[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 79 items for (author: walker & lm)

EMDB-46788:
VFLIP Spike Trimer with 4C12-B12
Method: single particle / : Sobti M, Stewart AG

EMDB-19011:
Human PADI4 in complex with cyclic peptide PADI4_3
Method: single particle / : Benton DJ, Bertran MT, Walport LJ

EMDB-19012:
Human PADI4 in complex with cyclic peptide PADI4_11
Method: single particle / : Benton DJ, Bertran MT, Walport LJ

PDB-8r8u:
Human PADI4 in complex with cyclic peptide PADI4_3
Method: single particle / : Benton DJ, Bertran MT, Walport LJ

PDB-8r8v:
Human PADI4 in complex with cyclic peptide PADI4_11
Method: single particle / : Benton DJ, Bertran MT, Walport LJ

EMDB-44451:
Influenza A virus Hemagglutinin H3/Darwin/6/2021 in complex with Fab ADI-85666
Method: single particle / : Ferreira Ramos AS, Bajic G

EMDB-44452:
Influenza A virus Hemagglutinin H3/Darwin/6/2021 in complex with Fab ADI-85647
Method: single particle / : Ferreira Ramos AS, Bajic G

EMDB-43551:
CCHFV GP38 bound with ADI-46143 and ADI-46158 Fabs
Method: single particle / : Hjorth CK, McLellan JS

EMDB-43552:
CCHFV GP38 bound with ADI-58062 and ADI-63530 Fabs
Method: single particle / : Hjorth CK, McLellan JS

EMDB-43553:
CCHFV GP38 bound with ADI-58026 and ADI-63547 Fabs
Method: single particle / : Hjorth CK, McLellan JS

EMDB-43604:
CCHFV GP38 bound to ADI-46152 and ADI-58048 Fabs
Method: single particle / : Hjorth CK, McLellan JS

EMDB-29930:
T. cruzi topoisomerase II alpha bound to dsDNA and the covalent inhibitor CT1
Method: single particle / : Schenk A, Deniston C, Noeske J

PDB-8gcc:
T. cruzi topoisomerase II alpha bound to dsDNA and the covalent inhibitor CT1
Method: single particle / : Schenk A, Deniston C, Noeske J

EMDB-27538:
Lymphocytic choriomeningitis virus glycoprotein in complex with neutralizing antibody M28
Method: single particle / : Moon-Walker A, Hastie KM, Zyla DS, Saphire EO

EMDB-27539:
Lymphocytic choriomeningitis virus glycoprotein
Method: single particle / : Moon-Walker A, Hastie KM, Zyla DS, Saphire EO

PDB-8dmh:
Lymphocytic choriomeningitis virus glycoprotein in complex with neutralizing antibody M28
Method: single particle / : Moon-Walker A, Hastie KM, Zyla DS, Saphire EO

PDB-8dmi:
Lymphocytic choriomeningitis virus glycoprotein
Method: single particle / : Moon-Walker A, Hastie KM, Zyla DS, Saphire EO

EMDB-26653:
Native Lassa glycoprotein in complex with neutralizing antibodies 8.9F and 37.2D
Method: single particle / : Li H, Saphire EO

EMDB-26655:
Native Lassa glycoprotein in complex with neutralizing antibodies 12.1F and 37.2D
Method: single particle / : Li H, Saphire EO

PDB-7uot:
Native Lassa glycoprotein in complex with neutralizing antibodies 8.9F and 37.2D
Method: single particle / : Li H, Saphire EO

PDB-7uov:
Native Lassa glycoprotein in complex with neutralizing antibodies 12.1F and 37.2D
Method: single particle / : Li H, Saphire EO

EMDB-27024:
Prefusion-stabilized hMPV fusion protein bound to ADI-61026 and MPE8 Fabs
Method: single particle / : Hsieh CL, McLellan JS

EMDB-26458:
Structure of lineage I (Pinneo) Lassa virus glycoprotein bound to Fab 25.10C
Method: single particle / : Buck TK, Enriquez AE, Hastie KM

EMDB-26594:
Lineage I (Pinneo) Lassa virus glycoprotein bound to 18.5C-M30 Fab
Method: single particle / : Buck TK, Enriquez AS, Hastie KM

PDB-7uds:
Structure of lineage I (Pinneo) Lassa virus glycoprotein bound to Fab 25.10C
Method: single particle / : Buck TK, Enriquez AE, Hastie KM

PDB-7ul7:
Lineage I (Pinneo) Lassa virus glycoprotein bound to 18.5C-M30 Fab
Method: single particle / : Buck TK, Enriquez AS, Hastie KM

EMDB-26195:
Structure of Lassa Virus glycoprotein (Josiah) bound to Fab 25.10C
Method: single particle / : Enriquez AS, Hastie KM

