[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,807 items for (author: yang & tt)

EMDB-64397:
Cryo-EM structure of macaque red cone pigment with Q114N mutation
Method: single particle / : Ohashi S, Kojima A, Fukuda M, Kim S, Kato HE, Kandori H, Katayama K

EMDB-64398:
Cryo-EM structure of macaque green cone pigment with Q114N mutation
Method: single particle / : Ohashi S, Kojima A, Fukuda M, Kim S, Kato HE, Kandori H, Katayama K

EMDB-64399:
Cryo-EM structure of macaque green cone pigment wild type
Method: single particle / : Ohashi S, Kojima A, Fukuda M, Kim S, Kato HE, Kandori H, Katayama K

EMDB-52224:
ROCK2 bound with TDI01
Method: single particle / : Aijia W, Shenghai C, Qinghua L, Yan H, Haohao D, Bisen D

PDB-9hjq:
ROCK2 bound with TDI01
Method: single particle / : Aijia W, Shenghai C, Qinghua L, Yan H, Haohao D, Bisen D

EMDB-71089:
MscS in Glyco-DIBMA Native Nanodiscs (C1 symmetry)
Method: single particle / : Moller E, Britt M, Zhou F, Yang H, Anishkin A, Ernst R, Juan VM, Sukharev S, Matthies D

PDB-9p0o:
MscS in Glyco-DIBMA Native Nanodiscs (C1 symmetry)
Method: single particle / : Moller E, Britt M, Zhou F, Yang H, Anishkin A, Ernst R, Juan VM, Sukharev S, Matthies D

EMDB-67623:
Cryo-EM structure of DddT in closed substrate-free conformation
Method: single particle / : Zhu WJ, Wang P

EMDB-67625:
Cryo-EM structure of DddT G101D in substrate-free outward open conformation
Method: single particle / : Zhu WJ, Wang P

EMDB-67626:
Cryo-EM structure of DddT in closed DMSP-bound conformation
Method: single particle / : Zhu WJ, Wang P

EMDB-67627:
Cryo-EM structure of DddT in closed substrate-free conformation in the presence of potassium ions and dimethylsulfoniopropionate
Method: single particle / : Zhu WJ, Wang P

EMDB-67628:
Cryo-EM structure of DddT G101D in substrate-free inward open conformation
Method: single particle / : Zhu WJ, Wang P

PDB-21ff:
Cryo-EM structure of DddT in closed substrate-free conformation
Method: single particle / : Zhu WJ, Wang P

PDB-21fh:
Cryo-EM structure of DddT G101D in substrate-free outward open conformation
Method: single particle / : Zhu WJ, Wang P

PDB-21fi:
Cryo-EM structure of DddT in closed DMSP-bound conformation
Method: single particle / : Zhu WJ, Wang P

PDB-21fj:
Cryo-EM structure of DddT in closed substrate-free conformation in the presence of potassium ions and dimethylsulfoniopropionate
Method: single particle / : Zhu WJ, Wang P

PDB-21fk:
Cryo-EM structure of DddT G101D in substrate-free inward open conformation
Method: single particle / : Zhu WJ, Wang P

EMDB-71075:
Consensus map of CXCL9-CXCR3-Gi-scFv16
Method: single particle / : Sun D, Masureel M, Johnson M

EMDB-71077:
Focused map of CXCL9-CXCR3
Method: single particle / : Sun D, Masureel M, Johnson M

EMDB-71078:
Focused map of Gi-scFv16 (components of CXCL9-CXCR3-Gi-scFv16)
Method: single particle / : Sun D, Masureel M, Johnson M

EMDB-71079:
Composite map of CXCL9-CXCR3-Gi-scFv16
Method: single particle / : Sun D, Masureel M, Johnson M

EMDB-71080:
Composite map of CXCL10-CXCR3-Gi-scFv16
Method: single particle / : Sun D, Masureel M, Johnson M

EMDB-71081:
Composite map of CXCL11-CXCR3-Gi-scFv16
Method: single particle / : Sun D, Masureel M, Johnson M

EMDB-71082:
consensus map of CXCL11-CXCR3-Gi-scFv16
Method: single particle / : Sun D, Masureel M, Johnson M

EMDB-71083:
Focused map of CXCL11-CXCR3 (components of CXCL11-CXCR3-Gi-scFv16)
Method: single particle / : Sun D, Masureel M, Johnson M

EMDB-71084:
Focused map of Gi_scFv16 (components of CXCL11-CXCR3-Gi-scFv16)
Method: single particle / : Sun D, Masureel M, Johnson M

EMDB-71085:
consensus map of CXCL10-CXCR3-Gi-scFv16
Method: single particle / : Sun D, Masureel M, Johnson M

EMDB-71086:
Focused map of CXCL10-CXCR3 (components of CXCL10-CXCR3-Gi-scFv16)
Method: single particle / : Sun D, Masureel M, Johnson M

