[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 703 items for (author: xie & q)

EMDB-37467:
SARS-CoV-2 Omicron BQ.1.1 RBD complexed with human ACE2

EMDB-37468:
SARS-CoV-2 Omicron BQ.1 RBD complexed with human ACE2

EMDB-37469:
SARS-CoV-2 Omicron XBB RBD complexed with human ACE2

EMDB-37470:
SARS-CoV-2 Omicron BF.7 RBD complexed with human ACE2

EMDB-37471:
SARS-CoV-2 Omicron XBB.1.5 RBD complexed with human ACE2 and S304

PDB-8wdy:
SARS-CoV-2 Omicron BQ.1.1 RBD complexed with human ACE2

PDB-8wdz:
SARS-CoV-2 Omicron BQ.1 RBD complexed with human ACE2

PDB-8we0:
SARS-CoV-2 Omicron XBB RBD complexed with human ACE2

PDB-8we1:
SARS-CoV-2 Omicron BF.7 RBD complexed with human ACE2

PDB-8we4:
SARS-CoV-2 Omicron XBB.1.5 RBD complexed with human ACE2 and S304

EMDB-38617:
SARS-CoV-2 RBD + IMCAS-123 + IMCAS-72 Fab

EMDB-38618:
SARS-CoV-2 RBD + IMCAS-364 + hACE2

EMDB-38619:
SARS-CoV-2 RBD + IMCAS-364 (Local Refinement)

EMDB-38620:
SARS-CoV-2 Omicron BA.4 RBD + IMCAS-316 + ACE2

EMDB-38621:
SARS-CoV-2 spike + IMCAS-123

EMDB-38823:
Cryo-EM structure of the 123-316 scDb/PT-RBD complex

PDB-8xse:
SARS-CoV-2 RBD + IMCAS-123 + IMCAS-72 Fab

PDB-8xsf:
SARS-CoV-2 RBD + IMCAS-364 + hACE2

PDB-8xsi:
SARS-CoV-2 RBD + IMCAS-364 (Local Refinement)

PDB-8xsj:
SARS-CoV-2 Omicron BA.4 RBD + IMCAS-316 + ACE2

PDB-8xsl:
SARS-CoV-2 spike + IMCAS-123

PDB-8y0y:
Cryo-EM structure of the 123-316 scDb/PT-RBD complex

EMDB-37944:
Structure of 26RFa-pyroglutamylated RFamide peptide receptor complex

PDB-8wz2:
Structure of 26RFa-pyroglutamylated RFamide peptide receptor complex

EMDB-37249:
Cryo-EM structure of EBV gH/gL-gp42 in complex with fab 2C1

PDB-8khr:
Cryo-EM structure of EBV gH/gL-gp42 in complex with fab 2C1

EMDB-36730:
SARS-CoV-2 Spike RBD (dimer) in complex with two 2S-1244 nanobodies

EMDB-36735:
Dimer of SARS-CoV-2 BA.2 spike and IBT-CoV144(C3 symmetry)

EMDB-36740:
Dimer of SARS-CoV-2 BA.2 spike and IBT-CoV144(C1 symmetry)

PDB-8jys:
SARS-CoV-2 Spike RBD (dimer) in complex with two 2S-1244 nanobodies

EMDB-42528:
CryoEM structure of A/Perth/16/2009 H3 in complex with flu HA central stem VH1-18 antibody UCA6

EMDB-42529:
CryoEM structure of A/Michigan/45/2015 H1 in complex with flu HA central stem VH1-18 antibody 09-1B12

EMDB-42530:
CryoEM structure of A/Michigan/45/2015 H1 in complex with flu HA central stem VH1-18 antibody UCA6_N55T

EMDB-42531:
CryoEM structure of A/Perth/16/2009 H3 in complex with polyclonal Fab from mice immunized with H3 stem nanoparticles-15 days post immunization

EMDB-42532:
CryoEM structure of A/Perth/16/2009 H3 in complex with polyclonal Fab from mice immunized with H3 stem nanoparticles-28 days post immunization

EMDB-42533:
CryoEM structure of A/Shanghai/1/2013 H7 in complex with polyclonal Fab from mice immunized with H7 stem nanoparticles-15 days post-immunization

EMDB-42534:
CryoEM structure of A/Shanghai/1/2013 H7 in complex with polyclonal Fab from mice immunized with H7 stem nanoparticles-28 days post immunization

EMDB-42535:
CryoEM structure of A/Perth/16/2009 H3

EMDB-42536:
CryoEM map of A/Shanghai/1/2013 H7 HA

PDB-8ut3:
CryoEM structure of A/Perth/16/2009 H3 in complex with flu HA central stem VH1-18 antibody UCA6

PDB-8ut4:
CryoEM structure of A/Michigan/45/2015 H1 in complex with flu HA central stem VH1-18 antibody 09-1B12

PDB-8ut5:
CryoEM structure of A/Michigan/45/2015 H1 in complex with flu HA central stem VH1-18 antibody UCA6_N55T

PDB-8ut6:
CryoEM structure of A/Perth/16/2009 H3 in complex with polyclonal Fab from mice immunized with H3 stem nanoparticles-15 days post immunization

PDB-8ut7:
CryoEM structure of A/Perth/16/2009 H3 in complex with polyclonal Fab from mice immunized with H3 stem nanoparticles-28 days post immunization

PDB-8ut8:
CryoEM structure of A/Shanghai/1/2013 H7 in complex with polyclonal Fab from mice immunized with H7 stem nanoparticles-15 days post-immunization

PDB-8ut9:
CryoEM structure of A/Shanghai/1/2013 H7 in complex with polyclonal Fab from mice immunized with H7 stem nanoparticles-28 days post immunization

EMDB-41314:
Structure of Gabija AB complex

EMDB-41319:
Structure of Gabija AB complex

EMDB-41321:
Structure of Gabija AB complex 1

PDB-8tjy:
Structure of Gabija AB complex

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more