[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 95 items for (author: wenli & z)

EMDB-53311:
Cryo-EM map of SKM-70S ribosomal stalled complex in the major state (vacant A-site, canon)
Method: single particle / : Morici M, Corazza M, Safdari HA, Wilson DN

EMDB-53341:
Cryo-EM structure of SKM-70S ribosomal stalled complex in the A-tRNA positioned (Body open) state.
Method: single particle / : Morici M, Corazza M, Safdari HA, Wilson DN

EMDB-55145:
Cryo-EM structure of SKM-70S ribosomal stalled complex in the rotated state with hybrid tRNAs
Method: single particle / : Morici M, Corazza M, Safdari HA, Wilson DN

PDB-9qqq:
Cryo-EM structure of SKM-70S ribosomal stalled complex in the major state (vacant A-site, canon)
Method: single particle / : Morici M, Corazza M, Safdari HA, Wilson DN

PDB-9qsj:
Cryo-EM structure of SKM-70S ribosomal stalled complex in the A-tRNA positioned (Body open) state.
Method: single particle / : Morici M, Corazza M, Safdari HA, Wilson DN

PDB-9sro:
Cryo-EM structure of SKM-70S ribosomal stalled complex in the rotated state with hybrid tRNAs
Method: single particle / : Morici M, Corazza M, Safdari HA, Wilson DN

EMDB-70618:
Cryo-EM structure of the C. neoformans lipid flippase Apt1-Cdc50 bound with butyrolactol A in the E2P state
Method: single particle / : Duan HD, Li H

PDB-9omv:
Cryo-EM structure of the C. neoformans lipid flippase Apt1-Cdc50 bound with butyrolactol A in the E2P state
Method: single particle / : Duan HD, Li H

EMDB-46833:
Negative stain map of cH5/1 apo
Method: single particle / : Han J, Rodriguez AJ, Ward AB

EMDB-46834:
Negative stain map of cH11/1 closed apo
Method: single particle / : Han J, Rodriguez AJ, Ward AB

EMDB-46835:
Negative stain of cH5/1 HA in complex with 31.b.09 Fab
Method: single particle / : Han J, Rodriguez AJ, Ward AB

EMDB-46836:
Negative stain of cH5/1 HA in complex with CR9114 Fab
Method: single particle / : Han J, Rodriguez AJ, Ward AB

EMDB-46837:
Negative stain of cH11/1 HA in complex with 31.b.09 Fab
Method: single particle / : Han J, Rodriguez AJ, Ward AB

EMDB-46838:
Negative stain of cH8/1 HA in complex with 31.b.09 Fab
Method: single particle / : Han J, Rodriguez AJ, Ward AB

EMDB-46839:
Negative stain map of cH8/1 HA in complex with CR9114 Fab
Method: single particle / : Han J, Rodriguez AJ, Ward AB

EMDB-46840:
Negative stain of cH5/1 HA in complex with FluA20 fab
Method: single particle / : Han J, Rodriguez AJ, Ward AB

EMDB-46841:
Negative stain of cH8/1 HA in complex with FluA20 Fab
Method: single particle / : Han J, Rodriguez AJ, Ward AB

EMDB-46842:
Negative stain maps of cH8/1 apo HA
Method: single particle / : Han J, Rodriguez AJ, Ward AB

EMDB-46994:
Cryo-EM structure of the SFV009 3G01 Fab in complex with A/California/04/2009
Method: single particle / : Fernandez Quintero ML, Ferguson JA, Han J, Ward AB

PDB-9dm0:
Cryo-EM structure of the SFV009 3G01 Fab in complex with A/California/04/2009
Method: single particle / : Fernandez Quintero ML, Ferguson JA, Han J, Ward AB

EMDB-62925:
Locally refined region of SARS-CoV-2 spike in complex with antibodies 9G11 and 3E2.
Method: single particle / : Jiang Y, Sun H, Zheng Q, Li S

EMDB-62926:
Structure of SARS-CoV-2 Spike in complex with antibodies 3E2, 9G11 and 13H7.
Method: single particle / : Jiang Y, Sun H, Zheng Q, Li S

PDB-9lae:
Locally refined region of SARS-CoV-2 spike in complex with antibodies 9G11 and 3E2.
Method: single particle / : Jiang Y, Sun H, Zheng Q, Li S

