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- EMDB-22090: Vigna radiata mitochondrial complex I* -

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Basic information

Entry
Database: EMDB / ID: EMD-22090
TitleVigna radiata mitochondrial complex I*
Map dataComposite map of Vigna radiata mitochondrial complex I* from the combination of locally refined maps of the membrane arm and peripheral arm. Composite map was generated using PHENIX.
Sample
  • Complex: Vigna radiata complex I*
    • Protein or peptide: x 34 types
  • Ligand: x 6 types
Function / homology
Function and homology information


oxidoreductase activity, acting on NAD(P)H / NADH:ubiquinone reductase (H+-translocating) / mitochondrial respiratory chain complex I assembly / mitochondrial electron transport, NADH to ubiquinone / electron transport chain / NADH dehydrogenase (ubiquinone) activity / quinone binding / ATP synthesis coupled electron transport / respirasome / catalytic activity ...oxidoreductase activity, acting on NAD(P)H / NADH:ubiquinone reductase (H+-translocating) / mitochondrial respiratory chain complex I assembly / mitochondrial electron transport, NADH to ubiquinone / electron transport chain / NADH dehydrogenase (ubiquinone) activity / quinone binding / ATP synthesis coupled electron transport / respirasome / catalytic activity / respiratory electron transport chain / 2 iron, 2 sulfur cluster binding / NAD binding / FMN binding / 4 iron, 4 sulfur cluster binding / mitochondrial inner membrane / membrane => GO:0016020 / oxidoreductase activity / mitochondrion / RNA binding / membrane / metal ion binding
Similarity search - Function
NADH-ubiquinone oxidoreductase, 21kDa subunit, N-terminal / NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit / Hexapeptide repeat of succinyl-transferase / Soluble ligand binding domain / NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex subunit 1 / NADH-ubiquinone oxidoreductase MWFE subunit / SLBB domain / Zinc finger, CHCC-type / Zinc-finger domain / Hexapeptide repeat ...NADH-ubiquinone oxidoreductase, 21kDa subunit, N-terminal / NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit / Hexapeptide repeat of succinyl-transferase / Soluble ligand binding domain / NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex subunit 1 / NADH-ubiquinone oxidoreductase MWFE subunit / SLBB domain / Zinc finger, CHCC-type / Zinc-finger domain / Hexapeptide repeat / GRIM-19 / GRIM-19 protein / NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamily / NADH dehydrogenase ubiquinone Fe-S protein 4 / NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial / NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2 / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 / NADH ubiquinone oxidoreductase subunit NDUFA12 / Bacterial transferase hexapeptide (six repeats) / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 / ETC complex I subunit conserved region / NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 6 / NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 8 / NADH-quinone oxidoreductase, chain G, C-terminal / NADH-ubiquinone oxidoreductase subunit G, C-terminal / Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. / NADH-ubiquinone oxidoreductase, 20 Kd subunit / NADH-quinone oxidoreductase, chain I / NADH:ubiquinone oxidoreductase, subunit G / Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. / Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. / NADH ubiquinone oxidoreductase, F subunit / Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. / NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site / NADH-ubiquinone oxidoreductase-G iron-sulfur binding region / NADH-ubiquinone oxidoreductase-G iron-sulfur binding region / Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. / Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. / Trimeric LpxA-like superfamily / CHCH / NuoE domain / CHCH domain / NADH-quinone oxidoreductase subunit E-like / NADH-quinone oxidoreductase subunit E, N-terminal / NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding / His(Cys)3-ligated-type [4Fe-4S] domain profile. / NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site / Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. / NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain / NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain / NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily / NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily / Respiratory-chain NADH dehydrogenase 51 Kd subunit / NADH-ubiquinone oxidoreductase-F iron-sulfur binding region / NADH-ubiquinone oxidoreductase-F iron-sulfur binding region / Molybdopterin oxidoreductase, 4Fe-4S domain / Prokaryotic molybdopterin oxidoreductases 4Fe-4S domain profile. / NAD-dependent epimerase/dehydratase / NAD dependent epimerase/dehydratase family / NADH:ubiquinone oxidoreductase-like, 20kDa subunit / NADH ubiquinone oxidoreductase, 20 Kd subunit / Molybdopterin oxidoreductase / Molybdopterin oxidoreductase / Ribosomal protein/NADH dehydrogenase domain / Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain / Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain / 4Fe-4S dicluster domain / 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. / 2Fe-2S ferredoxin-type iron-sulfur binding domain / 2Fe-2S ferredoxin-like superfamily / 4Fe-4S ferredoxin, iron-sulphur binding, conserved site / 4Fe-4S ferredoxin-type iron-sulfur binding region signature. / 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. / 4Fe-4S ferredoxin-type, iron-sulphur binding domain / RNA recognition motif / RNA recognition motif / Eukaryotic RNA Recognition Motif (RRM) profile. / RNA recognition motif domain / RNA-binding domain superfamily / Thioredoxin-like superfamily / Nucleotide-binding alpha-beta plait domain superfamily / NAD(P)-binding domain superfamily
Similarity search - Domain/homology
uncharacterized protein LOC106754061 / uncharacterized protein At2g27730, mitochondrial / serine/arginine-rich-splicing factor SR34 isoform X2 / NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 / probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial / gamma carbonic anhydrase 1, mitochondrial-like / NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial / NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial ...uncharacterized protein LOC106754061 / uncharacterized protein At2g27730, mitochondrial / serine/arginine-rich-splicing factor SR34 isoform X2 / NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 / probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial / gamma carbonic anhydrase 1, mitochondrial-like / NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial / NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial / gamma carbonic anhydrase-like 2, mitochondrial / NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial / uncharacterized protein LOC106767534 / uncharacterized protein LOC106768957 / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-A / NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial isoform X1 / NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial / uncharacterized protein LOC106775330 / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 / gamma carbonic anhydrase 1, mitochondrial / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B / NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial / NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6
Similarity search - Component
Biological speciesVigna radiata (mung bean) / mung bean (mung bean) / Mung bean (mung bean)
Methodsingle particle reconstruction / cryo EM / Resolution: 3.9 Å
AuthorsLetts JA / Maldonado M / Padavannil A / Zhou L / Guo F
CitationJournal: Elife / Year: 2020
Title: Atomic structure of a mitochondrial complex I intermediate from vascular plants.
Authors: Maria Maldonado / Abhilash Padavannil / Long Zhou / Fei Guo / James A Letts /
Abstract: Respiration, an essential metabolic process, provides cells with chemical energy. In eukaryotes, respiration occurs via the mitochondrial electron transport chain (mETC) composed of several large ...Respiration, an essential metabolic process, provides cells with chemical energy. In eukaryotes, respiration occurs via the mitochondrial electron transport chain (mETC) composed of several large membrane-protein complexes. Complex I (CI) is the main entry point for electrons into the mETC. For plants, limited availability of mitochondrial material has curbed detailed biochemical and structural studies of their mETC. Here, we present the cryoEM structure of the known CI assembly intermediate CI* from at 3.9 Å resolution. CI* contains CI's NADH-binding and CoQ-binding modules, the proximal-pumping module and the plant-specific γ-carbonic-anhydrase domain (γCA). Our structure reveals significant differences in core and accessory subunits of the plant complex compared to yeast, mammals and bacteria, as well as the details of the γCA domain subunit composition and membrane anchoring. The structure sheds light on differences in CI assembly across lineages and suggests potential physiological roles for CI* beyond assembly.
History
DepositionJun 1, 2020-
Header (metadata) releaseSep 2, 2020-
Map releaseSep 2, 2020-
UpdateSep 2, 2020-
Current statusSep 2, 2020Processing site: RCSB / Status: Released

