[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 320 items for (author: zhang & sj)

EMDB-64131:
Structure of SARS-CoV-2 spike-CD147 complex at 3.75 Angstroms resolution
Method: single particle / : Zhang SJ, Yang ZW, Lin P, Bian HJ, Zhu P, Zhang L, Chen ZN

EMDB-55409:
HIV-1 integrase filament at the luminal side of capsid lattice by subtomogram averaging.
Method: subtomogram averaging / : Cherepanov P, Chenavier F, Hope J, Nans A, Zhang P

EMDB-62609:
Cryo-EM structure of Leptospirillum ferriphilum helicase Dda
Method: single particle / : Liu RH, Liu JD, Zhang K, He SJ, Feng QS, Dai J, Guo XR, Fu Y, Li Y

EMDB-63017:
Coordinates of Cryo-EM structure of the Arabidopsis thaliana C4S4M4-type PSII supercomplex
Method: single particle / : Chen SJB, Wu C, Wu JH, Sui SF, Zhang LX

EMDB-63018:
Coordinates of Cryo-EM structure of the Arabidopsis thaliana C2S2M2-type PSII supercomplex
Method: single particle / : Chen SJB, Wu C, Wu JH, Sui SF, Zhang LX

EMDB-55015:
CryoET STA structure of Class2 from Mxb1-35/CA-NC complex
Method: subtomogram averaging / : Zhu Y, Rey SJ, Shen J, Perilla RJ, Zhang P

EMDB-55019:
CryoEM Structure of HIV-1 CA hexamer from Mxb1-35/CA-NC tube complex
Method: single particle / : Zhu Y, Shen J, Zhang P, Perilla RJ

EMDB-60835:
Structure of rat TRPV1 in complex with PSFL426-S5
Method: single particle / : Chen X, Yu Y

EMDB-54042:
STA structure of CA hexamer from HIV-1 CA-NC tube
Method: subtomogram averaging / : Zhu Y, Shen J, Zhang P

EMDB-54043:
STA structure of CA hexamer from HIV-1 CA-NC tube incubated with MxB N-terminus
Method: subtomogram averaging / : Zhu Y, Shen J, Zhang P

EMDB-54044:
STA structure of CA-MxB complex from HIV-1 CA-NC tube incubated with MxB N-terminus
Method: subtomogram averaging / : Zhu Y, Shen J, Zhang P

EMDB-61827:
Structure of Arabidopsis thaliana ABCB1 in the inward-facing conformation
Method: single particle / : Chen Q, Su N, Guo J

EMDB-61828:
Structure of Arabidopsis thaliana ABCB1 with AMP-PNP bound in the inward-facing conformation
Method: single particle / : Chen Q, Su N, Guo J

EMDB-61829:
Structure of Arabidopsis thaliana ABCB1 with brassinolide bound in the inward-facing conformation
Method: single particle / : Chen Q, Su N, Guo J

EMDB-61830:
Structure of Arabidopsis thaliana ABCB1 with brassinolide and AMP-PNP bound in the inward-facing conformation
Method: single particle / : Chen Q, Su N, Guo J

EMDB-61831:
Structure of Arabidopsis thaliana ABCB1 in the inward-facing conformation under IAA condition
Method: single particle / : Chen Q, Su N, Guo J

EMDB-61832:
Structure of Arabidopsis thaliana ABCB1 with AMP-PNP bound in the inward-facing conformation under IAA condition
Method: single particle / : Chen Q, Su N, Guo J

EMDB-61833:
Structure of Arabidopsis thaliana ABCB1 with AMP-PNP bound in the outward-facing conformation
Method: single particle / : Chen Q, Su N, Guo J

EMDB-44113:
Haspin bound to nucleosome in position 1
Method: single particle / : Hicks CW, Wolberger C

EMDB-38847:
GluN1b-GluN2D NMDA receptor in complex with competitive antagonist R-CPP and allosteric inhibitor YY-23
Method: single particle / : Zhang JL, Zhu SJ, Guo F

EMDB-34608:
NARROW LEAF 1-open from Japonica
Method: single particle / : Zhang SJ, He YJ, Wang N, Zhang WJ, Liu CM

EMDB-34609:
NARROW LEAF 1 from Indica
Method: single particle / : Zhang SJ, He YJ, Wang N, Zhang WJ, Liu CM

EMDB-41409:
Cryo-EM structure of PCSK9 mimic HIT01-K21Q-R218E with AMG145 Fab
Method: single particle / : Cheng J, Kwong PD

EMDB-34607:
NARROW LEAF 1-close from Japonica
Method: single particle / : Zhang SJ, He YJ, Wang N, Zhang WJ, Liu CM