PDB-7tyv:
Structure of Lassa Virus glycoprotein (Josiah) bound to Fab 25.10C
Method: single particle / : Enriquez AS, Hastie KM

EMDB-25574:
SARS-CoV-2 S-RBD + Fab 54042-4
Method: single particle / : Johnson NV, Mclellan JS

EMDB-26064:
SARS-CoV-2 S + Fabs 5317-4 and 5217-10
Method: single particle / : Johnson NV, McLellan JS

EMDB-13316:
HIV-1 Env (BG505 SOSIP.664) in complex with the IgA bNAb 7-269 and the antibody 3BNC117.
Method: single particle / : Fernandez I, Bontems F

EMDB-13332:
HIV-1 Env (BG505 SOSIP.664) in complex with the bNAb 7-176
Method: single particle / : Bontems F, Fernandez I, Pehau-Arnaudet G, Rey F

EMDB-13333:
HIV-1 Env (BG505 SOSIP.664) in complex with the bNAb 7-155
Method: single particle / : Bontems F, Fernandez I, Pehau-Arnaudet G, Rey F

EMDB-23160:
Prefusion-stabilized SARS-CoV-2 spike bound by the engineered human antibody ADG-2
Method: single particle / : Wrapp D, McLellan JS

EMDB-22188:
CryoEM structure of Chimeric Eastern Equine Encephalitis Virus with Fab of EEEV-143 Antibody
Method: single particle / : Williamson LE, Gilliland T, Yadav PK, Binshtein E, Bombardi R, Kose N, Nargi RS, Sutton RM, Armstrong E, Carnahan RH, Walker LM, Kim AS, Fox J, Diamond MS, Ohi M, Klimstra WB, Crowe JE

EMDB-22223:
CryoEM structure of Chimeric Eastern Equine Encephalitis Virus with Fab of EEEV-33 Antibody
Method: single particle / : Williamson LE, Gilliland T, Yadav PK, Binshtein E, Bombardi R, Kose N, Nargi RS, Sutton RM, Armstrong E, Carnahan RH, Walker LM, Kim AS, Fox J, Diamond MS, Ohi M, Klimstra WB, Crowe JE

EMDB-22276:
CryoEM structure of Eastern Equine Encephalitis (EEEV) VLP
Method: single particle / : Binshtein E, Crowe JE

EMDB-22277:
CryoEM structure of Eastern Equine Encephalitis (EEEV) VLP with Fab EEEV-143.
Method: single particle / : Binshtein E, Crowe JE

EMDB-22818:
Cryo-EM structure of Zika virus in complex with E protein cross-linking human monoclonal antibody ADI30056
Method: single particle / : Sevvana M, Rogers TF

EMDB-22913:
Structure of the SARS-CoV-2 S 6P trimer in complex with the ACE2 protein decoy, CTC-445.2 (State 1)
Method: single particle / : Barnes CO, Bjorkman PJ

EMDB-22914:
Structure of the SARS-CoV-2 S 6P trimer in complex with the ACE2 protein decoy, CTC-445.2 (State 2)
Method: single particle / : Barnes CO, Bjorkman PJ

EMDB-22915:
Structure of the SARS-CoV-2 S 6P trimer in complex with the ACE2 protein decoy, CTC-445.2 (State 4)
Method: single particle / : Barnes CO, Bjorkman PJ

EMDB-22916:
Structure of the SARS-CoV-2 S 6P trimer in complex with the ACE2 protein decoy, CTC-445.2 (State 4)
Method: single particle / : Barnes CO, Bjorkman PJ

EMDB-7908:
VIC170 Fab in complex with Ebola virus GP
Method: single particle / : Turner H, Murin CD, Pallesen J, Ward AB

EMDB-7909:
VIC169 Fab in complex with Ebola virus GP
Method: single particle / : Turner H, Murin CD, Pallesen J, Ward AB

EMDB-7910:
VIC167 Fab in complex with Ebola virus GP
Method: single particle / : Turner H, Murin CD, Pallesen J, Ward AB

EMDB-7911:
VIC166 Fab in complex with Ebola virus GP
Method: single particle / : Turner H, Murin CD, Pallesen J, Ward AB

EMDB-7912:
VIC165 Fab in complex with Ebola virus GP
Method: single particle / : Turner H, Murin CD, Pallesen J, Ward AB

EMDB-7914:
VIC1164 Fab in complex with Ebola virus GP
Method: single particle / : Turner H, Murin CD, Pallesen J, Ward AB

EMDB-7915:
VIC163 Fab in complex with Ebola virus GP
Method: single particle / : Turner H, Murin CD, Pallesen J, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more