[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 79 items for (author: syed & za)

EMDB-70624:
Cryo-EM structure of an octameric RAD51-XRCC3-RAD51C (RAD51-X3C) complex
Method: single particle / : Jia L, Ruben EA, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

EMDB-70625:
Cryo-EM structure of a pentameric RAD51-XRCC3-RAD51C-RAD51D-XRCC2 (51-X3CDX2) complex.
Method: single particle / : Ruben EA, Jia L, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

EMDB-70627:
Cryo-EM structure of a tetrameric XRCC3-RAD51C-RAD51D-XRCC2 complex
Method: single particle / : Ruben EA, Jia L, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

EMDB-75014:
Cryo-EM Structure of a RAD51 filament bound by ssDNA and the XRCC3-RAD51C-RAD51D-XRCC2 paralog complex
Method: single particle / : Ruben EA, Jia L, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

PDB-9omy:
Cryo-EM structure of an octameric RAD51-XRCC3-RAD51C (RAD51-X3C) complex
Method: single particle / : Jia L, Ruben EA, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

PDB-9omz:
Cryo-EM structure of a pentameric RAD51-XRCC3-RAD51C-RAD51D-XRCC2 (51-X3CDX2) complex.
Method: single particle / : Ruben EA, Jia L, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

PDB-9on2:
Cryo-EM structure of a tetrameric XRCC3-RAD51C-RAD51D-XRCC2 complex
Method: single particle / : Ruben EA, Jia L, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

PDB-9zzr:
Cryo-EM Structure of a RAD51 filament bound by ssDNA and the XRCC3-RAD51C-RAD51D-XRCC2 paralog complex
Method: single particle / : Ruben EA, Jia L, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

EMDB-50730:
Human RNA Polymerase III Class III Open Pre-initiation Complex 1 (OC1)
Method: single particle / : Shah SZ, Ramsay EP, Cecatiello V, Perry TN, Vannini A

EMDB-50731:
RNA Polymerase III Class III Open Pre-initation Complex 2 (OC2)
Method: single particle / : Shah SZ, Ramsay EP, Cecatiello V, Perry TN, Vannini A

EMDB-50732:
RNA Polymerase III Class III Melting Pre-Initiation Complex (MC)
Method: single particle / : Shah SZ, Ramsay EP, Cecatiello V, Perry TN, Vannini A

EMDB-50733:
RNA Polymerase III Class III Open Mini Pre-initiation Complex 1 (OC1-mini)
Method: single particle / : Shah SZ, Ramsay EP, Cecatiello V, Perry TN, Vannini A

EMDB-50734:
RNA Polymerase III Class III Open Mini Pre-Initiation complex 2 (OC2-mini)
Method: single particle / : Shah SZ, Ramsay EP, Cecatiello V, Perry TN, Vannini A

PDB-9fso:
Human RNA Polymerase III Class III Open Pre-initiation Complex 1 (OC1)
Method: single particle / : Shah SZ, Ramsay EP, Cecatiello V, Perry TN, Vannini A

PDB-9fsp:
RNA Polymerase III Class III Open Pre-initation Complex 2 (OC2)
Method: single particle / : Shah SZ, Ramsay EP, Cecatiello V, Perry TN, Vannini A

PDB-9fsq:
RNA Polymerase III Class III Melting Pre-Initiation Complex (MC)
Method: single particle / : Shah SZ, Ramsay EP, Cecatiello V, Perry TN, Vannini A

PDB-9fsr:
RNA Polymerase III Class III Open Mini Pre-initiation Complex 1 (OC1-mini)
Method: single particle / : Shah SZ, Ramsay EP, Cecatiello V, Perry TN, Vannini A

PDB-9fss:
RNA Polymerase III Class III Open Mini Pre-Initiation complex 2 (OC2-mini)
Method: single particle / : Shah SZ, Ramsay EP, Cecatiello V, Perry TN, Vannini A

EMDB-41854:
Structure of Human Mitochondrial Chaperonin V72I Mutant
Method: single particle / : Chen L, Wang J

PDB-8u39:
Structure of Human Mitochondrial Chaperonin V72I mutant
Method: single particle / : Chen L, Wang J

EMDB-29907:
Structure of human NDS.1 Fab and 1G01 Fab in complex with influenza virus neuraminidase from A/Indiana/10/2011 (H3N2v); consensus map with only Fab 1G01 resolved
Method: single particle / : Tsybovsky Y, Lederhofer J, Kwong PD, Kanekiyo M

EMDB-29908:
Structure of human NDS.1 Fab and 1G01 Fab in complex with influenza virus neuraminidase from A/Indiana/10/2011 (H3N2v), locally refined map
Method: single particle / : Tsybovsky Y, Lederhofer J, Kwong PD, Kanekiyo M

EMDB-29909:
Structure of human NDS.3 Fab in complex with influenza virus neuraminidase from A/Darwin/09/2021 (H3N2)
Method: single particle / : Tsybovsky Y, Lederhofer J, Kwong PD, Kanekiyo M

PDB-8gat:
Structure of human NDS.1 Fab and 1G01 Fab in complex with influenza virus neuraminidase from A/Indiana/10/2011 (H3N2v), based on consensus cryo-EM map with only Fab 1G01 resolved
Method: single particle / : Tsybovsky Y, Lederhofer J, Kwong PD, Kanekiyo M

PDB-8gau:
Structure of human NDS.1 Fab and 1G01 Fab in complex with influenza virus neuraminidase from A/Indiana/10/2011 (H3N2v)
Method: single particle / : Tsybovsky Y, Lederhofer J, Kwong PD, Kanekiyo M

