[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 55 items for (author: yeung & ho)

EMDB-73228:
Local refinement of Fab-14/SARS-CoV-2 D614G spike complex, Mode I
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73231:
Cryo-EM map of D614G spike, 1-up-RBD
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73244:
SARS-CoV-2 D614G spike, 3-RBD-downn
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73245:
Local refinement of Fab-14/SARS-CoV-2 D614G spike complex, Mode I, Subgroup I conformation
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73247:
Fab-14/SARS-CoV-2 D614G spike complex, Mode V conformation
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73260:
Fab-14/SARS-CoV-2 D614G spike complex, Mode I conformation
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73263:
Fab-14/SARS-CoV-2 D614G spike complex, Mode II, subgroup I conformation
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73265:
Fab-14/SARS-CoV-2 D614G spike complex, Mode II, subgroup II conformation
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73267:
Fab-14/SARS-CoV-2 D614G spike complex, Mode II, subgroup III conformation
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73270:
Fab-14/SARS-CoV-2 Omicron BA.1 spike complex
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73271:
SARS-CoV-2 Omicron BA.1 spike, 3-RBD-down
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73273:
SARS-CoV-2 Omicron BA.1 spike, 1-RBD-up
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73290:
Fab-14/SARS-CoV-2 D614G spike complex, Mode III conformation
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73291:
Unbound SARS-CoV-2 D614G spike
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73292:
Fab-14/SARS-CoV-2 D614G spike complex, Mode IV, subgroup II conformation
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-73306:
Fab-14/SARS-CoV-2 D614G spike complex, Mode IV, subgroup II conformation
Method: single particle / : Wang Y, Hu Y, Leiman P, Xie X

EMDB-49874:
CryoET tomogram of hESC-derived retinal ganglion cell treated with calcification media
Method: electron tomography / : Hou C, Wu GH, Patel HR, Liao YJ, Chiu W

EMDB-49875:
CryoET tomogram of hESC-derived retinal ganglion cell treated with potassium phosphate
Method: electron tomography / : Hou C, Wu GH, Patel HR, Liao YJ, Chiu W

EMDB-42917:
De novo designed KWOCA 18 nanoparticle - Assembly in D2 symmetry
Method: single particle / : Antanasijevic A, Ward AB

EMDB-42919:
De novo designed KWOCA 18 nanoparticle - Assembly in D5 symmetry
Method: single particle / : Antanasijevic A, Ward AB

EMDB-42921:
De novo designed KWOCA 70 nanoparticle - Assembly in D2 symmetry
Method: single particle / : Antanasijevic A, Ward AB

EMDB-42924:
De novo designed KWOCA 70 nanoparticle - Assembly in D3 symmetry
Method: single particle / : Antanasijevic A, Ward AB

EMDB-41849:
Structure of 310-18A5 Fab in complex with A/Solomon Islands/3/2006(H1N1) influenza virus hemagglutinin
Method: single particle / : Lei R, Wu NC

EMDB-33887:
Rubisco from Phaeodactylum tricornutum bound to PYCO1(452-592)
Method: single particle / : Oh ZG, Ang WSL, Bhushan S, Mueller-Cajar O

EMDB-35158:
Rubisco from Phaeodactylum tricornutum
Method: single particle / : Oh ZG, Ang WSL, Bhushan S, Mueller-Cajar O

EMDB-35159:
PYCO1(452-592) from Phaeodactylum tricornutum
Method: single particle / : Oh ZG, Ang WSL, Bhushan S, Mueller-Cajar O

EMDB-35166:
Rubisco from Phaeodactylum tricornutum bound to PYCO1(452-592)
Method: single particle / : Oh ZG, Ang WSL, Bhushan S, Mueller-Cajar O

PDB-7yk5:
Rubisco from Phaeodactylum tricornutum bound to PYCO1(452-592)
Method: single particle / : Oh ZG, Ang WSL, Bhushan S, Mueller-Cajar O

EMDB-29207:
CryoET tomogram of mitochondria in BACHD mouse model neuron
Method: electron tomography / : Wu GH, Galaz-Montoya JG, Gu Y, Mitchell PG, Wu C, Chiu W

EMDB-29208:
CryoET tomogram of BACHD mouse model neuron showing sheet aggregates
Method: electron tomography / : Wu GH, Galaz-Montoya JG, Gu Y, Mitchell PG, Wu C, Chiu W

EMDB-29210:
CryoET tomogram of purified mitochondria from HD patient iPSC-derived neuron (Q109)
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-29211:
CryoET tomogram of HD patient iPSC-derived neuron (Q66) with PIAS1 hetKO treatment
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-28668:
CryoET tomogram of iPSC-derived control non-HD neuron (Q18)
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-28944:
CryoET tomogram of iPSC-derived control non-HD neuron (Q20)
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-28946:
CryoET tomogram of HD patient iPSC-derived neuron (Q53)
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-29074:
CryoET tomogram of HD patient iPSC-derived neuron (Q66)
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-29075:
CryoET tomogram of HD patient iPSC-derived neuron (Q77)
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-29076:
CryoET tomogram of HD patient iPSC-derived neuron (Q109)
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-29079:
CryoET tomogram of HD patient iPSC-derived neuron (Q66) showing sheet aggregate
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-29080:
CryoET tomogram of HD patient iPSC-derived neuron (Q66) with PIAS1 hetKO treatment
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-29081:
CryoET tomogram of HD patient iPSC-derived neuron (Q66) with GRSF1 KD treatment
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-29083:
CryoET tomogram of mitochondria in WT mouse neuron
Method: electron tomography / : Wu GH, Galaz-Montoya JG, Gu Y, Mitchell PG, Wu C, Chiu W

EMDB-29084:
CryoET tomogram of mitochondria in BACHD-dN17 mouse model neuron
Method: electron tomography / : Wu GH, Galaz-Montoya JG, Gu Y, Mitchell PG, Wu C, Chiu W

EMDB-32497:
SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (focused refinement on Fab-RBD)
Method: single particle / : Zeng JW

EMDB-32498:
SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (3U)
Method: single particle / : Zeng JW, Ge JW

EMDB-32499:
SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (2u1d)
Method: single particle / : Zeng JW, Wang XW

PDB-7wh8:
SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (focused refinement on Fab-RBD)
Method: single particle / : Zeng JW

PDB-7whb:
SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (3U)
Method: single particle / : Zeng JW, Ge JW, Wang XQ

PDB-7whd:
SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (2u1d)
Method: single particle / : Zeng JW, Wang XW, Ge JW, Wang ZY

EMDB-2589:
Inter-ring rotations of AAA ATPase p97
Method: single particle / : Yeung HO, Forster A, Bebeacua C, Niwa H, Ewens C, McKeown C, Zhang X, Freemont PS

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more