[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 10,531 items for (author: ye & y)

EMDB-72136:
NediV IRES (A site) in complex with Rabbit 80S ribosome
Method: single particle / : De S, Altomare CG, Abaeva IS, Dadhwal P, Garg P, Acosta-Reyes F, Brown ZP, Pestova TV, Hellen CUT, Frank J

EMDB-72137:
NediV IRES (P site) in complex with Rabbit 80S ribosome
Method: single particle / : De S, Altomare CG, Abaeva IS, Dadhwal P, Garg P, Acosta-Reyes F, Brown ZP, Pestova TV, Hellen CUT, Frank J

EMDB-72168:
Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF
Method: single particle / : De S, Altomare CG, Abaeva IS, Dadhwal P, Garg P, Acosta-Reyes F, Brown ZP, Pestova TV, Hellen CUT, Frank J

EMDB-72171:
Rabbit ribosomal 80S elongation complex with eEF1A, A*/T Ala-tRNA, P site Ala-tRNA, E site Ala-tRNA on NediV ORF
Method: single particle / : De S, Altomare CG, Abaeva IS, Dadhwal P, Garg P, Acosta-Reyes F, Brown ZP, Pestova TV, Hellen CUT, Frank J

EMDB-72175:
NediV IRES in complex with Rabbit 80S ribosome with eEF2 and P site Ala-tRNA
Method: single particle / : De S, Altomare CG, Abaeva IS, Dadhwal P, Garg P, Acosta-Reyes F, Brown ZP, Pestova TV, Hellen CUT, Frank J

PDB-9q1q:
NediV IRES (A site) in complex with Rabbit 80S ribosome
Method: single particle / : De S, Altomare CG, Abaeva IS, Dadhwal P, Garg P, Acosta-Reyes F, Brown ZP, Pestova TV, Hellen CUT, Frank J

PDB-9q1s:
NediV IRES (P site) in complex with Rabbit 80S ribosome
Method: single particle / : De S, Altomare CG, Abaeva IS, Dadhwal P, Garg P, Acosta-Reyes F, Brown ZP, Pestova TV, Hellen CUT, Frank J

PDB-9q2m:
Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF
Method: single particle / : De S, Altomare CG, Abaeva IS, Dadhwal P, Garg P, Acosta-Reyes F, Brown ZP, Pestova TV, Hellen CUT, Frank J

PDB-9q2p:
Rabbit ribosomal 80S elongation complex with eEF1A, A*/T Ala-tRNA, P site Ala-tRNA, E site Ala-tRNA on NediV ORF
Method: single particle / : De S, Altomare CG, Abaeva IS, Dadhwal P, Garg P, Acosta-Reyes F, Brown ZP, Pestova TV, Hellen CUT, Frank J

PDB-9q2t:
NediV IRES in complex with Rabbit 80S ribosome with eEF2 and P site Ala-tRNA
Method: single particle / : De S, Altomare CG, Abaeva IS, Dadhwal P, Garg P, Acosta-Reyes F, Brown ZP, Pestova TV, Hellen CUT, Frank J

EMDB-75431:
The cryoEM structure of T10 type2 nanofiber
Method: helical / : Zhang H, Yang Y

EMDB-75434:
The CryoEM structure of T12 type1 nanofiber
Method: helical / : Zhang H, Yang Y

EMDB-75435:
The CryoEM structure of T12 type2 nanofiber
Method: helical / : Zhang H, Yang Y

PDB-10sd:
The cryoEM structure of T10 type2 nanofiber
Method: helical / : Zhang H, Yang Y

PDB-10sg:
The CryoEM structure of T12 type1 nanofiber
Method: helical / : Zhang H, Yang Y

PDB-10sh:
The CryoEM structure of T12 type2 nanofiber
Method: helical / : Zhang H, Yang Y

EMDB-72170:
NediV IRES in complex with Rabbit 80S ribosome with A site Ala-tRNA
Method: single particle / : De S, Altomare CG, Abaeva IS, Dadhwal P, Garg P, Acosta-Reyes F, Brown ZP, Pestova TV, Hellen CUT, Frank J

PDB-9q2o:
NediV IRES in complex with Rabbit 80S ribosome with A site Ala-tRNA
Method: single particle / : De S, Altomare CG, Abaeva IS, Dadhwal P, Garg P, Acosta-Reyes F, Brown ZP, Pestova TV, Hellen CUT, Frank J

EMDB-72011:
Engaged-state naloxone-mu opioid receptor-Gi GDPbS complex (rebound) - Consensus map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-72016:
Latent-state naloxone-mu opioid receptor-Gi GDP complex (constant GDP) - Consensus map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-72018:
Engaged-state naloxone-mu opioid receptor-Gi GDP complex (constant GDP) - Consensus map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-72020:
Open-AHD naloxone-mu opioid receptor-Gi GDP complex (constant GDP) - Consensus map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-72028:
Open-AHD loperamide-mu opioid receptor-Gi GDP complex (constant GDP) - Locally refined Gi map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-66444:
Pseudomonas aeruginosa (PAO1) Outer membrane PilQ (Secretin) in C1 symmetry
Method: single particle / : Kwon O, Lee Y, Ryu B, Yoo Y, Chung J, Cho H

EMDB-66445:
Pseudomonas aeruginosa (PAO1) Outer membrane PilQ (Secretin) with SlkB in C1 symmetry
Method: single particle / : Kwon O, Lee Y, Ryu B, Yoo Y, Chung J, Cho H

