[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 18 items for (author: woodson & m)

EMDB-43792:
phi29 empty capsid lacking pentons and portal
Method: single particle / : Woodson ME, Morais MC, Seth S, Zhang W, Jardine PJ

EMDB-43793:
phi29 empty capsid maturation intermediate with wild-type pRNA
Method: single particle / : Woodson ME, Morais MC, Zhang W, Jardine PJ

EMDB-28820:
phi-29 prohead MCP gp8 penton maturation intermediate, with associated scaffold gp7 tetramer
Method: single particle / : Woodson ME, Morais MC, Jardine PJ, Zhang W, Prokhorov NS

EMDB-28821:
bacteriophage phi-29 MCP gp-8 penton in intermediate maturation state, with associated scaffold gp7 dimer
Method: single particle / : Woodson ME, Morais MC, Prokhorov NS, Zhang W, Jardine PJ

EMDB-28822:
Phi-29 scaffolding protein bound to intermediate-state MCP
Method: single particle / : Woodson ME, Morais MC, Jardine PJ, Scott SD

EMDB-28823:
Phi-29 partially-expanded fiberless prohead
Method: single particle / : Woodson ME, Morais MC, Scott SD, Choi KH, Jardine PJ, Zhang W

EMDB-28824:
Phi-29 expanded, DNA-packaged fiberless prohead
Method: single particle / : Woodson ME, Morais MC, Jardine PJ, Zhang W

PDB-8f2m:
Phi-29 scaffolding protein bound to intermediate-state MCP
Method: single particle / : Woodson ME, Morais MC, Jardine PJ, Scott SD

PDB-8f2n:
Phi-29 partially-expanded fiberless prohead
Method: single particle / : Woodson ME, Morais MC, Scott SD, Choi KH, Jardine PJ, Zhang W

PDB-8f2o:
Phi-29 expanded, DNA-packaged fiberless prohead
Method: single particle / : Woodson ME, Morais MC, Jardine PJ, Zhang W

EMDB-22441:
The bacteriophage Phi-29 viral genome packaging motor assembly
Method: single particle / : White MA, Woodson M

PDB-7jqq:
The bacteriophage Phi-29 viral genome packaging motor assembly
Method: single particle / : White MA, Woodson M, Morais MC

EMDB-0481:
Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit
Method: single particle / : Razi A, Davis JH, Hao Y, Jahagirdar D, Thurlow B, Basu K, Jain N, Gomez-Blanco J, Britton RA, Vargas J, Guarne A, Woodson SA, Williamson JR, Ortega J

EMDB-0482:
Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit
Method: single particle / : Ortega J, Davis JH, Hao Y, Jahagirdar D, Thurlow B, Basu K, Jain N, Gomez-Blanco J, Britton RA, Vargas J, Guarne A, Woodson SA, Williamson JR

EMDB-0483:
Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit
Method: single particle / : Ortega J, Davis JH, Hao Y, Jahagirdar D, Thurlow B, Basu K, Jain N, Gomez-Blanco J, Britton RA, Vargas J, Guarne A, Woodson SA, Williamson JR

EMDB-0484:
Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit
Method: single particle / : Ortega J, Davis JH, Hao Y, Jahagirdar D, Thurlow B, Basu K, Jain N, Gomez-Blanco J, Britton RA, Vargas J, Guarne A, Woodson SA, Williamson JR

PDB-6nqb:
Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit
Method: single particle / : Ortega J

EMDB-6560:
Bacteriophage phi29 prohead particle stalled during DNA packaging
Method: single particle / : Mao H, Saha M, Reyes-Aldrete E, Sherman M, Woodson M, Jardine PJ, Grimes S, Morais M

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more