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Structure visualization

Movie
  • Surface view with section colored by density value
  • Surface level: 6.5
  • Imaged by UCSF Chimera
  • Download
  • Surface view colored by height
  • Surface level: 6.5
  • Imaged by UCSF Chimera
  • Download
  • Surface view with fitted model
  • Atomic models: PDB-6x89
  • Surface level: 6.5
  • Imaged by UCSF Chimera
  • Download
Movie viewer
Structure viewerEM map:
SurfViewMolmilJmol/JSmol
Supplemental images

Downloads & links

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Map

FileDownload / File: emd_22090.map.gz / Format: CCP4 / Size: 512 MB / Type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
AnnotationComposite map of Vigna radiata mitochondrial complex I* from the combination of locally refined maps of the membrane arm and peripheral arm. Composite map was generated using PHENIX.
Voxel sizeX=Y=Z: 0.8332 Å
Density
Contour LevelBy AUTHOR: 6.5 / Movie #1: 6.5
Minimum - Maximum-24.12702 - 59.245678
Average (Standard dev.)-0.0004901062 (±1.0816678)
SymmetrySpace group: 1
Details

EMDB XML:

Map geometry
Axis orderZYX
Origin000
Dimensions512512512
Spacing512512512
CellA=B=C: 426.5984 Å
α=β=γ: 90.0 °

CCP4 map header:

modeImage stored as Reals
Å/pix. X/Y/Z0.833199218750.833199218750.83319921875
M x/y/z512512512
origin x/y/z0.0000.0000.000
length x/y/z426.598426.598426.598
α/β/γ90.00090.00090.000
start NX/NY/NZ000
NX/NY/NZ512512512
MAP C/R/S321
start NC/NR/NS000
NC/NR/NS512512512
D min/max/mean-24.12759.246-0.000

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Supplemental data

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Sample components

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Entire : Vigna radiata complex I*

EntireName: Vigna radiata complex I*
Components
  • Complex: Vigna radiata complex I*
    • Protein or peptide: Unknown Peptide
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6
    • Protein or peptide: NDUA7
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial isoform X1
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
    • Protein or peptide: NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial
    • Protein or peptide: NDUS2
    • Protein or peptide: NDUS3
    • Protein or peptide: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
    • Protein or peptide: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial
    • Protein or peptide: NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial
    • Protein or peptide: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial
    • Protein or peptide: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
    • Protein or peptide: NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial
    • Protein or peptide: NU1M
    • Protein or peptide: NU2M
    • Protein or peptide: NU3M
    • Protein or peptide: NU4L
    • Protein or peptide: NU6M
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1
    • Protein or peptide: uncharacterized protein LOC106754061
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B
    • Protein or peptide: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-A
    • Protein or peptide: Unknown Peptide
    • Protein or peptide: Unknown Peptide
    • Protein or peptide: NDUC2
    • Protein or peptide: Protein At2g27730, mitochondrial
    • Protein or peptide: serine/arginine-rich-splicing factor SR34 isoform X2
    • Protein or peptide: NDUX1
    • Protein or peptide: gamma carbonic anhydrase 1, mitochondrial
    • Protein or peptide: gamma carbonic anhydrase 1, mitochondrial-like
    • Protein or peptide: gamma carbonic anhydrase-like 2, mitochondrial
  • Ligand: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
  • Ligand: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
  • Ligand: IRON/SULFUR CLUSTERIron–sulfur cluster
  • Ligand: FE2/S2 (INORGANIC) CLUSTER
  • Ligand: ZINC ION
  • Ligand: FLAVIN MONONUCLEOTIDE

