- PDB-2blf: Sulfite dehydrogenase from Starkeya Novella -
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IDまたはキーワード:
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基本情報
登録情報
データベース: PDB / ID: 2blf
タイトル
Sulfite dehydrogenase from Starkeya Novella
要素
(Sulfite:cytochrome c oxidoreductase subunit ...) x 2
キーワード
OXIDOREDUCTASE / SULFITE OXIDASE / MOLYBDOPTERIN / C-TYPE CYTOCHROME / HEME / ELECTRON TRANSPORT
機能・相同性
機能・相同性情報
sulfite oxidase activity / sulfur compound metabolic process / molybdenum ion binding / molybdopterin cofactor binding / electron transfer activity / heme binding / metal ion binding 類似検索 - 分子機能
HEME C / (MOLYBDOPTERIN-S,S)-OXO-MOLYBDENUM / Sulfite:cytochrome c oxidoreductase subunit B / Sulfite:cytochrome c oxidoreductase subunit A 類似検索 - 構成要素
ジャーナル: J.Biol.Chem. / 年: 2005 タイトル: Molecular Basis of Intramolecular Electron Transfer in Sulfite-Oxidizing Enzymes is Revealed by High Resolution Structure of a Heterodimeric Complex of the Catalytic Molybdopterin ...タイトル: Molecular Basis of Intramolecular Electron Transfer in Sulfite-Oxidizing Enzymes is Revealed by High Resolution Structure of a Heterodimeric Complex of the Catalytic Molybdopterin Subunit and a C-Type Cytochrome Subunit. 著者: Kappler, U. / Bailey, S.
#1: ジャーナル: Acta Crystallogr. / 年: 2004 タイトル: Crystallisation and Preliminary X-Ray Analysis of Sulfite Dehydrogenase from Starkeya Novella. 著者: Kappler, U. / Bailey, S.
履歴
登録
2005年3月4日
登録サイト: PDBE / 処理サイト: PDBE
改定 1.0
2005年4月28日
Provider: repository / タイプ: Initial release
改定 1.1
2014年10月22日
Group: Database references / Derived calculations ...Database references / Derived calculations / Non-polymer description / Other / Structure summary / Version format compliance
SHEET THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN ORDER TO REPRESENT THIS FEATURE IN ... SHEET THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, TWO SHEETS ARE DEFINED.
THE TRANSLATED SEQUENCES FOR CHAINS A AND B INCLUDE SIGNAL PEPTIDES WHICH ARE NOT PART OF THE ...THE TRANSLATED SEQUENCES FOR CHAINS A AND B INCLUDE SIGNAL PEPTIDES WHICH ARE NOT PART OF THE ACTIVE, PROCESSED PROTEIN. THE SEQUENCES OF THE SIGNAL PEPTIDES ARE: CHAIN A: MLNNRRQILKSAGAAALGLGAGTLGWPGRHAFA CHAIN B: MKRHNARTLAFSVVLGLSAAFAGSGLA
解像度: 1.8→20 Å / Cor.coef. Fo:Fc: 0.966 / Cor.coef. Fo:Fc free: 0.949 / SU B: 1.67 / SU ML: 0.054 / 交差検証法: THROUGHOUT / ESU R: 0.1 / ESU R Free: 0.098 / 立体化学のターゲット値: MAXIMUM LIKELIHOOD / 詳細: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
Rfactor
反射数
%反射
Selection details
Rfree
0.169
2295
5.1 %
RANDOM
Rwork
0.136
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obs
0.138
43048
95.3 %
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溶媒の処理
イオンプローブ半径: 0.8 Å / 減衰半径: 0.8 Å / VDWプローブ半径: 1.2 Å / 溶媒モデル: BABINET MODEL WITH MASK