EMDB-71087:
Focused map of Gi-scFv16 (components of CXCL10-CXCR3-Gi-scFv16)
Method: single particle / : Sun D, Masureel M, Johnson M

PDB-9p0k:
Composite map of CXCL9-CXCR3-Gi-scFv16
Method: single particle / : Sun D, Masureel M, Johnson M

PDB-9p0l:
Composite map of CXCL10-CXCR3-Gi-scFv16
Method: single particle / : Sun D, Masureel M, Johnson M

PDB-9p0m:
Composite map of CXCL11-CXCR3-Gi-scFv16
Method: single particle / : Sun D, Masureel M, Johnson M

EMDB-72383:
Cryo-EM structure of human VCP/p97-R89W mutant bound to ADP
Method: single particle / : Lehman A, Ahmed S, Mohajeri A, Yang GX, Berezuk AM, Mannar D, Cholak S, Tuttle KS, Bennett JT, Magno JA, Hannibal M, Kovacevic G, Kuburovic V, Lewis MES, Moldovan O, Nelson Z, Raskin S, Vandersteen AM, Roach JC, Subramaniam S, Patel MS

EMDB-72384:
Cryo-EM structure of human VCP/p97-R89W mutant bound to ATPgammaS
Method: single particle / : Lehman A, Ahmed S, Mohajeri A, Yang GX, Berezuk AM, Mannar D, Cholak S, Tuttle KS, Bennett JT, Magno JA, Hannibal M, Kovacevic G, Kuburovic V, Lewis MES, Moldovan O, Nelson Z, Raskin S, Vandersteen AM, Roach JC, Subramaniam S, Patel MS

EMDB-72385:
Cryo-EM structure of human VCP/p97-R89W mutant bound to CB-5083
Method: single particle / : Lehman A, Ahmed S, Mohajeri A, Yang GX, Berezuk AM, Mannar D, Cholak S, Tuttle KS, Bennett JT, Magno JA, Hannibal M, Kovacevic G, Kuburovic V, Lewis MES, Moldovan O, Nelson Z, Raskin S, Vandersteen AM, Roach JC, Subramaniam S, Patel MS

EMDB-72386:
Cryo-EM structure of human VCP/p97-T122P mutant bound to ADP
Method: single particle / : Lehman A, Ahmed S, Mohajeri A, Yang GX, Berezuk AM, Mannar D, Cholak S, Tuttle KS, Bennett JT, Magno JA, Hannibal M, Kovacevic G, Kuburovic V, Lewis MES, Moldovan O, Nelson Z, Raskin S, Vandersteen AM, Roach JC, Subramaniam S, Patel MS

EMDB-72387:
Cryo-EM structure of human VCP/p97-T122P mutant bound to ATPgammaS
Method: single particle / : Lehman A, Ahmed S, Mohajeri A, Yang GX, Berezuk AM, Mannar D, Cholak S, Tuttle KS, Bennett JT, Magno JA, Hannibal M, Kovacevic G, Kuburovic V, Lewis MES, Moldovan O, Nelson Z, Raskin S, Vandersteen AM, Roach JC, Subramaniam S, Patel MS

EMDB-72388:
Cryo-EM structure of human VCP/p97-G128D mutant bound to ADP
Method: single particle / : Lehman A, Ahmed S, Mohajeri A, Yang GX, Berezuk AM, Mannar D, Cholak S, Tuttle KS, Bennett JT, Magno JA, Hannibal M, Kovacevic G, Kuburovic V, Lewis MES, Moldovan O, Nelson Z, Raskin S, Vandersteen AM, Roach JC, Subramaniam S, Patel MS

EMDB-72389:
Cryo-EM structure of human VCP/p97-G128D mutant bound to ATPgS
Method: single particle / : Lehman A, Ahmed S, Mohajeri A, Yang GX, Berezuk AM, Mannar D, Cholak S, Tuttle KS, Bennett JT, Magno JA, Hannibal M, Kovacevic G, Kuburovic V, Lewis MES, Moldovan O, Nelson Z, Raskin S, Vandersteen AM, Roach JC, Subramaniam S, Patel MS

EMDB-72390:
Cryo-EM structure of human VCP/p97-G156D mutant bound to ADP
Method: single particle / : Lehman A, Ahmed S, Mohajeri A, Yang GX, Berezuk AM, Mannar D, Cholak S, Tuttle KS, Bennett JT, Magno JA, Hannibal M, Kovacevic G, Kuburovic V, Lewis MES, Moldovan O, Nelson Z, Raskin S, Vandersteen AM, Roach JC, Subramaniam S, Patel MS