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Supramolecule #1: Vigna radiata complex I*

SupramoleculeName: Vigna radiata complex I* / type: complex / ID: 1 / Parent: 0 / Macromolecule list: #1-#34
Details: Complex I 800 kDa assembly intermediate (complex I*)
Source (natural)Organism: Vigna radiata (mung bean)
Molecular weightTheoretical: 800 KDa

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Macromolecule #1: Unknown Peptide

MacromoleculeName: Unknown Peptide / type: protein_or_peptide / ID: 1 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: mung bean (mung bean)
Molecular weightTheoretical: 1.549902 KDa
SequenceString:
(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)

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Macromolecule #2: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
type: protein_or_peptide / ID: 2 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 10.884632 KDa
SequenceString:
MAWRGQLSKN IKELRFLMCQ SSSASASARA FVEKNYKELK TLNPKLPILI RECSGVEPQL WARYDLGVEK AIKLEGLSEA QISKALEDL AKAGQSSKA

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Macromolecule #3: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mit...

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial
type: protein_or_peptide / ID: 3 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 18.977604 KDa
SequenceString:
MFLRAVARPL MAKVKASTGI VGLEVVPNAR EVLIGLYSKT LKEIQKVPED EGYRKAVESF TKHRLSVCKE EEDWEAIEKR LGCGQVEEL IEEAQDELKL ISYMIEWDPW GVPDDYECEV IENDAPVPKH VPLHRPPPLP TEFHKTLEAL SSQSGKDIPG A SSTESPSK T

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Macromolecule #4: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6
type: protein_or_peptide / ID: 4 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 14.920034 KDa
SequenceString:
MASALRNVKV LPNSASVEEA RQRVFDFFRA TCRSLPSVME IYNLYDVTSV AQLRSTVASE IRKNIGVSDP KVIDMLLFKG MEELMNVVN HSKQRHHIIG QYVVGQQGQV QDSASKDPAI SPFLKNFYSS NYF

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Macromolecule #5: NDUA7

MacromoleculeName: NDUA7 / type: protein_or_peptide / ID: 5 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 14.356376 KDa
SequenceString:
MAKSASNSLV QTLKRYIKKP WEITGPCADP EYRSAVPLAT EYRLQCPATT KEKPCIPNSL PETVYDIKYF SRDQRRNRPP IRRTVLKKA DVEKLAKEQT FAVSDFPPVY LNSAVEEDIN AIGGGYQG

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Macromolecule #6: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mit...

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial isoform X1
type: protein_or_peptide / ID: 6 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 43.781504 KDa
SequenceString: MQTIARRLGH QSLKSSTSIR AIYPISDHHY VADHQRYVST IATKGVGHLV RKGTGGRSSV SGIIATVFGA TGFLGRYVVQ QLAKMGSQV LVPFRGSEDC PRHLKLMGDL GQIVPMKYNP RDESSVKAVM AKANVVINLI GRDYETRNYS FEEVHYHMAE N LAKISREH ...String:
MQTIARRLGH QSLKSSTSIR AIYPISDHHY VADHQRYVST IATKGVGHLV RKGTGGRSSV SGIIATVFGA TGFLGRYVVQ QLAKMGSQV LVPFRGSEDC PRHLKLMGDL GQIVPMKYNP RDESSVKAVM AKANVVINLI GRDYETRNYS FEEVHYHMAE N LAKISREH GGILRFIQVS CLGASPSSPS RMLRAKAAAE EVVLRELPEA TILKPAVMIG TEDRILNPWA HFAKKYGFIP LF GNGSTKI QPVYVVDVAA ALTTVLKDDG TSMGKTYELG GPEIFTVHDL AELMYETIRE WPRYVKVPFP IAKALATPRE ILL NKVPFP LPTPEILNLD KIQALTTDTI VSENALTFND LGIIPHKLKG YPVEFLISYR KGGPQFGSTI SERVTPDAWP

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Macromolecule #7: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
type: protein_or_peptide / ID: 7 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 18.192482 KDa
SequenceString:
MASVVKNVLK SIREKGFGTF LRELKDEGYL RCLPDGNLLQ TKIHNIGATL VGVDKFGNKY YEKLGDTQYG RHRWVEYAEK SRYNASQVP PEWHGWLHFI TDHTGDELLL LKPKRYGVEH KENLSGEGEQ YIYHSKGHAL NPGQRDWTRY QPWESKA

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Macromolecule #8: NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial

