[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 199 items for (author: wang & yd)

EMDB-70618:
Cryo-EM structure of the C. neoformans lipid flippase Apt1-Cdc50 bound with butyrolactol A in the E2P state
Method: single particle / : Duan HD, Li H

PDB-9omv:
Cryo-EM structure of the C. neoformans lipid flippase Apt1-Cdc50 bound with butyrolactol A in the E2P state
Method: single particle / : Duan HD, Li H

EMDB-49393:
In-situ cryo-EM structure of outer membrane cap (OMC) of the Dot/Icm machine
Method: single particle / : Yue J, Jun L

EMDB-49394:
In-situ cryo-EM structure of periplasmic ring (PR) of the Dot/Icm machine
Method: single particle / : Yue J, Jun L

EMDB-49395:
In-situ cryo-EM structure of Dome of the Dot/Icm machine
Method: single particle / : Yue J, Liu J

EMDB-49396:
In-situ cryo-EM structure of protochannel of the Dot/Icm machine
Method: single particle / : Yue J, Liu J

EMDB-49398:
In-situ cryo-EM structure of PR and DotA-IcmX of the Dot/Icm machine at C1
Method: single particle / : Yue J, Liu J

EMDB-49399:
In-situ cryo-EM structure of porinI of the Dot/Icm machine
Method: single particle / : Yue J, Liu J

PDB-9ngu:
In situ cryo-EM structure of outer membrane cap (OMC) of the Legionella Dot/Icm T4SS machine
Method: single particle / : Yue J, Jun L

PDB-9ngv:
In situ cryo-EM structure of periplasmic ring (PR) of the Legionella Dot/Icm T4SS machine.
Method: single particle / : Yue J, Jun L

PDB-9ngw:
In-situ cryo-EM structure of Dome of the Legionella Dot/Icm machine
Method: single particle / : Yue J, Liu J

PDB-9ngy:
In situ cryo-EM structure of protochannel (DotA-IcmX) of the Legionella Dot/Icm T4SS machine
Method: single particle / : Yue J, Liu J

PDB-9nh0:
In situ cryo-EM structure of PR and DotA-IcmX of the Legionella Dot/Icm T4SS machine at C1 symmetry
Method: single particle / : Yue J, Liu J

PDB-9nh1:
In situ cryo-EM structure of porin I of the Legionella Dot/Icm T4SS machine
Method: single particle / : Yue J, Liu J

PDB-9nh2:
In situ cryo-EM structure of porin III of the Legionella Dot/Icm T4SS machine
Method: single particle / : Yue J, Liu J

EMDB-48650:
Structure of HKU5 spike C-terminal domain in complex with ACE2 from Pipistrellus abramus
Method: single particle / : Li N, Tsybovsky Y, Teng I, Zhou T

PDB-9mv0:
Structure of HKU5 spike C-terminal domain in complex with ACE2 from Pipistrellus abramus
Method: single particle / : Li N, Tsybovsky Y, Teng I, Zhou T

EMDB-29811:
Cryo-EM structure of full length Neuroligin-2 from Mouse
Method: single particle / : Boyd R, Wang W

EMDB-29829:
Cryo-EM structure of full length Neuroligin-2 from Mouse bound to two Neurexin-1 Beta conformation one
Method: single particle / : Boyd R, Wang W

EMDB-29830:
Cryo-EM structure of full length Neuroligin-2 from Mouse bound to two Neurexin-1 Beta conformation two
Method: single particle / : Boyd R, Wang W

EMDB-29831:
Cryo-EM structure of full length Neuroligin-2 from Mouse bound to two Neurexin-1 Beta conformation three
Method: single particle / : Boyd R, Wang W

PDB-8g7d:
Cryo-EM structure of full length Neuroligin-2 from Mouse
Method: single particle / : Boyd R, Wang W

PDB-8g7z:
Cryo-EM structure of full length Neuroligin-2 from Mouse bound to two Neurexin-1 Beta conformation one
Method: single particle / : Boyd R, Wang W

PDB-8g80:
Cryo-EM structure of full length Neuroligin-2 from Mouse bound to two Neurexin-1 Beta conformation two
Method: single particle / : Boyd R, Wang W

PDB-8g81:
Cryo-EM structure of full length Neuroligin-2 from Mouse bound to two Neurexin-1 Beta conformation three
Method: single particle / : Boyd R, Wang W

