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- SASDCR7: TET12(1.10)SN-c6 -

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Entry
Database: SASBDB / ID: SASDCR7
SampleTET12(1.10)SN-c6
TET12(1.10)SN-c6 (protein), synthetic construct
SourceSynthetic construct
Citation

, 2017 Oct 16
Design of coiled-coil protein-origami cages that self-assemble in vitro and in vivo.
Ljubetič A / Lapenta F / Gradišar H / Drobnak I / Aupič J / Strmšek Ž / Lainšček D / Hafner-Bratkovič I / Majerle A / Krivec N / Benčina M / Pisanski T / Veličković TĆ / Round A / Carazo JM / Melero R

Contact authorJana Aupic (National Institute of Chemistry, Slovenia)

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Models

Model #1576
Type: atomic / Software: (9.16) / Radius of dummy atoms: 1.90 A
Search similar-shape structures of this assembly by Omokage search (details)

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Sample

SampleName: TET12(1.10)SN-c6 / Specimen concentration: 0.90-3.60
BufferName: 20 mM Tris 150 mM NaCl 10% glycerol / pH: 7.5
Entity #802Type: protein / Description: TET12(1.10)SN-c6 / Formula weight: 54.345 / Number of molecules: 1 / Source: synthetic construct / References: UniProt:
Sequence:
MLEEELKQLE EELQAIEEQL AQLQWKAQAR KEKLAQLKEK LGKGDGSPED EIQQLEEEIS QLEQKNSELK EKNQELKYGK GDGDIEQELE RAKESIRRLE QEVNQERSRM QYLQTLLEKG KGDGQLEDKV EELLSKNYHL ENEVERLKKL VGGKGDGLEE ELKQLEEELQ AIEEQLAQLQ WKAQARKEKL AQLKEKLGKG DGSPEDEIQQ LEEKNSQLKQ EISQLEEKNQ ELKYGDGKGQ LEDKVEELLS KNYHLENEVE RLKKLVGGDG KGSPEDKISQ LKEKIQQLKQ ENQQLEEENS QLEYGDGKGS PEDENSQLEE KISQLKQKNS ELKEEIQQLE YGDGKGSPED KISELKEENQ QLEQKIQQLK EENSQLEYGK GDGDIEQELE RAKESIRRLE QEVNQERSRM QYLQTLLEKG KGDGSPEDKN SELKEEIQQL EEENQQLEEK ISELKYLEHH HHHHHH

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Experimental information

BeamInstrument name: PETRA III P12 / Instrument city: Hamburg / Instrument country: Germany / Shape: Point / Type of source: X-ray synchrotron / Radiation wavelength: 0.124 / Dist spec to detc: 2
ScanTitle: TET12(1.10)SN-c6 / Measurement date: Jun 10, 2016 / Storage temperature: 1 / Cell temperature: 2 / Exposure time: 0.045 / Number of frames: 20 / Unit: 1/nm / Qmin: 0.2035 / Qmax: 6.7156
Distance distribution function P(R)Software p of R: GNOM 5.0 / Number of points: 356 / Qmin: 0.208986 / Qmax: 2.14352 / P of R point min: 1 / P of R point max: 356 / Rmin: 0 / Rmax: 11.5
ResultSASBDB code: SASDCR7 / Experimental MW: 42 / MW standard: 42 / MW standard error: 4 / MW Porod: 84 / I0 from PR: 5596 / I0 from PR error: 21 / I0 from Guinier: 5617 / I0 from Guinier error: 72 / Rg from PR: 3.57 / Rg from PR error: 0.01 / Rg from Guinier: 3.56 / Rg from Guinier error: 0.05 / D max: 11.5 / Porod volume: 145 / Guinier point min: 14 / Guinier point max: 30 / Type of curve: single_conc / Dmax error: 2

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