MacromoleculeName: NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial
type: protein_or_peptide / ID: 8 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 81.434219 KDa
SequenceString: MGFGLLASKA LRPTSRLLLS SQNPTIFLRT IVSKPQLCNP EASAAQPAQP PPVDLPPRSP LAGARVHFAN PDDAIEVFVD GYPVKIPKG MTVLQACEVA GVDIPRFCYH SRLSIAGNCR MCLVEVEKSP KPVASCAMPA LPGMKIKTDT PVAKKAREGV M EFLLMNHP ...String:
MGFGLLASKA LRPTSRLLLS SQNPTIFLRT IVSKPQLCNP EASAAQPAQP PPVDLPPRSP LAGARVHFAN PDDAIEVFVD GYPVKIPKG MTVLQACEVA GVDIPRFCYH SRLSIAGNCR MCLVEVEKSP KPVASCAMPA LPGMKIKTDT PVAKKAREGV M EFLLMNHP LDCPICDQGG ECDLQDQSMA FGSDRGRFTE VKRSVVDKNL GPLVKTVMTR CIQCTRCVRF ATEVAGVQDL GM LGRGSGE EIGTYVEKLL TSELSGNVID ICPVGALTSK PFAFKARNWE LKGTETIDVT DAVGSNIRID SRGPEVMRIV PRL NEDINE EWISDKTRFC YDGLKRQRLN DPMIRGPDGR FKAVNWRDAL SVIADIAHQV KPEEIVGVAG KLSDAESMIA LKDF LNRMG SNDVWGEGIG VNTNADFRSG YIMNTSIAGL EKADVFLLVG TQPRVEAAMV NARIRKTVRS NQAKVGYIGP ATDFN YDHK HLGTDPQTLV EIAEGRHPFF KTLSDAKNPV IIVGAGVFER KDQDAIFAAV ETIAQKANVV RPDWNGLNVL LLHAAQ AAA LDLGLVPQSE KSLESAKFVY LMGADDVNLD KIPDDAFVVY QGHHGDKSVY RANVILPTAA FSEKEGTYQN TEGCTQQ TL PAVPTVGDSR DDWKIIRALS EVAGVRLPYD TIGAVRARIR NVAPNLVNVD EREPATLPSS LRPSFTQKVD TTPFGTVI E NFYMTDAITR ASKIMAQCSA TLLKK

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Macromolecule #9: NDUS2

MacromoleculeName: NDUS2 / type: protein_or_peptide / ID: 9 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: mung bean (mung bean)
Molecular weightTheoretical: 44.813281 KDa
SequenceString: MTTRNGQIKN FTSNFGPQHP AAHGVLRSVL EMNGEVVERA EPHIGLLHRG TEKLIEYKTY LQALPYFDRL DYVSTMAQEH AYSLAVERL LNCEVPLRAQ YIRVLFCEIT RILNHLLALT THAMDVGAST PSLWAFEERE KLLEFYERVS GARMHASFIR P GGVAQDLP ...String:
MTTRNGQIKN FTSNFGPQHP AAHGVLRSVL EMNGEVVERA EPHIGLLHRG TEKLIEYKTY LQALPYFDRL DYVSTMAQEH AYSLAVERL LNCEVPLRAQ YIRVLFCEIT RILNHLLALT THAMDVGAST PSLWAFEERE KLLEFYERVS GARMHASFIR P GGVAQDLP LGLCRDIDSF TQQFASRIDE LEEMLTGNRI WKQRLVDIGT VTAQQAKDWG FSGVMLRGPG VCWDLRRAAP YD VYDQLDF DVPVGTRGDC YDRYCIRIEE MRQSMRIIWQ CPNKIPSGMI KADDRKLCPP SRCRMKLSME SSIHHFELYT EGF SVPAPS TYTAVEAPKG EFGVFLVSNG SNRPYRCKIR APGFAHLQGL DFMSKHHMLA DVVTIIGTQD IVSGEVDR

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Macromolecule #10: NDUS3

MacromoleculeName: NDUS3 / type: protein_or_peptide / ID: 10 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: mung bean (mung bean)
Molecular weightTheoretical: 22.806779 KDa
SequenceString:
MDNQSIFKYS WETLPKKWVK KMERSEHGNR FDTKTDYLFQ LLCFLKLHTY TRVQVLIDIC GVDYPSRKRR FEVVYNLLST RYNSRIRVQ TSADEVTRIS SVVSLFPSAG WWEREVWDMF GVSSINHPDL RRILTDYGFE GHPLRKDFPL SGYVEVRYDD P EKRVVSEP IEMTQEFRYF DFASPWEQRS DG

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Macromolecule #11: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial

MacromoleculeName: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial
type: protein_or_peptide / ID: 11 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 16.435736 KDa
SequenceString:
MANTLQRALR ATMARRFSTQ ALVETKPGEI GMVSGIPQEH LRRRVVIYSP ARTASQQGSG KVGRWKINFL STQKWENPLM GWTSTGDPY AHVGDSALTF DSAEAAKAFA EKHGWEYSVK KRHTPLLKVK SYADNFKWKG FPKPAEE

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Macromolecule #12: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial

MacromoleculeName: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial
type: protein_or_peptide / ID: 12 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 11.582296 KDa
SequenceString:
MASSVLRNLM RFSSPRNTST RSFSLVTSQI SNHTAKWMQD TSKKSPMELI NEVPPIKVEG RIVACEGDTN PALGHPIEFI CLDLPEPAV CKYCGLRYVQ DHHH

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Macromolecule #13: NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial

MacromoleculeName: NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial
type: protein_or_peptide / ID: 13 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 23.710473 KDa
SequenceString: MALLSRASSR IYQVHSYQRA LSLHTTLPAL NASTSTHTPT PYAPPPPPSA SSPVGVSKAA EFVISKVDDL MNWARRGSIW PMTFGLACC AVEMMHTGAA RYDLDRFGII FRPSPRQSDC MIVAGTLTNK MAPALRKVYD QMPEPRWVIS MGSCANGGGY Y HYSYSVVR ...String:
MALLSRASSR IYQVHSYQRA LSLHTTLPAL NASTSTHTPT PYAPPPPPSA SSPVGVSKAA EFVISKVDDL MNWARRGSIW PMTFGLACC AVEMMHTGAA RYDLDRFGII FRPSPRQSDC MIVAGTLTNK MAPALRKVYD QMPEPRWVIS MGSCANGGGY Y HYSYSVVR GCDRIVPVDI YVPGCPPTAE ALLYGLLQLQ KKINRRKDFL HWWTK

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Macromolecule #14: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial

