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- PDB-1bhb: Three-dimensional structure of (1-71) bacterioopsin solubilized i... -

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Entry
Database: PDB / ID: 1bhb
TitleThree-dimensional structure of (1-71) bacterioopsin solubilized in methanol-chloroform and SDS micelles determined by 15N-1H heteronuclear NMR spectroscopy
ComponentsBACTERIORHODOPSIN
KeywordsPHOTORECEPTOR
Function / homology
Function and homology information


light-driven active monoatomic ion transmembrane transporter activity / monoatomic ion channel activity / photoreceptor activity / phototransduction / proton transmembrane transport / plasma membrane
Similarity search - Function
Helix Hairpins - #170 / Bacterial rhodopsins retinal binding site. / Bacterial rhodopsins signature 1. / Rhodopsin, retinal binding site / Bacteriorhodopsin-like protein / Archaeal/bacterial/fungal rhodopsins / Bacteriorhodopsin-like protein / Helix Hairpins / Orthogonal Bundle / Mainly Alpha
Similarity search - Domain/homology
Biological speciesHalobacterium salinarum (Halophile)
MethodSOLUTION NMR
AuthorsOrekhov, V.Y. / Pervushin, K.V. / Popov, A.I. / Musina, L.Y. / Arseniev, A.S.
Citation
Journal: Eur.J.Biochem. / Year: 1994
Title: Three-dimensional structure of (1-71)bacterioopsin solubilized in methanol/chloroform and SDS micelles determined by 15N-1H heteronuclear NMR spectroscopy.
Authors: Pervushin, K.V. / Orekhov, V.Y.u. / Popov, A.I. / Musina, L.Y.u. / Arseniev, A.S.
#1: Journal: J.Biomol.NMR / Year: 1992
Title: Sequence-Specific Resonance Assignment, Secondary Structure of (1-71) Bacterioopsin
Authors: Sobol, A.G. / Arseniev, A.S. / Abdulaeva, G.V. / Musina, L.Y. / Bystrov, V.F.
#2: Journal: FEBS Lett. / Year: 1992
Title: Three-Dimensional Structure of (1-36) Bacterioopsin in Methanol-Chloroform Mixture, Sds Determined by 2D H-NMR Spectroscopy
Authors: Pervushin, K.V. / Arseniev, A.S.
#3: Journal: J.Biomol.NMR / Year: 1992
Title: Spatial Structure of (34-65) Bacterioopsin Polypeptide in Sds Micelles Determined from Nuclear Magnetic Resonance Data
Authors: Lomize, A.L. / Pervushin, K.V. / Arseniev, A.S.
History
DepositionOct 11, 1993Processing site: BNL
Revision 1.0Jan 31, 1994Provider: repository / Type: Initial release
Revision 1.1Mar 24, 2008Group: Version format compliance
Revision 1.2Jul 13, 2011Group: Version format compliance
Revision 1.3Feb 16, 2022Group: Database references / Derived calculations / Other
Category: database_2 / pdbx_database_status ...database_2 / pdbx_database_status / pdbx_struct_assembly / pdbx_struct_oper_list
Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_database_status.process_site
Revision 1.4May 22, 2024Group: Data collection / Category: chem_comp_atom / chem_comp_bond

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Structure viewerMolecule:
MolmilJmol/JSmol

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Assembly

Deposited unit
A: BACTERIORHODOPSIN


Theoretical massNumber of molelcules
Total (without water)7,7661
Polymers7,7661
Non-polymers00
Water00
1


  • Idetical with deposited unit
  • defined by author
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
NMR ensembles
DataCriteria
Number of conformers (submitted / calculated)12 / -
Representative

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Components

#1: Protein BACTERIORHODOPSIN


Mass: 7766.273 Da / Num. of mol.: 1
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Halobacterium salinarum (Halophile) / References: UniProt: P02945

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Experimental details

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Experiment

ExperimentMethod: SOLUTION NMR

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Sample preparation

Crystal grow
*PLUS
Method: other / Details: NMR

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Processing

NMR ensembleConformers submitted total number: 12

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