EMDB-37736:
Cryo-EM structure of CUL2-RBX1-ELOB-ELOC-FEM1B bound with the C-degron of CCDC89 (conformation 1)
Method: single particle / : Chen X, Zhang K, Xu C

EMDB-37737:
Cryo-EM structure of CUL2-RBX1-ELOB-ELOC-FEM1B bound with the C-degron of CCDC89 (conformation 2)
Method: single particle / : Chen X, Zhang K, Xu C

EMDB-37739:
cryo-EM structure of neddylated CUL2-RBX1-ELOB-ELOC-FEM1B bound with the C-degron of CDK5R1
Method: single particle / : Chen X, Zhang K, Xu C

EMDB-37740:
Local refinement of FEM1B bound with the C-degron of CCC89
Method: single particle / : Chen X, Zhang K, Xu C

EMDB-37742:
Cryo-EM structure of CUL2-RBX1-ELOB-ELOC-FEM1B bound with the C-degron of CUX1 (conformation 1)
Method: single particle / : Chen X, Zhang K, Xu C

EMDB-37743:
cryo-EM structure of CUL2-RBX1-ELOB-ELOC-FEM1B bound with the C-degron of CUX1 (conformation 2)
Method: single particle / : Chen X, Zhang K, Xu C

EMDB-37744:
cryo-EM structure of neddylated CUL2-RBX1-ELOB-ELOC-FEM1B bound with the C-degron of CCDC89 (conformation 1)
Method: single particle / : Chen X, Zhang K, Xu C

EMDB-37745:
cryo-EM structure of neddylated CUL2-RBX1-ELOB-ELOC-FEM1B bound with the C-degron of CCDC89 (conformation 2)
Method: single particle / : Chen X, Zhang K, Xu C

EMDB-37746:
Local refinement of FEM1B bound with the C-degron of CUX1
Method: single particle / : Chen X, Zhang K, Xu C

EMDB-35678:
Apo state of Arabidopsis AZG1 at pH 7.4
Method: single particle / : Xu L, Guo J

EMDB-35679:
Endogenous substrate adenine bound state of Arabidopsis AZG1 at pH 5.5
Method: single particle / : Xu L, Guo J

EMDB-35680:
6-BAP bound state of Arabidopsis AZG1
Method: single particle / : Xu L, Guo J

EMDB-35681:
trans-Zeatin bound state of Arabidopsis AZG1 at pH7.4
Method: single particle / : Xu L, Guo J

EMDB-35682:
kinetin bound state of Arabidopsis AZG1
Method: single particle / : Xu L, Guo J

EMDB-37658:
trans-Zeatin bound state of Arabidopsis AZG1 at pH5.5
Method: single particle / : Xu L, Guo J

EMDB-37681:
Apo state of Arabidopsis AZG1 T440Y
Method: single particle / : Xu L, Guo J

EMDB-41048:
Lassa GPC Trimer in complex with Fab 8.11G and nanobody D5
Method: single particle / : Gorman J, Kwong PD

EMDB-42124:
Cryo-EM structure of human STEAP1 in complex with AMG 509 Fab
Method: single particle / : Li F, Bailis JM

PDB-8ucd:
Cryo-EM structure of human STEAP1 in complex with AMG 509 Fab
Method: single particle / : Li F, Bailis JM, Zhang H

EMDB-36020:
Cryo-EM structure of the Arabidopsis thaliana photosystem I(PSI-LHCII-ST2)
Method: single particle / : Chen SJB, Wu JH

EMDB-36021:
Cryo-EM structure of the Arabidopsis thaliana photosystem I(PSI-LHCII-ST2)
Method: single particle / : Chen SJB, Wu JH, Sui SF, Zhang LX

EMDB-36022:
LHCI of PSI-LHCII from Arabidopsis thaliana(state2)
Method: single particle / : Chen SJB, Wu JH

EMDB-36023:
LHCII of PSI-LHCII from Arabidopsis thaliana(state2)
Method: single particle / : Chen SJB, Wu JH, Sui SF

EMDB-36026:
Cryo-EM structure of the Arabidopsis thaliana photosystem I in state 2(PSI-ST2)
Method: single particle / : Chen SJB, Wu JH

EMDB-36032:
LHCI of PSI from Arabidopsis thaliana in state 2 (PSI-ST2)
Method: single particle / : Chen SJB, Sui SF, Wu JH

EMDB-36033:
Cryo-EM structure of the Arabidopsis thaliana PSI in state 1 (PSI-ST1)
Method: single particle / : Chen SJB, Wu JH, Sui SF

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more