MacromoleculeName: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial
type: protein_or_peptide / ID: 14 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 25.54501 KDa
SequenceString: MAAILARKSL LALRARQLAV SGQGLHSSQS YGLRLSAHSF STKLEDEQRE QLAKEISKDW SSVFERSINT LFLTEMVRGL MLTLKYFFE TKVTINYPFE KGPLSPRFRG EHALRRYPTG EERCIACKLC EAICPAQAIT IEAEEREDGS RRTTRYDIDM T KCIYCGFC ...String:
MAAILARKSL LALRARQLAV SGQGLHSSQS YGLRLSAHSF STKLEDEQRE QLAKEISKDW SSVFERSINT LFLTEMVRGL MLTLKYFFE TKVTINYPFE KGPLSPRFRG EHALRRYPTG EERCIACKLC EAICPAQAIT IEAEEREDGS RRTTRYDIDM T KCIYCGFC QEACPVDAIV EGPNFEFATE THEELLYDKE KLLENGDRWE TEIAENLRSE SLYR

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Macromolecule #15: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial

MacromoleculeName: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
type: protein_or_peptide / ID: 15 / Number of copies: 1 / Enantiomer: LEVO / EC number: NADH dehydrogenase
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 53.817582 KDa
SequenceString: MRGILSLRSA LVQHRSEKLG LGLRQFSTQG ASTPTSPQPP PPPASPQPPP PPPPPEKTHF GGLKDEDRIF TNLYGLHDPF LKGAMKRGD WYRTKDLVIK GTDWIVNEMK KSGLRGRGGA GFPSGLKWSF MPKVSDGRPS YLVVNADESE PGTCKDREIM R HDPHKLLE ...String:
MRGILSLRSA LVQHRSEKLG LGLRQFSTQG ASTPTSPQPP PPPASPQPPP PPPPPEKTHF GGLKDEDRIF TNLYGLHDPF LKGAMKRGD WYRTKDLVIK GTDWIVNEMK KSGLRGRGGA GFPSGLKWSF MPKVSDGRPS YLVVNADESE PGTCKDREIM R HDPHKLLE GCLIAGVGMR ATAAYIYIRG EYVNERKNLE KARQEAYAAG LLGKNACGSG YDFDVHIHFG AGAYICGEET AL LESLEGK QGKPRLKPPF PANAGLYGCP TTVTNVETVA VSPTILRRGP EWFAGFGRKN NAGTKLFCVS GHVNKPCTVE EEM SIPLKE LIERHCGGVR GGWDNLLAVI PGGSSVPLLP KSICDDVLMD YDALKAVQSG LGTAAVIVMD KSTDVVDAIA RLSY FYKHE SCGQCTPCRE GTGWLWTIME RMKVGNAKLE EIDMLQELTK QIEGHTICAL GDAAAWPVQG LIRHFRPELE RRIRE NAER ELLQATG

+
Macromolecule #16: NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial

MacromoleculeName: NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial
type: protein_or_peptide / ID: 16 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 27.992949 KDa
SequenceString: MLARLAANRF NEIRHIFRQP SRAFSTALNY HLDSPDNNPN LPWEFTEPNK AKVTEILSHY PSNYKQSAVI PLLDLAQQQH GGWLPVSAM NAVANIIEVP PIRVYEVATF YSMFNRAKVG KYHLLVCGTT PCMIRGSRGI EEALLKHLGV KRNEVTPDGL F SVGEMECM ...String:
MLARLAANRF NEIRHIFRQP SRAFSTALNY HLDSPDNNPN LPWEFTEPNK AKVTEILSHY PSNYKQSAVI PLLDLAQQQH GGWLPVSAM NAVANIIEVP PIRVYEVATF YSMFNRAKVG KYHLLVCGTT PCMIRGSRGI EEALLKHLGV KRNEVTPDGL F SVGEMECM GCCVNAPMIT VADYSNGSEG YTYNYYEDVT PEKVVEIVEK LRKGEKPPHG TQNPLRIRSG PEGGNTTLLG EP KPPPCRD LDAC

+
Macromolecule #17: NU1M

MacromoleculeName: NU1M / type: protein_or_peptide / ID: 17 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 35.651367 KDa
SequenceString: MYIAVPAEIL GIILPLLLGV AFLVLAERKV MAFVQRRKGP DVVGSFGLLQ PLADGLKLIL KEPISPSSAN FSLFRMAPVA TFMLSLVAW AVVPFDYGMV LSDSNIGLLY LFAISSLGVY GIITAGWSSN SKYAFLGALR SAAQMVSYEV SIGLILITVL I CVGSCNLS ...String:
MYIAVPAEIL GIILPLLLGV AFLVLAERKV MAFVQRRKGP DVVGSFGLLQ PLADGLKLIL KEPISPSSAN FSLFRMAPVA TFMLSLVAW AVVPFDYGMV LSDSNIGLLY LFAISSLGVY GIITAGWSSN SKYAFLGALR SAAQMVSYEV SIGLILITVL I CVGSCNLS EIVMAQKQIW FGIPLFPVLV MFFISCLAET NRAPFDLPEA EAESVAGYNV EYSSMGSALF FLGEYANMIL MS GLCTSLS LGGWLPILDL PIFKRIPGSI WFSIKVILFL FLYIWVRAAF PRYRYDQLMG LGWKVFLPLS LAWVVAVSGV SVT FPWLP