EMDB-66446:
Pseudomonas aeruginosa (PAO1) Outer membrane PilQ (Secretin) with SlkA in C1 symmetry
Method: single particle / : Kwon O, Lee Y, Ryu B, Yoo Y, Chung J, Cho H

EMDB-66447:
Pseudomonas aeruginosa (PAO1) Outer membrane PilQ (Secretin) in C14 symmetry
Method: single particle / : Kwon O, Lee Y, Ryu B, Yoo Y, Chung J, Cho H

EMDB-66448:
Pseudomonas aeruginosa (PAO1) Outer membrane PilQ (Secretin) with SlkB in C14 symmetry
Method: single particle / : Kwon O, Lee Y, Ryu B, Yoo Y, Chung J, Cho H

EMDB-66449:
Pseudomonas aeruginosa (PAO1) Outer membrane PilQ (Secretin) with SlkA in C14 symmetry
Method: single particle / : Kwon O, Lee Y, Ryu B, Yoo Y, Chung J, Cho H

PDB-9x0w:
Pseudomonas aeruginosa (PAO1) Outer membrane PilQ (Secretin) in C14 symmetry
Method: single particle / : Kwon O, Lee Y, Ryu B, Yoo Y, Chung J, Cho H

PDB-9x0x:
Pseudomonas aeruginosa (PAO1) Outer membrane PilQ (Secretin) with SlkB in C14 symmetry
Method: single particle / : Kwon O, Lee Y, Ryu B, Yoo Y, Chung J, Cho H

PDB-9x0y:
Pseudomonas aeruginosa (PAO1) Outer membrane PilQ (Secretin) with SlkA in C14 symmetry
Method: single particle / : Kwon O, Lee Y, Ryu B, Yoo Y, Chung J, Cho H

EMDB-66192:
Cyro-EM structure of the ACT-451840-bound PfMDR1
Method: single particle / : Zhao Z, Li J, Wang X, Liu X, Wang N, Xu H, Quan C, Kato N, Deng D, Jing X

PDB-9ws4:
Cyro-EM structure of the ACT-451840-bound PfMDR1
Method: single particle / : Zhao Z, Li J, Wang X, Liu X, Wang N, Xu H, Quan C, Wang X, Kato N, Deng D, Jing X

EMDB-56127:
Neuraminidase NA isolated from the H1N1 strain A/Victoria/2570/2019 propagated in eggs in complex with zanamivir
Method: single particle / : Borowska A, Kang H, Slotboom DJ, Daniels R

PDB-9tq8:
Neuraminidase NA isolated from the H1N1 strain A/Victoria/2570/2019 propagated in eggs in complex with zanamivir
Method: single particle / : Borowska A, Kang H, Slotboom DJ, Daniels R

EMDB-73803:
Cryo-EM structure of human Wntless in complex with Wnt5a at 1:1 stoichiometry
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Wang Z, Salic A, Jiang J, Huang P

EMDB-73810:
Cryo-EM structure of human Wntless in its apo state
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Yadav GP, Wang Z, Salic A, Jiang J, Huang P

EMDB-73835:
Cryo-EM structure of human Wntless-Wnt5a 2:2 complex - Focused map A
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Yadav GP, Wang Z, Salic A, Jiang J, Huang P

EMDB-73836:
Cryo-EM structure of human Wntless-Wnt5a 2:2 complex - Focused map B
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Yadav GP, Wang Z, Salic A, Jiang J, Huang P

EMDB-73837:
Cryo-EM structure of human Wntless-Wnt5a 2:2 complex - Consensus map
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Yadav GP, Wang Z, Salic A, Jiang J, Huang P

EMDB-73838:
Cryo-EM structure of human Wntless-Wnt5a 2:2 complex - Composite map
Method: single particle / : Ge Y, de Almeida Magalhaes T, Wu H, Yadav GP, Wang Z, Salic A, Jiang J, Huang P

EMDB-54642:
Cryo-EM (200kV) structure of pyruvate decarboxylase from Neoasaia chiangmaiensis
Method: single particle / : van Rooyen JM, Barker I, Fruncillo S, Pandya A, Ozkaya D, Alcasabas A

PDB-9s7j:
Cryo-EM (200kV) structure of pyruvate decarboxylase from Neoasaia chiangmaiensis
Method: single particle / : van Rooyen JM, Barker I, Fruncillo S, Pandya A, Ozkaya D, Alcasabas A

EMDB-74190:
The complex of HSV-1 proteins UL9 and ICP8 with forked DNA
Method: single particle / : Baranovskiy AG, Morstadt LM, Romero EE, Babayeva ND, Tahirov TH

PDB-9zgf:
The complex of HSV-1 proteins UL9 and ICP8 with forked DNA
Method: single particle / : Baranovskiy AG, Morstadt LM, Romero EE, Babayeva ND, Tahirov TH

EMDB-56126:
Neuraminidase NA isolated from the H1N1 strain A/Victoria/2570/2019 propagated in eggs
Method: single particle / : Borowska A, Kang H, Slotboom DJ, Daniels R

PDB-9tq7:
Neuraminidase NA isolated from the H1N1 strain A/Victoria/2570/2019 propagated in eggs
Method: single particle / : Borowska A, Kang H, Slotboom DJ, Daniels R

EMDB-69143:
Cryo-EM structure of human ABCB7 in complex with CoPP:GSH/ADPVO4
Method: single particle / : Ju S, Choi SH, Lee HY, Jin MS

EMDB-69144:
Cryo-EM structures of the human ABCB7 in the apo state
Method: single particle / : Ju S, Choi SH, Lee HY, Jin MS

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more