EMDB-47339:
Cryo-EM structure of the C. neoformans lipid flippase Apt1-Cdc50 in the E1 state
Method: single particle / : Duan HD, Li H

PDB-9dzv:
Cryo-EM structure of the C. neoformans lipid flippase Apt1-Cdc50 in the E1 state
Method: single particle / : Duan HD, Li H

EMDB-61825:
Structure of SARS-CoV-2 Spike in complex with antibodies 3E2, 9G11 and 13H7 (C1)
Method: single particle / : Jiang Y, Sun H, Zheng Q, Li S

EMDB-45078:
E.coli GroEL + PBZ1587 inhibitor
Method: single particle / : Watson ER, Lander GC

EMDB-45079:
E.coli GroEL apoenzyme
Method: single particle / : Watson ER, Lander GC

EMDB-45080:
E.Faecium GroEL
Method: single particle / : Watson ER, Lander GC

EMDB-45098:
E.coli GroEL + PBZ1587 inhibitor C1 reconstruction
Method: single particle / : Watson ER, Lander GC

PDB-9c0b:
E.coli GroEL + PBZ1587 inhibitor
Method: single particle / : Watson ER, Lander GC

PDB-9c0c:
E.coli GroEL apoenzyme
Method: single particle / : Watson ER, Lander GC

PDB-9c0d:
E.Faecium GroEL
Method: single particle / : Watson ER, Lander GC

EMDB-35730:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with 8H12
Method: single particle / : Sun H, Jiang Y, Zheng Q, Li S, Xia N

EMDB-35731:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with 3E2
Method: single particle / : Sun H, Jiang Y, Zheng Q, Li S, Xia N

EMDB-35736:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs 8H12 and 1C4
Method: single particle / : Sun H, Jiang Y, Zheng Q, Li S, Xia N

EMDB-35739:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs 3E2 and 1C4
Method: single particle / : Sun H, Jiang Y, Zheng Q, Li S, Xia N

EMDB-35740:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs 8H12 and 3E2 (local refinement)
Method: single particle / : Sun H, Jiang Y, Zheng Q, Li S, Xia N

EMDB-35741:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs 8H12 and 1C4 (local refinement)
Method: single particle / : Sun H, Jiang Y, Zheng Q, Li S, Xia N

EMDB-35743:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs 8H12 and 3E2
Method: single particle / : Sun H, Jiang Y, Zheng Q, Li S, Xia N

EMDB-35745:
cryo-EM structure of SARS-CoV-2 Omicron BA.1 spike protein in complex with double nAbs 8H12 and 3E2
Method: single particle / : Sun H, Jiang Y, Zheng Q, Li S, Xia N

EMDB-35746:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs 3E2 and 1C4 (local refinement)
Method: single particle / : Sun H, Jiang Y, Zheng Q, Li S, Xia N

EMDB-35747:
cryo-EM structure of SARS-CoV-2 Omicron BA.2 spike protein in complex with double nAbs 8H12 and 3E2
Method: single particle / : Sun H, Jiang Y, Zheng Q, Li S, Xia N

EMDB-35749:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs XMA01 and 3E2
Method: single particle / : Sun H, Jiang Y, Zheng Q, Li S, Xia N

EMDB-35750:
cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs S2E12 and 3E2
Method: single particle / : Sun H, Jiang Y, Zheng Q, Li S, Xia N

EMDB-35751:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs S2E12 and 3E2 (local refinement)
Method: single particle / : Sun H, Jiang Y, Zheng Q, Li S, Xia N

EMDB-35752:
cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs 8H12 and S2X35
Method: single particle / : Sun H, Jiang Y, Zheng Q, Li S, Xia N

EMDB-35753:
cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs 8H12 and VacW-209
Method: single particle / : Sun H, Jiang Y, Zheng Q, Li S, Xia N

EMDB-35754:
cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs 8H12 and S2X35 (local refinement)
Method: single particle / : Sun H, Jiang Y, Zheng Q, Li S, Xia N

EMDB-35755:
Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs XMA01 and 3E2 (local refinement)
Method: single particle / : Sun H, Jiang Y, Zheng Q, Li S, Xia N

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more