+
Macromolecule #18: NU2M

MacromoleculeName: NU2M / type: protein_or_peptide / ID: 18 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 53.900664 KDa
SequenceString: MFNLFLAVYP EIFIINATFI LLIHGVVFST SKKYDYPPLV SNVGWLGLLS VLITLLLLAA GAPLLTIAHL FRNNLFRRDN FTYFCQILL LLSTAGTISM CFDFFEQERF DAFEFIVLIL LSTCSMLFMI SAYDSIAMYL AIELQSLCFY VMAASKRKSE F STEAGLKY ...String:
MFNLFLAVYP EIFIINATFI LLIHGVVFST SKKYDYPPLV SNVGWLGLLS VLITLLLLAA GAPLLTIAHL FRNNLFRRDN FTYFCQILL LLSTAGTISM CFDFFEQERF DAFEFIVLIL LSTCSMLFMI SAYDSIAMYL AIELQSLCFY VMAASKRKSE F STEAGLKY LILGAFSSGI LLFGCSMIYG STGATHFDQL AKILTGYEIT GARSSGIFMG ILFIAVGSLF KITAVPFHMW AP DIYEGSP TPVTAFLSIA PKISIFANIS RVSIYGSYGA TLQQIFCFCS IASMILGALA AMAQTKVKRL LAYSSIGHVG YIC TGFSCG TIEGIQSLLI GIFIYALMTI DAFAIVLALR QTRVKYIADL GALAKTNPIL AITFSITMFS YVGIPPLAGF CSKF YLFFA ALGCGAYFLA PVGVVTSVIG CFYYIRLAKR MFFDTPRTWI LYEPMDRDKS LLLAMTSSFI TLFFPYPSPL FSVTH QMAL SLYL

+
Macromolecule #19: NU3M

MacromoleculeName: NU3M / type: protein_or_peptide / ID: 19 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 13.507715 KDa
SequenceString:
MSEFAPICIY LVISLLVSLI LLGLPFLFAS NSSTYPEKLS AYECGFDPFG DARSRFDIRF YLVSILFIIF DPEVTFSFPW AVSLNKIDP FGSWSMMAFL LILTIGSLYE WKRGALDWE

+
Macromolecule #20: NU4L

MacromoleculeName: NU4L / type: protein_or_peptide / ID: 20 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 11.082356 KDa
SequenceString:
MDPIKYFTFS MIIFILGIRG ILLNRRNILI MLMSIELMLL AVNSNFLVFS VSLDDMMGQS FALLVLTVAA AESAIGLAIF VITFRVRGT IAVEFINSIQ G

+
Macromolecule #21: NU6M

MacromoleculeName: NU6M / type: protein_or_peptide / ID: 21 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 23.484178 KDa
SequenceString: MILSVLSSLA LVSGLMVVRA KNPVHSVLFF ILVFCDTSGL LLLLGLDFSA MIFLVVYIGA IAVLFLFVVM MFHIQIAEIH EEVLRYLPV SGIIGLILWW EMFFILDNET IPLLPTQINT TSLIYTVYAG KVRSWTNLET LGNLLYTYYF VWFLVPSLIL L VAMIGAIV ...String:
MILSVLSSLA LVSGLMVVRA KNPVHSVLFF ILVFCDTSGL LLLLGLDFSA MIFLVVYIGA IAVLFLFVVM MFHIQIAEIH EEVLRYLPV SGIIGLILWW EMFFILDNET IPLLPTQINT TSLIYTVYAG KVRSWTNLET LGNLLYTYYF VWFLVPSLIL L VAMIGAIV LTMHRTTKVK RQDVFRRNAI DFRRTIMRRT TDPLTID

+
Macromolecule #22: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1
type: protein_or_peptide / ID: 22 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 7.357572 KDa
SequenceString:
MNLRWMEAVL PLGIIAGMLC VMGNAQYYIH KAAHGRPKHI GNDLWDVAME RRDKKLHEQA ASSSN

+
Macromolecule #23: uncharacterized protein LOC106754061

MacromoleculeName: uncharacterized protein LOC106754061 / type: protein_or_peptide / ID: 23 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 6.695044 KDa
SequenceString:
MAVMEKLKMF VVQEPVVAAS CLIAGFGLFL PAVVRPILDS YQATKQPPQP ALSDVVAGMT GKK

+
Macromolecule #24: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B
type: protein_or_peptide / ID: 24 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 12.022893 KDa
SequenceString:
MASAVDASGN PIPSSSVLMA SSKHIGIRCH SENLDFLKCK KKDPNPEKCL DKGRDVTRCV LGLLKDLHQK CTKEMDDYVG CMYYHTNEF DLCRKEQQAF EKKCSLE

+
Macromolecule #25: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-A

MacromoleculeName: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-A
type: protein_or_peptide / ID: 25 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 16.1896 KDa
SequenceString:
MTEAYIRNKP GMVSVKDMPV LQDGPPPGGF APVRFARRIP NKGPSAVAIF LAAFGTFSWG MYQVGQGNKI RRALKEEKYA ARRSILPVL QAEEDERFVR EWHKYLAYEA EVMKDVPGWK VGESVYNSGR WVPPASGELR PDIW

+
Macromolecule #26: Unknown Peptide

MacromoleculeName: Unknown Peptide / type: protein_or_peptide / ID: 26 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 2.145636 KDa
SequenceString:
(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)

+
Macromolecule #27: Unknown Peptide

MacromoleculeName: Unknown Peptide / type: protein_or_peptide / ID: 27 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 3.677524 KDa
SequenceString: (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK) ...String:
(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)(UNK)

+
Macromolecule #28: NDUC2

MacromoleculeName: NDUC2 / type: protein_or_peptide / ID: 28 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 9.130512 KDa
SequenceString:
MVLSATTIGA LLGLGTQMYS NALRKLPYMR HPWEHVVGMG LGAVFVNQLL KWEAQVEQDL DKMLEKAKAA NERRYIDGDD D

