[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 662 items for (author: tian & hl)

EMDB-68747:
Structure of CXCR4 in complex with a de-novo designed mini-protein antagonist
Method: single particle / : Banerjee R, Ganguly M, Banerjee N, Tiwari D, Muratspahic E, Baker D, Shukla AK

PDB-22xc:
Structure of CXCR4 in complex with a de-novo designed mini-protein antagonist
Method: single particle / : Banerjee R, Ganguly M, Banerjee N, Tiwari D, Muratspahic E, Baker D, Shukla AK

EMDB-72977:
Octopus sensory receptor CRT1 bound to Progesterone
Method: single particle / : Jiang H, Hibbs RE

PDB-9yi4:
Octopus sensory receptor CRT1 bound to Progesterone
Method: single particle / : Jiang H, Hibbs RE

EMDB-63614:
Structure-based discovery of potent agonists of the orphan receptor GPR139
Method: single particle / : Cabezadevaca I, Trapkov B, Shen L, Pezeshki M, Zhang XH, Liu Z, Hauser AS, Carlsson J

PDB-9m42:
Structure-based discovery of potent agonists of the orphan receptor GPR139
Method: single particle / : Cabezadevaca I, Trapkov B, Shen L, Pezeshki M, Zhang XH, Liu Zj, Hauser AS, Carlsson J

EMDB-71123:
CD73-Sym024 focused map 1
Method: single particle / : Armbruster E, Bansia H, Des Georges A

EMDB-71125:
CD73-Sym024 consensus map
Method: single particle / : Armbruster E, Bansia H, Des Georges A

EMDB-71126:
CD73_Sym024 focused map 2
Method: single particle / : Armbruster E, Bansia H, Des Georges A

EMDB-71127:
CD73-Sym024 focused map 3
Method: single particle / : Armbruster E, Bansia H, Des Georges A

EMDB-71128:
Cryo-EM structure of CD73 in complex with antibody Sym024
Method: single particle / : Armbruster E, Bansia H, Des Georges A

PDB-9p1m:
Cryo-EM structure of CD73 in complex with antibody Sym024
Method: single particle / : Bansia H, Armbruster E, Des Georges A

EMDB-54480:
Tomogram of unbudded yeast cell overexpressing Ldm1
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54483:
Tomogram of yeast cell overexpressing Ldm1, treated with alpha-factor
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54486:
Tomogram of yeast cell overexpressing Ldm1, treated with alpha-factor (unbudded region)
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54487:
Tomogram of yeast cell overexpressing Ldm1, treated with alpha-factor(bud region)
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54489:
Tomogram of a yeast cell treated with alpha-factor (bud region)
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54497:
Tomogram of a yeast cell treated with alpha-factor (bud region)
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-72192:
Structure of neurodevelopmental mutant AGO1 F180del in complex with guide RNA
Method: single particle / : Savidge A, Adhav V, Shen Z, Fu T, Nakanishi K

PDB-9q3f:
Structure of neurodevelopmental mutant AGO1 F180del in complex with guide RNA
Method: single particle / : Savidge A, Adhav V, Shen Z, Fu T, Nakanishi K

EMDB-72193:
Cryo-EM structure of human AGO1 in complex with guide RNA
Method: single particle / : Savidge A, Adhav V, Shen Z, Fu T, Nakanishi K

PDB-9q3g:
Cryo-EM structure of human AGO1 in complex with guide RNA
Method: single particle / : Savidge A, Adhav V, Shen Z, Fu T, Nakanishi K

EMDB-51034:
Cryo-EM reconstruction of the full-length E. coli transmembrane formate transporter FocA
Method: single particle / : Tueting C, Janson K, Kyrilis FL, Hamdi F, Kastritis PL

EMDB-51035:
Cryo-EM reconstruction of the full-length H209N mutant E. coli transmembrane formate transporter FocA
Method: single particle / : Tueting C, Janson K, Kyrilis FL, Hamdi F, Kastritis PL

EMDB-52595:
Asymmetric cryo-EM reconstruction of the full-length E. coli transmembrane formate transporter FocA
Method: single particle / : Tueting C, Janson K, Kyrilis FL, Hamdi F, Kastritis PL

PDB-9g49:
Cryo-EM reconstruction of the full-length E. coli transmembrane formate transporter FocA
Method: single particle / : Tueting C, Janson K, Kyrilis FL, Hamdi F, Kastritis PL

PDB-9g4d:
Cryo-EM reconstruction of the full-length H209N mutant E. coli transmembrane formate transporter FocA
Method: single particle / : Tueting C, Janson K, Kyrilis FL, Hamdi F, Kastritis PL

PDB-9i3k:
Asymmetric cryo-EM reconstruction of the full-length E. coli transmembrane formate transporter FocA
Method: single particle / : Tueting C, Janson K, Kyrilis FL, Hamdi F, Kastritis PL

EMDB-49201:
Cryo-EM structure of 110_C4 Fab in complex with CIDRa1.7 PfEMP1
Method: single particle / : Raghavan SSR, Ward AB

PDB-9naq:
Cryo-EM structure of 110_C4 Fab in complex with CIDRa1.7 PfEMP1
Method: single particle / : Raghavan SSR, Ward AB

EMDB-18671:
Cryo-EM structure of human islet amyloid polypeptide (hIAPP) mutant S29P, polymorph 1
Method: helical / : Ooi SA, Valli D, Maj M

PDB-8qvp:
Cryo-EM structure of human islet amyloid polypeptide (hIAPP) mutant S29P, polymorph 1
Method: helical / : Ooi SA, Valli D, Maj M

EMDB-51295:
Recombinant Myeloperoxidase bound to nucleosome core particle
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-51296:
Nucleosome core particle
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-51297:
Native monomeric Myeloperoxidase bound to nucleosome core particle
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-51298:
Native dimeric Myeloperoxidase bound to nucleosome core particle; nucleosome focused map
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-51299:
Native dimeric Myeloperoxidase bound to nucleosome core particle; MPO focused map
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-51300:
Native dimeric Myeloperoxidase bound to nucleosome core particle; consensus map
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-51301:
Native dimeric Myeloperoxidase bound to nucleosome core particle; composite map
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-51302:
Native dimeric Myeloperoxidase bound to nucleosome core particle, intermediate state, nucleosome focused map
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-51303:
Native dimeric Myeloperoxidase bound to nucleosome core particle, intermediate state, map focused on MPO
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-51304:
Native dimeric Myeloperoxidase bound to nucleosome core particle, intermediate state, consensus map
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-51305:
Native dimeric Myeloperoxidase bound to nucleosome core particle, intermediate state; composite map
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-51306:
Native monomeric Myeloperoxidase bound to nucleosome core particle, late time point
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-52865:
Nucleosome core particle bound by one molecule of DTT-reduced native monomeric myeloperoxidase
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-52866:
Nucleosome core particle bound by two molecules of DTT-reduced native monomeric myeloperoxidase
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-52867:
Nucleosome core particle bound by one monomer and one dimer of of DTT-reduced native myeloperoxidase; map focused on nucleosome/MPO monomer
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-52868:
Nucleosome core particle bound by one monomer and one dimer of of DTT-reduced native myeloperoxidase; map focused on MPO dimer
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-52869:
Nucleosome core particle bound by one monomer and one dimer of of DTT-reduced native myeloperoxidase; consensus map
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

EMDB-52870:
Nucleosome core particle bound by one monomer and one dimer of of DTT-reduced native myeloperoxidase
Method: single particle / : Raisch T, Burn GL, Tacke S, Winkler M, Prumbaum D, Thee S, Zychlinsky A, Raunser S

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more