PDB-8gav:
Structure of human NDS.3 Fab in complex with influenza virus neuraminidase from A/Darwin/09/2021 (H3N2)
Method: single particle / : Tsybovsky Y, Lederhofer J, Kwong PD, Kanekiyo M

EMDB-42481:
I53_dn5 nanoparticle displaying the trimeric HA heads with heptad domain, TH-1heptad-I53_dn5
Method: single particle / : Park YJ, Veesler D

EMDB-42482:
I53_dn5 nanoparticle displaying the trimeric HA heads with heptad domain, TH-1heptad-I53_dn5 (local refinement of TH-1heptad)
Method: single particle / : Park YJ, Veesler D

EMDB-42483:
I53_dn5 nanoparticle displaying the trimeric HA heads with heptad domain, TH-2heptad-I53_dn5
Method: single particle / : Park YJ, Veesler D

EMDB-42485:
I53_dn5 nanoparticle displaying the trimeric HA heads with heptad domain, TH-6heptad-I53_dn5
Method: single particle / : Park YJ, Veesler D

EMDB-42486:
I53_dn5 nanoparticle displaying the trimeric HA heads with heptad domain, TH-6heptad-I53_dn5 (local refinement of TH-6heptad)
Method: single particle / : Park YJ, Veesler D

PDB-8ur5:
I53_dn5 nanoparticle displaying the trimeric HA heads with heptad domain, TH-1heptad-I53_dn5 (local refinement of TH-1heptad)
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8ur7:
I53_dn5 nanoparticle displaying the trimeric HA heads with heptad domain, TH-6heptad-I53_dn5 (local refinement of TH-6heptad)
Method: single particle / : Park YJ, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-40787:
Negative stain EM map 1 of polyclonal serum from rabbit immunized with Trihead-Mosaic-I53_dn5 in complex with MI15 HA-foldon
Method: single particle / : Dosey A, King NP

EMDB-40788:
Negative stain EM map 2 of polyclonal serum from rabbit immunized with Trihead-Mosaic-I53_dn5 in complex with MI15 HA-foldon
Method: single particle / : Dosey A, King NP

EMDB-40792:
Negative stain EM map 3 of polyclonal serum from rabbit immunized with Trihead-Mosaic-I53_dn5 in complex with MI15 HA-foldon
Method: single particle / : Dosey A, King NP

EMDB-40793:
Negative stain EM map 4 of polyclonal serum from rabbit immunized with Trihead-Mosaic-I53_dn5 in complex with MI15 HA-foldon
Method: single particle / : Dosey A, King NP

EMDB-40794:
Negative stain EM map 5 of polyclonal serum from rabbit immunized with Trihead-Mosaic-I53_dn5 in complex with MI15 HA-foldon
Method: single particle / : Dosey A, King NP

EMDB-40795:
Negative stain EM map 6 of polyclonal serum from rabbit immunized with Trihead-Mosaic-I53_dn5 in complex with MI15 HA-foldon
Method: single particle / : Dosey A, King NP

EMDB-40798:
Negative stain EM map 1 of polyclonal serum from rabbit immunized with Trihead-Hyperglycosylated-Mosaic-I53_dn5 in complex with MI15 HA-foldon
Method: single particle / : Dosey A, King NP

EMDB-40800:
Negative stain EM map 2 of polyclonal serum from rabbit immunized with Trihead-Hyperglycosylated-Mosaic-I53_dn5 in complex with MI15 HA-foldon
Method: single particle / : Dosey A, King NP

EMDB-40801:
Negative stain EM map 3 of polyclonal serum from rabbit immunized with Trihead-Hyperglycosylated-Mosaic-I53_dn5 in complex with MI15 HA-foldon
Method: single particle / : Dosey A, King NP

EMDB-40802:
Negative stain EM map 4 of polyclonal serum from rabbit immunized with Trihead-Hyperglycosylated-Mosaic-I53_dn5 in complex with MI15 HA-foldon
Method: single particle / : Dosey A, King NP

EMDB-40831:
Negative stain EM map 5 of polyclonal serum from rabbit immunized with Trihead-Hyperglycosylated-Mosaic-I53_dn5 in complex with MI15 HA-foldon
Method: single particle / : Dosey A, King NP

EMDB-40832:
Negative stain EM map 6 of polyclonal serum from rabbit immunized with Trihead-Hyperglycosylated-Mosaic-I53_dn5 in complex with MI15 HA-foldon
Method: single particle / : Dosey A, King NP

EMDB-40833:
Negative stain EM map 1 of polyclonal serum from rabbit immunized with Trihead-Hypervariable-Mosaic-I53_dn5 in complex with MI15 HA-foldon
Method: single particle / : Dosey A, King NP

EMDB-40834:
Negative stain EM map 2 of polyclonal serum from rabbit immunized with Trihead-Hypervariable-Mosaic-I53_dn5 in complex with MI15 HA-foldon
Method: single particle / : Dosey A, King NP

EMDB-40835:
Negative stain EM map 3 of polyclonal serum from rabbit immunized with Trihead-Hypervariable-Mosaic-I53_dn5 in complex with MI15 HA-foldon
Method: single particle / : Dosey A, King NP

EMDB-40836:
Negative stain EM map 4 of polyclonal serum from rabbit immunized with Trihead-Hypervariable-Mosaic-I53_dn5 in complex with MI15 HA-foldon
Method: single particle / : Dosey A, King NP

EMDB-40837:
Negative stain EM map 5 of polyclonal serum from rabbit immunized with Trihead-Hypervariable-Mosaic-I53_dn5 in complex with MI15 HA-foldon
Method: single particle / : Dosey A, King NP

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more