+
Macromolecule #29: Protein At2g27730, mitochondrial

MacromoleculeName: Protein At2g27730, mitochondrial / type: protein_or_peptide / ID: 29 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 12.172666 KDa
SequenceString:
MAARVAARYG SRRLFSSGSG KILSEEEKAA ENAYFKKAEQ DKLEKLARKG PQPEASSGGS VIDAKPSGSG HTGASAERVS TDKHRNYAV VAGTITILGA LGWYLKGTAK KPEVQD

+
Macromolecule #30: serine/arginine-rich-splicing factor SR34 isoform X2

MacromoleculeName: serine/arginine-rich-splicing factor SR34 isoform X2 / type: protein_or_peptide / ID: 30 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 45.640945 KDa
SequenceString: MASGWGITGN KGRCYDFWMD FSECMSRCRE PKDCGLLRED YLECLHHSKE FQRRNRIYKE EQRKIRAAAK KAKDDGVVKE HHYLHGNTT DSNPHLSKVK KMSRRSSRTV YVGNLPGDIR EREVEDLFLK YGHITHIDLK VPPRPPGYAF VEFEDAQDAE D AIRGRDGY ...String:
MASGWGITGN KGRCYDFWMD FSECMSRCRE PKDCGLLRED YLECLHHSKE FQRRNRIYKE EQRKIRAAAK KAKDDGVVKE HHYLHGNTT DSNPHLSKVK KMSRRSSRTV YVGNLPGDIR EREVEDLFLK YGHITHIDLK VPPRPPGYAF VEFEDAQDAE D AIRGRDGY DFDGHRLRVE PAHGGRGHSS SRDRHSSHSN GRAGRGVSRR SEYRVLVTGL PSSASWQDLK DHMRKAGDVC FS QVFHDGR GTTGIVDYTN YDDMKYAIKK LDDSEFRNAF SKGYVRVREY DSRRDSSRSP SRGPSHSRGR SYSRSRSRSR SYS RDRSQS KSPKGKSSQR SPPAKSPSRS PAARSRSRSR SRSLSGSRSR SRSPLPPRNK SPKRGSASRS PSRSRSRSKS LSR

+
Macromolecule #31: NDUX1

MacromoleculeName: NDUX1 / type: protein_or_peptide / ID: 31 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 10.94954 KDa
SequenceString:
MNTDITASTK PEYPVVDRNP PFTKVVGNFS TLDYLRFVTI TGVSVTVGYL SGIKPGIRGP SMVTGGLIGV MGGFMYAYQN SAGRLMGFF PNDDEVARHN KK

+
Macromolecule #32: gamma carbonic anhydrase 1, mitochondrial

MacromoleculeName: gamma carbonic anhydrase 1, mitochondrial / type: protein_or_peptide / ID: 32 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 29.333197 KDa
SequenceString: MGTLGRAFYA VGFWIRETGQ AIDRLGSRLQ GNYLFQEQLS RHRPLMNLFD KYPSVHKDAF VAPSASLLGD VHVGPASSIW YGCVLRGDV NGIVIGSGTN IQDNSLVHVA KSNLTGKVLP TIIGDNVTVG HSAVLQGCTV EDEAFIGMGA TLLDGVYVEK H AMVAAGAL ...String:
MGTLGRAFYA VGFWIRETGQ AIDRLGSRLQ GNYLFQEQLS RHRPLMNLFD KYPSVHKDAF VAPSASLLGD VHVGPASSIW YGCVLRGDV NGIVIGSGTN IQDNSLVHVA KSNLTGKVLP TIIGDNVTVG HSAVLQGCTV EDEAFIGMGA TLLDGVYVEK H AMVAAGAL VRQNTRIPYG EVWGGNPAKF LRKLTEDEMA FFSQSALNYS NLAQAHAAEN AKELEETEFV KVLHKKFAPR GE EYDSILD GGQETPAKLN LQDNVLLDKA PKA

+
Macromolecule #33: gamma carbonic anhydrase 1, mitochondrial-like

MacromoleculeName: gamma carbonic anhydrase 1, mitochondrial-like / type: protein_or_peptide / ID: 33 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 29.780861 KDa
SequenceString: MGTLGRAIYS VGFWIRETGQ AIDRLGSRLQ GGYFFQEQLS RHRTLMNIFD KAPVVDKDVF VAPSASVIGD VQVGRGSSIW YGCVLRGDV NSIRVGSGTN IQDNSLVHVA KSNLSGKVLP TVIGDNVTVG HSAVLHGCTV EDEAFVGMGA VLLDGVVVEK N AMVAAGAL ...String:
MGTLGRAIYS VGFWIRETGQ AIDRLGSRLQ GGYFFQEQLS RHRTLMNIFD KAPVVDKDVF VAPSASVIGD VQVGRGSSIW YGCVLRGDV NSIRVGSGTN IQDNSLVHVA KSNLSGKVLP TVIGDNVTVG HSAVLHGCTV EDEAFVGMGA VLLDGVVVEK N AMVAAGAL VRQNTRIPSG EVWAGNPAKF LRKLSNEEIT FISQSAINYT NLAQVHAAEN SKSYDEIEFE KVLRKKYARK DE EYDSMLG VVREIPPELI LPDNVLPDKA EKALQK

