[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 26 items for (author: tatli & m)

EMDB-53097:
Structure of the GH13 domain of Ruminococcus bromii Amy4
Method: single particle / : Wimmer BH, Medalia O

EMDB-53101:
Structure of the GH13 and MucBP domains of Ruminococcus bromii Amy10
Method: single particle / : Wimmer BH, Medalia O

EMDB-53102:
Structure of the GH13 domain of Ruminococcus bromii Amy16
Method: single particle / : Wimmer BH, Medalia O

EMDB-53103:
Structure of the GH13 and MucBP domains of Ruminococcus bromii Amy12
Method: single particle / : Wimmer BH, Medalia O

EMDB-53104:
Ruminococcus bromii ribosome
Method: subtomogram averaging / : Wimmer BH, Medalia O

PDB-9qf3:
Structure of the GH13 domain of Ruminococcus bromii Amy4
Method: single particle / : Wimmer BH, Medalia O

PDB-9qf8:
Structure of the GH13 and MucBP domains of Ruminococcus bromii Amy10
Method: single particle / : Wimmer BH, Medalia O

PDB-9qf9:
Structure of the GH13 domain of Ruminococcus bromii Amy16
Method: single particle / : Wimmer BH, Medalia O

PDB-9qfa:
Structure of the GH13 and MucBP domains of Ruminococcus bromii Amy12
Method: single particle / : Wimmer BH, Medalia O

EMDB-50623:
carvedilol-B1AR-arrestin2-V2Rpp complex
Method: single particle / : Tatli M, Abiko LA, Petrovic I, Stahlberg H, Grzesiek S

PDB-9ewv:
mouse alpha-synuclein
Method: helical / : Tatli M, Stahlberg H

EMDB-42294:
Structure of recombinantly assembled murine alpha-synuclein fibrils
Method: helical / : Zhou Y, Sokratian A

PDB-8uie:
Structure of recombinantly assembled murine alpha-synuclein fibrils
Method: helical / : Zhou Y, Sokratian A

PDB-8r3t:
Cofactor-free Tau 4R2N isoform
Method: helical / : Limorenko G, Tatli M, Kolla R, Nazarov S, Weil MT, Schondorf DC, Geist D, Reinhardt P, Ehrnhoefer DE, Stahlberg H, Gasparini L, Lashuel HA

EMDB-13061:
Tomogram of nuclear envelope of MEF cell carrying homozygous H222P mutation in Lmna.
Method: electron tomography / : Kronenberg-Tenga R

EMDB-11986:
Cryo-EM structure of exoglucanase Cel48S
Method: single particle / : Tatli M, Morais S, Tovar-Herrera OE, Bomble YJ, Bayer EA, Medalia O, Mizrahi I

EMDB-12811:
Segment of the cytoplasmic ring of the human nuclear pore complex
Method: subtomogram averaging / : Schuller AP, Wojtynek M, Schwartz TU, Medalia O, Weis K

EMDB-12812:
Segment of the inner ring of the human nuclear pore complex
Method: subtomogram averaging / : Schuller AP, Wojtynek M, Schwartz TU, Medalia O, Weis K

EMDB-12813:
Segment of the nucleoplasmic ring of the human nuclear pore complex
Method: subtomogram averaging / : Schuller AP, Wojtynek M, Schwartz TU, Medalia O, Weis K

EMDB-12814:
In-cell human nuclear pore complex
Method: subtomogram averaging / : Schuller AP, Wojtynek M, Schwartz TU, Medalia O, Weis K

PDB-7peq:
Model of the outer rings of the human nuclear pore complex
Method: subtomogram averaging / : Schuller AP, Wojtynek M, Mankus D, Tatli M, Kronenberg-Tenga R, Regmi SG, Dasso M, Weis K, Medalia O, Schwartz TU

PDB-7per:
Model of the inner ring of the human nuclear pore complex
Method: subtomogram averaging / : Schuller AP, Wojtynek M, Mankus D, Tatli M, Kronenberg-Tenga R, Regmi SG, Dasso M, Weis K, Medalia O, Schwartz TU

EMDB-13056:
Tomogram of a nuclease treated shVim HO H222P MEF nuclear lamina
Method: electron tomography / : Tatli M, Medalia O

EMDB-11976:
Actin filament structure from focal adhesions of mouse embryonic fibroblasts
Method: subtomogram averaging / : Martins B, Medalia O, Eibauer M

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more