EMDB-72391:
Cryo-EM structure of human VCP/p97-G156D mutant bound to ATPgammaS
Method: single particle / : Lehman A, Ahmed S, Mohajeri A, Yang GX, Berezuk AM, Mannar D, Cholak S, Tuttle KS, Bennett JT, Magno JA, Hannibal M, Kovacevic G, Kuburovic V, Lewis MES, Moldovan O, Nelson Z, Raskin S, Vandersteen AM, Roach JC, Subramaniam S, Patel MS

PDB-9y03:
Cryo-EM structure of human VCP/p97-R89W mutant bound to ADP
Method: single particle / : Lehman A, Ahmed S, Mohajeri A, Yang GX, Berezuk AM, Mannar D, Cholak S, Tuttle KS, Bennett JT, Magno JA, Hannibal M, Kovacevic G, Kuburovic V, Lewis MES, Moldovan O, Nelson Z, Raskin S, Vandersteen AM, Roach JC, Subramaniam S, Patel MS

PDB-9y04:
Cryo-EM structure of human VCP/p97-R89W mutant bound to ATPgammaS
Method: single particle / : Lehman A, Ahmed S, Mohajeri A, Yang GX, Berezuk AM, Mannar D, Cholak S, Tuttle KS, Bennett JT, Magno JA, Hannibal M, Kovacevic G, Kuburovic V, Lewis MES, Moldovan O, Nelson Z, Raskin S, Vandersteen AM, Roach JC, Subramaniam S, Patel MS

PDB-9y05:
Cryo-EM structure of human VCP/p97-R89W mutant bound to CB-5083
Method: single particle / : Lehman A, Ahmed S, Mohajeri A, Yang GX, Berezuk AM, Mannar D, Cholak S, Tuttle KS, Bennett JT, Magno JA, Hannibal M, Kovacevic G, Kuburovic V, Lewis MES, Moldovan O, Nelson Z, Raskin S, Vandersteen AM, Roach JC, Subramaniam S, Patel MS

PDB-9y06:
Cryo-EM structure of human VCP/p97-T122P mutant bound to ADP
Method: single particle / : Lehman A, Ahmed S, Mohajeri A, Yang GX, Berezuk AM, Mannar D, Cholak S, Tuttle KS, Bennett JT, Magno JA, Hannibal M, Kovacevic G, Kuburovic V, Lewis MES, Moldovan O, Nelson Z, Raskin S, Vandersteen AM, Roach JC, Subramaniam S, Patel MS

PDB-9y07:
Cryo-EM structure of human VCP/p97-T122P mutant bound to ATPgammaS
Method: single particle / : Lehman A, Ahmed S, Mohajeri A, Yang GX, Berezuk AM, Mannar D, Cholak S, Tuttle KS, Bennett JT, Magno JA, Hannibal M, Kovacevic G, Kuburovic V, Lewis MES, Moldovan O, Nelson Z, Raskin S, Vandersteen AM, Roach JC, Subramaniam S, Patel MS

PDB-9y08:
Cryo-EM structure of human VCP/p97-G128D mutant bound to ADP
Method: single particle / : Lehman A, Ahmed S, Mohajeri A, Yang GX, Berezuk AM, Mannar D, Cholak S, Tuttle KS, Bennett JT, Magno JA, Hannibal M, Kovacevic G, Kuburovic V, Lewis MES, Moldovan O, Nelson Z, Raskin S, Vandersteen AM, Roach JC, Subramaniam S, Patel MS

PDB-9y09:
Cryo-EM structure of human VCP/p97-G128D mutant bound to ATPgS
Method: single particle / : Lehman A, Ahmed S, Mohajeri A, Yang GX, Berezuk AM, Mannar D, Cholak S, Tuttle KS, Bennett JT, Magno JA, Hannibal M, Kovacevic G, Kuburovic V, Lewis MES, Moldovan O, Nelson Z, Raskin S, Vandersteen AM, Roach JC, Subramaniam S, Patel MS

PDB-9y0b:
Cryo-EM structure of human VCP/p97-G156D mutant bound to ADP
Method: single particle / : Lehman A, Ahmed S, Mohajeri A, Yang GX, Berezuk AM, Mannar D, Cholak S, Tuttle KS, Bennett JT, Magno JA, Hannibal M, Kovacevic G, Kuburovic V, Lewis MES, Moldovan O, Nelson Z, Raskin S, Vandersteen AM, Roach JC, Subramaniam S, Patel MS

PDB-9y0c:
Cryo-EM structure of human VCP/p97-G156D mutant bound to ATPgammaS
Method: single particle / : Lehman A, Ahmed S, Mohajeri A, Yang GX, Berezuk AM, Mannar D, Cholak S, Tuttle KS, Bennett JT, Magno JA, Hannibal M, Kovacevic G, Kuburovic V, Lewis MES, Moldovan O, Nelson Z, Raskin S, Vandersteen AM, Roach JC, Subramaniam S, Patel MS

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more