[English] 日本語
![](img/lk-miru.gif)
- PDB-1cpc: ISOLATION, CRYSTALLIZATION, CRYSTAL STRUCTURE ANALYSIS AND REFINE... -
+
Open data
-
Basic information
Entry | Database: PDB / ID: 1cpc | ||||||
---|---|---|---|---|---|---|---|
Title | ISOLATION, CRYSTALLIZATION, CRYSTAL STRUCTURE ANALYSIS AND REFINEMENT OF CONSTITUTIVE C-PHYCOCYANIN FROM THE CHROMATICALLY ADAPTING CYANOBACTERIUM FREMYELLA DIPLOSIPHON AT 1.66 ANGSTROMS RESOLUTION | ||||||
![]() |
| ||||||
![]() | LIGHT HARVESTING PROTEIN | ||||||
Function / homology | ![]() : / phycobilisome / plasma membrane-derived thylakoid membrane / photosynthesis Similarity search - Function | ||||||
Biological species | ![]() | ||||||
Method | ![]() | ||||||
![]() | Duerring, M. / Schmidt, G.B. / Huber, R. | ||||||
![]() | ![]() Title: Isolation, crystallization, crystal structure analysis and refinement of constitutive C-phycocyanin from the chromatically adapting cyanobacterium Fremyella diplosiphon at 1.66 A resolution. Authors: Duerring, M. / Schmidt, G.B. / Huber, R. | ||||||
History |
|
-
Structure visualization
Structure viewer | Molecule: ![]() ![]() |
---|
-
Downloads & links
-
Download
PDBx/mmCIF format | ![]() | 144.1 KB | Display | ![]() |
---|---|---|---|---|
PDB format | ![]() | 114.7 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 761.8 KB | Display | ![]() |
---|---|---|---|---|
Full document | ![]() | 788.6 KB | Display | |
Data in XML | ![]() | 19.8 KB | Display | |
Data in CIF | ![]() | 28.4 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data |
---|
-
Links
-
Assembly
Deposited unit | ![]()
| ||||||||
---|---|---|---|---|---|---|---|---|---|
1 | ![]()
| ||||||||
2 | ![]()
| ||||||||
3 | ![]()
| ||||||||
4 | ![]()
| ||||||||
5 | ![]()
| ||||||||
6 |
| ||||||||
Unit cell |
|
-
Components
#1: Protein | Mass: 17243.271 Da / Num. of mol.: 2 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() #2: Protein | Mass: 17950.377 Da / Num. of mol.: 2 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() #3: Chemical | ChemComp-CYC / #4: Water | ChemComp-HOH / | |
---|
-Experimental details
-Experiment
Experiment | Method: ![]() |
---|
-
Sample preparation
Crystal | Density Matthews: 2.72 Å3/Da / Density % sol: 54.79 % | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Crystal grow | *PLUS pH: 5 / Method: vapor diffusion | ||||||||||||||||||||
Components of the solutions | *PLUS
|
-Data collection
Radiation | Scattering type: x-ray |
---|---|
Radiation wavelength | Relative weight: 1 |
Reflection | *PLUS Highest resolution: 1.66 Å / Num. obs: 70981 / Num. measured all: 176017 / Rmerge(I) obs: 0.089 |
Reflection shell | *PLUS Highest resolution: 1.66 Å / Lowest resolution: 1.75 Å / % possible obs: 29.1 % |
-
Processing
Software | Name: EREF / Classification: refinement | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Refinement | Rfactor Rwork: 0.181 / Highest resolution: 1.66 Å | ||||||||||||
Refinement step | Cycle: LAST / Highest resolution: 1.66 Å
| ||||||||||||
Refine LS restraints |
| ||||||||||||
Software | *PLUS Name: EREF / Classification: refinement | ||||||||||||
Refinement | *PLUS Lowest resolution: 8 Å / Rfactor Rwork: 0.181 | ||||||||||||
Solvent computation | *PLUS | ||||||||||||
Displacement parameters | *PLUS | ||||||||||||
Refine LS restraints | *PLUS Type: o_angle_d / Dev ideal: 2.33 |