+
Macromolecule #34: gamma carbonic anhydrase-like 2, mitochondrial

MacromoleculeName: gamma carbonic anhydrase-like 2, mitochondrial / type: protein_or_peptide / ID: 34 / Number of copies: 1 / Enantiomer: LEVO
Source (natural)Organism: Mung bean (mung bean)
Molecular weightTheoretical: 28.268359 KDa
SequenceString: MANLARFSKR ALRSAHSLVR HAQSQVQPQL FAEERAFSTE AAKSITPSPD RVKWDYRGQR KIIPLGQWLP KVAVDAYVAP NVVLAGQVT VWDGASVWPG CVLRGDLNKI SIGFCSNVQE RSVLHAAWTS PTGLPADTSI ERYVTIGAYS LLRSCTIEPE C IIGQHSIL ...String:
MANLARFSKR ALRSAHSLVR HAQSQVQPQL FAEERAFSTE AAKSITPSPD RVKWDYRGQR KIIPLGQWLP KVAVDAYVAP NVVLAGQVT VWDGASVWPG CVLRGDLNKI SIGFCSNVQE RSVLHAAWTS PTGLPADTSI ERYVTIGAYS LLRSCTIEPE C IIGQHSIL MEGSLVETQS ILEAGSVVPP GRRIPSGELW AGNPARFVRT LTHEEILEIP KLAVAINDLS RDHYSEFLPY ST VYLEVEK FKKSLGISV

+
Macromolecule #35: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

MacromoleculeName: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE / type: ligand / ID: 35 / Number of copies: 1 / Formula: NAP
Molecular weightTheoretical: 743.405 Da
Chemical component information

ChemComp-NAP:
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE / Nicotinamide adenine dinucleotide phosphate

+
Macromolecule #36: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE

MacromoleculeName: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE / type: ligand / ID: 36 / Number of copies: 6 / Formula: PC1
Molecular weightTheoretical: 790.145 Da
Chemical component information

ChemComp-PC1:
1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE / phospholipid*YM / Phosphatidylcholine

+
Macromolecule #37: IRON/SULFUR CLUSTER

MacromoleculeName: IRON/SULFUR CLUSTER / type: ligand / ID: 37 / Number of copies: 6 / Formula: SF4
Molecular weightTheoretical: 351.64 Da
Chemical component information

ChemComp-FS1:
IRON/SULFUR CLUSTER / Iron–sulfur cluster

+
Macromolecule #38: FE2/S2 (INORGANIC) CLUSTER

MacromoleculeName: FE2/S2 (INORGANIC) CLUSTER / type: ligand / ID: 38 / Number of copies: 2 / Formula: FES
Molecular weightTheoretical: 175.82 Da
Chemical component information

ChemComp-FES:
FE2/S2 (INORGANIC) CLUSTER / Iron–sulfur cluster

+
Macromolecule #39: ZINC ION

MacromoleculeName: ZINC ION / type: ligand / ID: 39 / Number of copies: 2 / Formula: ZN
Molecular weightTheoretical: 65.409 Da

+
Macromolecule #40: FLAVIN MONONUCLEOTIDE

MacromoleculeName: FLAVIN MONONUCLEOTIDE / type: ligand / ID: 40 / Number of copies: 1 / Formula: FMN
Molecular weightTheoretical: 456.344 Da
Chemical component information

ChemComp-FMN:
FLAVIN MONONUCLEOTIDE / Flavin mononucleotide

-
Experimental details

-
Structure determination

Methodcryo EM
Processingsingle particle reconstruction
Aggregation stateparticle

-
Sample preparation

Concentration6 mg/mL
BufferpH: 7.8
Component:
ConcentrationFormulaName
20.0 mMHEPESHEPES
150.0 mMNaClSodium chloridesodium chloride
0.1 %digitonindigitonin
1.0 mMedtaEthylenediaminetetraacetic acidEDTAEthylenediaminetetraacetic acid
GridModel: Quantifoil R1.2/1.3 / Material: COPPER / Mesh: 300 / Support film - Material: CARBON / Support film - topology: HOLEY / Pretreatment - Type: GLOW DISCHARGE / Details: 30 mA
VitrificationCryogen name: ETHANE / Instrument: FEI VITROBOT MARK III
Details: Blotted for 9 seconds at 100% humidity, 15 degrees C..
DetailsExtracted from V. radiata mitochondrial membranes with digitonin, exchanged into amphipole A8-35, purified on sucrose gradient.

-
Electron microscopy

MicroscopeTFS KRIOS
Electron beamAcceleration voltage: 300 kV / Electron source: FIELD EMISSION GUN
Electron opticsIllumination mode: OTHER / Imaging mode: BRIGHT FIELDBright-field microscopy
Image recordingFilm or detector model: GATAN K3 (6k x 4k) / Number grids imaged: 1 / Number real images: 9816 / Average exposure time: 3.0 sec. / Average electron dose: 86.4 e/Å2
Experimental equipment
Model: Titan Krios / Image courtesy: FEI Company

-
Image processing

Particle selectionNumber selected: 190951
CTF correctionSoftware - Name: CTFFIND
Startup modelType of model: INSILICO MODEL / In silico model: Ab initio
Initial angle assignmentType: MAXIMUM LIKELIHOOD / Software - Name: RELION
Final 3D classificationNumber classes: 3 / Software - Name: RELION
Final angle assignmentType: MAXIMUM LIKELIHOOD / Software - Name: RELION
Final reconstructionNumber classes used: 1 / Applied symmetry - Point group: C1 (asymmetric) / Algorithm: FOURIER SPACE / Resolution.type: BY AUTHOR / Resolution: 3.9 Å / Resolution method: FSC 0.143 CUT-OFF / Software - Name: RELION / Number images used: 34407

-
Atomic model buiding 1

RefinementSpace: REAL / Protocol: OTHER
Output model

PDB-6x89:
Vigna radiata mitochondrial complex I*

+
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