[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 24,000 items for (author: to & d)

EMDB-71611:
Cryo-EM structure of the respiratory syncytial virus polymerase (L:P) in NTP-bound elongation state
Method: single particle / : Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Liang B

EMDB-71612:
Cryo-EM structure of the respiratory syncytial virus polymerase (L:P) in pre-reaction elongation state
Method: single particle / : Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Liang B

EMDB-71613:
Cryo-EM structure of the respiratory syncytial virus polymerase (L:P) in pre-translocation elongation state
Method: single particle / : Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Liang B

EMDB-71614:
Cryo-EM structure of the respiratory syncytial virus polymerase (L:P) in post-translocation elongation state
Method: single particle / : Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Liang B

PDB-9pfr:
Cryo-EM structure of the respiratory syncytial virus polymerase (L:P) in NTP-bound elongation state
Method: single particle / : Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Liang B

PDB-9pfs:
Cryo-EM structure of the respiratory syncytial virus polymerase (L:P) in pre-reaction elongation state
Method: single particle / : Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Liang B

PDB-9pft:
Cryo-EM structure of the respiratory syncytial virus polymerase (L:P) in pre-translocation elongation state
Method: single particle / : Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Liang B

PDB-9pfu:
Cryo-EM structure of the respiratory syncytial virus polymerase (L:P) in post-translocation elongation state
Method: single particle / : Cao D, Chen Z, Gao Y, Roesler C, Gooneratne I, Liang B

EMDB-57178:
Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10088
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57179:
Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2, UNC10088 and Bach1
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57180:
Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10415667
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57298:
SKP1-FBXO22-UNC10088-NSD2 locally refined Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10088
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57299:
CUL1 locally refined Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10088
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57301:
CUL1 C-term, RBX1 locally refined Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10088
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57302:
Consensus Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10088
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57303:
SKP1-FBXO22-UNC10088-NSD2 locally refined Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10088 and Bach1
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57304:
CUL1-C-terminus-RBX1 locally refined Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10088 and Bach1
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57305:
SKP1-CUL1 locally refined Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10088 and Bach1
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57306:
Consensus Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10088 and Bach1
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57308:
SKP1-FBXO22-UNC10088-NSD2 locally refined Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10415667
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57309:
CUL1 locally refined Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10415667
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57310:
CUL1 C-term, RBX1 locally refined Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10415667
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-57311:
Consensus Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10415667
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

PDB-29hg:
Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10088
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

PDB-29hh:
Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2, UNC10088 and Bach1
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

PDB-29hi:
Cryo-EM structure of the CUL1-RBX1-SKP1-FBXO22 SCF ubiquition ligase in complex with NSD2 via UNC10415667
Method: single particle / : Amann SJ, Robertson KC, Grishkovskaya I, Liu T, James LI, Brown NB, Haselbach D

EMDB-75048:
Human Excitatory Amino Acid Transporter 3 in 300 mM potassium and 0.1 mM Cmpd 3e in the intermediate outward-facing (iOFS) state
Method: single particle / : Earsley A, Qiu B, Boudker O

EMDB-56440:
CryoEM map of chloroplastic photosynthetic NADP(+)-dependent malic enzyme
Method: single particle / : Drakonaki A, Gatsogiannis C

EMDB-56441:
CryoEM map of chloroplastic photosynthetic NADP(+)-dependent malic enzyme mutant (G200R) at pH 8
Method: single particle / : Drakonaki A, Gatsogiannis C

EMDB-56442:
CryoEM map of chloroplastic photosynthetic NADP(+)-dependent malic enzyme mutant (G200R) at pH 4.8
Method: single particle / : Drakonaki A, Gatsogiannis C

EMDB-56443:
CryoEM map of dimeric non-photosynthetic NADP(+)-dependent malic enzyme
Method: single particle / : Drakonaki A, Gatsogiannis C

EMDB-56444:
CryoEM map of tetrameric non-photosynthetic NADP(+)-dependent malic enzyme
Method: single particle / : Drakonaki A, Gatsogiannis C

EMDB-55213:
CryoEM structure of native quinol dependent Nitric Oxide Reductase at pH 6.5
Method: single particle / : Khaja F, Antonyuk SV, Muench SP, Hasnain SS

EMDB-55214:
CryoEM structure of native quinol dependent Nitric Oxide Reductase with HQE at pH 6.5
Method: single particle / : Khaja F, Antonyuk SV, Muench SP, Hasnain SS

EMDB-56718:
CryoEM structure of native quinol dependent Nitric Oxide Reductase at pH 8.0 on gold grid.
Method: single particle / : Khaja F, Antonyuk SV, Muench SP, Hasnain SS

EMDB-56720:
CryoEM structure of native quinol dependent Nitric Oxide Reductase Arg720Ala variant at pH 6.5 on gold grid.
Method: single particle / : Khaja F, Antonyuk SV, Muench SP, Hasnain SS

EMDB-56721:
CryoEM structure of native quinol dependent Nitric Oxide Reductase Trp718Ala variant at pH 6.5 on gold grid.
Method: single particle / : Khaja F, Antonyuk SV, Muench SP, Hasnain SS

EMDB-56722:
CryoEM structure of native quinol dependent Nitric Oxide Reductase Trp718Ala variant with quino at pH 6.5 on gold grid.
Method: single particle / : Khaja F, Antonyuk SV, Muench SP, Hasnain SS

PDB-28pn:
CryoEM structure of native quinol dependent Nitric Oxide Reductase at pH 8.0 on gold grid.
Method: single particle / : Khaja F, Antonyuk SV, Muench SP, Hasnain SS

PDB-28pp:
CryoEM structure of native quinol dependent Nitric Oxide Reductase Arg720Ala variant at pH 6.5 on gold grid.
Method: single particle / : Khaja F, Antonyuk SV, Muench SP, Hasnain SS

PDB-28pq:
CryoEM structure of native quinol dependent Nitric Oxide Reductase Trp718Ala variant at pH 6.5 on gold grid.
Method: single particle / : Khaja F, Antonyuk SV, Muench SP, Hasnain SS

PDB-28pr:
CryoEM structure of native quinol dependent Nitric Oxide Reductase Trp718Ala variant with quino at pH 6.5 on gold grid.
Method: single particle / : Khaja F, Antonyuk SV, Muench SP, Hasnain SS

PDB-9st9:
CryoEM structure of native quinol dependent Nitric Oxide Reductase at pH 6.5
Method: single particle / : Khaja F, Antonyuk SV, Muench SP, Hasnain SS

PDB-9sta:
CryoEM structure of native quinol dependent Nitric Oxide Reductase with HQE at pH 6.5
Method: single particle / : Khaja F, Antonyuk SV, Muench SP, Hasnain SS

EMDB-75840:
Cryo-EM structure of CRBN in complex with HBS1L and TNG-4857 (focused refinement)
Method: single particle / : Whittington DA

PDB-11mr:
Cryo-EM structure of CRBN in complex with HBS1L and TNG-4857 (focused refinement)
Method: single particle / : Whittington DA

EMDB-54277:
Cryo-EM structure of DISC1 core
Method: single particle / : Zhou JC

PDB-9rux:
Cryo-EM structure of DISC1 core
Method: single particle / : Zhou JC

EMDB-66468:
Cryo-EM structure of the GLP-1-bound human GLP-1R-Gi complex
Method: single particle / : Zhou QT

PDB-9x20:
Cryo-EM structure of the GLP-1-bound human GLP-1R-Gi complex
Method: single particle / : Zhou QT, Zhou QT

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more