonuclease / poly(A)-specific ribonuclease activity / miRNA catabolic process / poly(A)-dependent snoRNA 3'-end processing / nuclear-transcribed mRNA poly(A) tail shortening / nuclear-transcribed mRNA catabolic process, nonsense-mediated decay / 3'-5'-RNA exonuclease activity / postsynapse / glutamatergic synapse / nucleolus / RNA binding / nucleus / metal ion binding / cytoplasm類似検索 - 分子機能 : / Poly(A)-specific ribonuclease, RNA-binding / PARN, R3H domain / RNA binding domain / Ribonuclease CAF1 / R3H domain / CAF1 family ribonuclease / R3H domain / R3H domain superfamily / R3H domain profile. ...: / Poly(A)-specific ribonuclease, RNA-binding / PARN, R3H domain / RNA binding domain / Ribonuclease CAF1 / R3H domain / CAF1 family ribonuclease / R3H domain / R3H domain superfamily / R3H domain profile. / RRM (RNA recognition motif) domain / RNA-binding domain superfamily / Ribonuclease H superfamily / Ribonuclease H-like superfamily / Nucleotide-binding alpha-beta plait domain superfamily / Alpha-Beta Plaits / 2-Layer Sandwich / Alpha Beta類似検索 - ドメイン・相同性 |
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生物種 | ![](img/tx_mammal.gif) Mus musculus (ハツカネズミ) |
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手法 | 溶液NMR / torsion angle dynamics, simulated annealing |
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データ登録者 | Nagata, T. / Muto, Y. / Inoue, M. / Kigawa, T. / Terada, T. / Shirouzu, M. / Yokoyama, S. / RIKEN Structural Genomics/Proteomics Initiative (RSGI) |
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引用 | ジャーナル: To be Published タイトル: Solution structure of the RNA binding domain from hypothetical protein BAB23382 著者: Nagata, T. / Muto, Y. / Inoue, M. / Kigawa, T. / Terada, T. / Shirouzu, M. / Yokoyama, S. |
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履歴 | 登録 | 2004年5月28日 | 登録サイト: PDBJ / 処理サイト: PDBJ |
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改定 1.0 | 2004年11月28日 | Provider: repository / タイプ: Initial release |
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改定 1.1 | 2008年4月30日 | Group: Version format compliance |
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改定 1.2 | 2011年7月13日 | Group: Version format compliance |
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改定 1.3 | 2022年3月2日 | Group: Data collection / Database references / Derived calculations カテゴリ: database_2 / pdbx_nmr_software ...database_2 / pdbx_nmr_software / pdbx_nmr_spectrometer / pdbx_struct_assembly / pdbx_struct_oper_list / struct_ref_seq_dif Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_nmr_software.name / _pdbx_nmr_spectrometer.model / _struct_ref_seq_dif.details |
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改定 1.4 | 2024年5月29日 | Group: Data collection / カテゴリ: chem_comp_atom / chem_comp_bond |
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