+Open data
-Basic information
Entry | Database: PDB / ID: 1pv0 | ||||||
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Title | Structure of the Sda antikinase | ||||||
Components | Sda | ||||||
Keywords | SIGNALING PROTEIN / Sda / KinA / antikinase / histidine kinase / sporulation phosphorelay | ||||||
Function / homology | Function and homology information sporulation resulting in formation of a cellular spore / protein kinase inhibitor activity Similarity search - Function | ||||||
Biological species | Bacillus subtilis (bacteria) | ||||||
Method | SOLUTION NMR / torsion angle dynamics, simulated annealing | ||||||
Authors | Rowland, S.L. / Burkholder, W.F. / Maciejewski, M.W. / Grossman, A.D. / King, G.F. | ||||||
Citation | Journal: Mol.Cell / Year: 2004 Title: Structure and mechanism of Sda: an inhibitor of the histidine kinases that regulate initiation of sporulation in Bacillus subtilis Authors: Rowland, S.L. / Burkholder, W.F. / Cunningham, K.A. / Maciejewski, M.W. / Grossman, A.D. / King, G.F. #1: Journal: Cell(Cambridge,Mass.) / Year: 2001 Title: Replication initiation proteins regulate a developmental checkpoint in Bacillus subtilis Authors: Burkholder, W.F. / Kurster, I. / Grossman, A.D. | ||||||
History |
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Remark 650 | HELIX DETERMINATION METHOD: AUTHOR DETERMINED | ||||||
Remark 999 | SEQUENCE The sequence of this protein is not available in any reference sequence database |
-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1pv0.cif.gz | 370.6 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1pv0.ent.gz | 323.2 KB | Display | PDB format |
PDBx/mmJSON format | 1pv0.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/pv/1pv0 ftp://data.pdbj.org/pub/pdb/validation_reports/pv/1pv0 | HTTPS FTP |
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-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein/peptide | Mass: 5448.279 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Bacillus subtilis (bacteria) / Gene: sda / Plasmid: pSLR65 / Production host: Escherichia coli (E. coli) / Strain (production host): BL21(lambda DE3) / References: UniProt: Q7WY62 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||||||||||||||||||||||||||
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NMR experiment |
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NMR details | Text: The structure was determined using triple-resonance NMR spectroscopy. |
-Sample preparation
Details |
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Sample conditions |
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-NMR measurement
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M | |||||||||||||||
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Radiation wavelength | Relative weight: 1 | |||||||||||||||
NMR spectrometer |
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-Processing
NMR software |
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Refinement | Method: torsion angle dynamics, simulated annealing / Software ordinal: 1 | ||||||||||||||||
NMR representative | Selection criteria: lowest energy | ||||||||||||||||
NMR ensemble | Conformer selection criteria: Structures with lowest energy and least restraint violations Conformers calculated total number: 50 / Conformers submitted total number: 25 |