[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 238 items for (author: yang & tl)

EMDB-72964:
Cryo-EM structure of IDH1 R132H
Method: single particle / : Hu L, Seo HS, Dhe-Paganon S, Berezuk AM, Tuttle KS, Zhu X, Subramaniam S, Wu X

EMDB-72965:
Cryo-EM structure of IDH1 R132H C269S
Method: single particle / : Hu L, Seo HS, Dhe-Paganon S, Berezuk AM, Tuttle KS, Zhu X, Subramaniam S, Wu X

PDB-9yha:
Cryo-EM structure of IDH1 R132H
Method: single particle / : Hu L, Seo HS, Dhe-Paganon S, Berezuk AM, Tuttle KS, Zhu X, Subramaniam S, Wu X

PDB-9yhb:
Cryo-EM structure of IDH1 R132H C269S
Method: single particle / : Hu L, Seo HS, Dhe-Paganon S, Berezuk AM, Tuttle KS, Zhu X, Subramaniam S, Wu X

PDB-10fm:
CryoEM structure of Aldehyde dehydrogenase from Francisella tularensis subsp. tularensis at 3.03A resolution
Method: single particle / : Abendroth J, Davies DR, Yang M, Hoarnyi PS, Lorimer DD, Edwards TE, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-74225:
CryoEM structure of aldehyde dehydrogenase from Burkholderia cenocepacia at 2.33A resolution
Method: single particle / : Davies DR, Abendroth J, Yang M, Edwards TE, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-9zh8:
CryoEM structure of aldehyde dehydrogenase from Burkholderia cenocepacia at 2.33A resolution
Method: single particle / : Davies DR, Abendroth J, Yang M, Edwards TE, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-64503:
Bacteroides fragilis T6SS effector-immunity BteO-BtiO complex
Method: single particle / : He J, Gao X

EMDB-71559:
Cryo-EM structure of CCR6 bound by PF-07054894 and OXM2
Method: single particle / : Wasilko DJ, Wu H

PDB-9pee:
Cryo-EM structure of CCR6 bound by PF-07054894 and OXM2
Method: single particle / : Wasilko DJ, Wu H

PDB-9q0d:
CryoEM structure of methylmalonic acid semialdehyde dehydrogenase from Burkholderia cenocepacia at 2.38A resolution
Method: single particle / : Abendroth J, Davies DR, Yang M, Hoarnyi PS, Lorimer DD, Edwards TE, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-45301:
mouse Seipin/Adig complex
Method: single particle / : Li C, Han Y, Wynn RM, Chen Z, Scherer PE

EMDB-45302:
mouse Seipin complex
Method: single particle / : Li C, Han Y, Wynn RM, Chen Z, Scherer PE

PDB-9c8d:
mouse Seipin/Adig complex
Method: single particle / : Li C, Han Y, Wynn RM, Chen Z, Scherer PE

PDB-9c8e:
mouse Seipin complex
Method: single particle / : Li C, Han Y, Wynn RM, Chen Z, Scherer PE

EMDB-49092:
Structure of the Rattus norvegicus ACE2 receptor bound HsItaly2011 RBD complex
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-49093:
Eptesicus fuscus ACE2 peptidase domain bound to VsCoV-a7 RBD complex
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-9n7d:
Structure of the Rattus norvegicus ACE2 receptor bound HsItaly2011 RBD complex
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-9n7e:
Eptesicus fuscus ACE2 peptidase domain bound to VsCoV-a7 RBD complex
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-39984:
Cryo-EM structure of Mycobacteriophage Douge genome-packed vertex (gp8 and gp113)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39990:
Cryo-EM structure of Mycobacteriophage Douge genome-free vertex (gp8)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-60714:
Cryo-EM structure of Mycobacteriophage Douge genome-packed connector-vertex (gp5, gp8, gp9, gp10, gp12, gp13 and gp113
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-60715:
Cryo-EM structure of Mycobacteriophage Douge genome-free connector vertex (gp5, gp8, gp9, gp10, gp12 and gp13)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39973:
Cryo-EM structure of Mycobacteriophage Douge genome-packed capsid (gp8 and gp113)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39974:
Focused refinement cryo-EM map of Mycobacteriophage Douge genome-packed capsid (Penton region: gp8)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39975:
Focused refinement cryo-EM map of Mycobacteriophage Douge genome-packed capsid (P-hexon region: gp8 and gp113)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39976:
Focused refinement cryo-EM map of Mycobacteriophage Douge genome-packed capsid (C-hexon region: gp8 and gp113)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39977:
Composite cryo-EM map of Mycobacteriophage Douge genome-packed capsid (Penton, P-hexon and C-hexon region: gp8 and gp113)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39978:
Cryo-EM structure of Mycobacteriophage Douge genome-free capsid (gp8)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39979:
Focused refinement cryo-EM map of Mycobacteriophage Douge genome-free capsid (Penton region: gp8)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39980:
Focused refinement cryo-EM map of Mycobacteriophage Douge genome-free capsid (P-hexon region: gp8)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39981:
Focused refinement cryo-EM map of Mycobacteriophage Douge genome-free capsid (C-hexon region: gp8)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39982:
Composite cryo-EM map of Mycobacteriophage Douge genome-free capsid (Penton, P-hexon and C-hexon region: gp8)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39983:
Cryo-EM structure of Mycobacteriophage Douge genome-packed connector (gp5, gp9, gp10, gp12 and gp13)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39985:
Focused refinement cryo-EM map of Mycobacteriophage Douge genome-packed connector (gp5 and gp9)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39986:
Focused refinement cryo-EM map of Mycobacteriophage Douge genome-packed connector (gp10, gp12 and gp13)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39987:
Focused refinement cryo-EM map of Mycobacteriophage Douge genome-packed connector (gp8 and gp113)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39988:
Composite cryo-EM map of Mycobacteriophage Douge genome-packed connector-vertex (gp5, gp9, gp10, gp12, gp13, gp8 and gp113)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39989:
Cryo-EM structure of Mycobacteriophage Douge genome-free connector (gp5, gp9, gp10, gp12 and gp13)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39991:
Focused refinement cryo-EM map of Mycobacteriophage Douge genome-free connector (gp5 and gp9)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39992:
Focused refinement cryo-EM map of Mycobacteriophage Douge genome-free connector (gp10, gp12 and gp13)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39993:
Focused refinement cryo-EM map of Mycobacteriophage Douge genome-free connector (gp8)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39994:
Composite cryo-EM map of Mycobacteriophage Douge genome-free connector-vertex (gp5, gp9, gp10, gp12, gp13 and gp8)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39995:
Cryo-EM structure of Mycobacteriophage Douge genome-free tail tube (gp13)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39996:
Cryo-EM structure of Mycobacteriophage Douge baseplate (gp13, gp17, gp23, gp16, gp18 and gp20)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39997:
Focused refinement cryo-EM map of Mycobacteriophage Douge baseplate (gp13)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39998:
Focused refinement cryo-EM map of Mycobacteriophage Douge baseplate (gp17 and gp23)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-39999:
Focused refinement cryo-EM map of Mycobacteriophage Douge baseplate (gp16, gp18 and gp20)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-60000:
Composite cryo-EM map of Mycobacteriophage Douge baseplate (gp13, gp17, gp23, gp16, gp18 and gp20)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

EMDB-60001:
Cryo-EM structure of Mycobacteriophage Douge Central fiber (gp20)
Method: single particle / : Maharana J, Wang CH, Tsai LA, Lowary TL, Ho MC

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more