EMDB-29828:
Cryo-EM Structure of full length Neuroligin-2 from mouse with Neurexin-1 beta
Method: single particle / : Boyd R, Wang W

PDB-8g7y:
Cryo-EM Structure of full length Neuroligin-2 from mouse with Neurexin-1 beta
Method: single particle / : Boyd R, Wang W

EMDB-47700:
ACKR3 phosphorylated by GRK5 in complex with arrestin2 and Fab7
Method: single particle / : Chen Q, Fuller J, Tesmer JJG

EMDB-49564:
cryoEM structure of human ACKR3 phosphorylated by GRK2 in complex with Arr2
Method: single particle / : Chen Q, Tesmer JJG

PDB-9e82:
ACKR3 phosphorylated by GRK5 in complex with arrestin2 and Fab7
Method: single particle / : Chen Q, Fuller J, Tesmer JJG

EMDB-47339:
Cryo-EM structure of the C. neoformans lipid flippase Apt1-Cdc50 in the E1 state
Method: single particle / : Duan HD, Li H

PDB-9dzv:
Cryo-EM structure of the C. neoformans lipid flippase Apt1-Cdc50 in the E1 state
Method: single particle / : Duan HD, Li H

EMDB-41290:
Human ACKR3 phosphorylated by GRK5 in complex with Arrestin3
Method: single particle / : Chen Q, Tesmer JJG

EMDB-41291:
Human ACKR3 phosphorylated by GRK2 in complex with Arrestin3
Method: single particle / : Chen Q, Tesmer JJG

EMDB-41292:
Human ACKR3 with C tail extended by 12 glycines phosphorylated by GRK5 in complex with Arrestin2
Method: single particle / : Chen Q, Tesmer JJG

EMDB-41289:
Human ACKR3 phosphorylated by GRK2 in complex with Arrestin2 in nanodisc
Method: single particle / : Chen Q, Tesmer JJG

EMDB-41295:
Human ACKR3 phosphorylated by GRK5 in complex with Arrestin3 reconstructed without receptor/micelle
Method: single particle / : Chen Q, Tesmer JJG

EMDB-41296:
Human ACKR3 phosphorylated by GRK2 in complex with Arrestin3 reconstructed without receptor/micelle
Method: single particle / : Chen Q, Tesmer JJG

EMDB-41297:
Human ACKR3 with C tail extended by 12 glycines phosphorylated by GRK5 in complex with Arrestin2 reconstructed without receptor/micelle
Method: single particle / : Chen Q, Tesmer JJG

EMDB-43277:
cryoEM structure of human ACKR3 phosphorylated by GRK5 in complex with Arrestin3 variant with the C edge loop from Arrestin2 inserted
Method: single particle / : Chen Q, Tesmer JJG

PDB-8tii:
Human ACKR3 phosphorylated by GRK2 in complex with Arrestin2 in nanodisc
Method: single particle / : Chen Q, Tesmer JJG

PDB-8til:
Human ACKR3 phosphorylated by GRK5 in complex with Arrestin3 reconstructed without receptor/micelle
Method: single particle / : Chen Q, Tesmer JJG

PDB-8tin:
Human ACKR3 phosphorylated by GRK2 in complex with Arrestin3 reconstructed without receptor/micelle
Method: single particle / : Chen Q, Tesmer JJG

PDB-8tio:
Human ACKR3 with C tail extended by 12 glycines phosphorylated by GRK5 in complex with Arrestin2 reconstructed without receptor/micelle
Method: single particle / : Chen Q, Tesmer JJG

PDB-8vj9:
CryoEM structure of human ACKR3 phosphorylated by GRK5 in complex with Arrestin3 variant with the C edge loop from Arrestin2 inserted
Method: single particle / : Chen Q, Tesmer JJG

EMDB-18764:
SWR1-hexasome complex
Method: single particle / : Jalal ASB, Wigley DB

EMDB-18769:
SWR1-hexasome-dimer complex
Method: single particle / : Jalal ASB, Wigley DB

EMDB-50297:
SWR1 lacking Swc5 subunit in complex with hexasome
Method: single particle / : Jalal ASB, Wigley DB

EMDB-44812:
RO76 bound muOR-Gi1-scFv16 complex structure
Method: single particle / : Wang H, Majumdar S, Kobilka BK

PDB-9bqj:
RO76 bound muOR-Gi1-scFv16 complex structure
Method: single particle / : Wang H, Majumdar S, Kobilka BK

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more