[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 4,208 items for (author: sun & p)

EMDB-54112:
CryoEM structure of the microtubule-AKAP13 C1 domain complex
Method: single particle / : Giono M, Choi SR, Filipcik P, Steinmetz MO

EMDB-72178:
Cereblon Ternary Complex with Blimp1 and compound 5
Method: single particle / : Watson ER, Lander GC

PDB-9q33:
Cereblon Ternary Complex with Blimp1 and compound 5
Method: single particle / : Watson ER

EMDB-52395:
Transcription-arrested double-layered particle of bacteriophage phi6 reconstructed with icosahedral symmetry
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52396:
Transcription-arrested single-layered particle of bacteriophage phi6 reconstructed with icosahedral symmetry
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52379:
Transcribing double-layered particle of bacteriophage phi6 reconstructed with icosahedral symmetry
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52380:
Transcribing single-layered particle of bacteriophage phi6 reconstructed with icosahedral symmetry
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52381:
Localized reconstruction of packaging hexamer P4 from polar region of transcribing single-layered particle of bacteriophage phi6
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52382:
Localized reconstruction of packaging hexamer P4 from equatorial region of transcribing single-layered particle of bacteriophage phi6
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52383:
Localized reconstruction of packaging hexamer P4 from polar region of transcribing double-layered particle of bacteriophage phi6
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52384:
Localized reconstruction of packaging hexamer P4 from equatorial region of transcribing double-layered particle of bacteriophage phi6
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52385:
Localized reconstruction consensus map of minor protein P7 from transcribing particles of bacteriophage phi6
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52386:
Localized reconstruction of polymerase P2 from transcribing double-layered particle of bacteriophage phi6 in stage A1
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52387:
Localized reconstruction of polymerase P2 from transcribing double-layered particle of bacteriophage phi6 in stage A2
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52388:
Localized reconstruction of polymerase P2 from transcribing double-layered particle of bacteriophage phi6 in stage A3
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52389:
Localized reconstruction of polymerase P2 from transcribing single-layered particle of bacteriophage phi6 in stage B
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52390:
Localized reconstruction of polymerase P2 from transcribing single-layered particle of bacteriophage phi6 in stage C
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52391:
Asymmetric reconstruction of transcribing double-layered particle of bacteriophage phi6, disassembly intermediate 1
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52392:
Asymmetric reconstruction of transcribing double-layered particle of bacteriophage phi6, disassembly intermediate 2
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52393:
Asymmetric reconstruction of transcribing double-layered particle of bacteriophage phi6, disassembly intermediate 3
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52394:
Asymmetric reconstruction of transcribing double-layered particle of bacteriophage phi6, disassembly intermediate 4
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52397:
Transcription-arrested double-layered particle of bacteriophage phi6 reconstructed with D3 symmetry
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52398:
Transcription-arrested single-layered particle of bacteriophage phi6 reconstructed with D3 symmetry
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52399:
Localized reconstruction of asymmetric unit from transcribing double-layered particle of bacteriophage phi6
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52400:
Localized reconstruction of asymmetric unit from transcribing single-layered particle of bacteriophage phi6
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-52401:
Localized reconstruction of asymmetric unit from transcribing single-layered particle of bacteriophage phi6 in an over-expanded state
Method: single particle / : Ilca SL, Huiskonen JT

EMDB-55729:
in situ nucleosome,closed state
Method: subtomogram averaging / : Xu P, Wang Y, Sun YJ

EMDB-55730:
in situ nucleosome, open state
Method: subtomogram averaging / : Xu P, Wang Y, Sun YJ

EMDB-49912:
Cryo-EM structure of SARS-CoV-2 spike S2' trimer
Method: single particle / : Shi W, Jonaid G, Chen B

EMDB-49917:
Cryo-EM structure of SARS-CoV-2 spike S2' trimer (local map 1)
Method: single particle / : Shi W, Jonaid G, Chen B

EMDB-49918:
Cryo-EM structure of SARS-CoV-2 spike S2' trimer (local map 2)
Method: single particle / : Shi W, Jonaid G, Chen B

EMDB-49921:
Cryo-EM structure of SARS-CoV-2 spike S2' trimer (dimer of trimer)
Method: single particle / : Shi W, Jonaid G, Chen B

PDB-9nxy:
Cryo-EM structure of SARS-CoV-2 spike S2' trimer
Method: single particle / : Shi W, Jonaid G, Chen B

EMDB-63452:
Cryo-EM structure of the cytosolic ARMH2-EFCAB9-CATSPERz subcomplex of the mouse CatSpermasome
Method: single particle / : Zhao Q, Lin S, Xu Q, Wu J

PDB-9lwo:
Cryo-EM structure of the cytosolic ARMH2-EFCAB9-CATSPERz subcomplex of the mouse CatSpermasome
Method: single particle / : Zhao Q, Lin S, Xu Q, Wu J

EMDB-64077:
Cryo-EM structure of SARS-CoV-2 KP.2 spike RBD in complex with ACE2
Method: single particle / : Jin XH, Sun L

EMDB-64078:
Cryo-EM structure of SARS-CoV-2 KP.2 spike in complex with ACE2
Method: single particle / : Jin XH, Sun L

PDB-9ue6:
Cryo-EM structure of SARS-CoV-2 KP.2 spike RBD in complex with ACE2
Method: single particle / : Jin XH, Sun L

PDB-9ue7:
Cryo-EM structure of SARS-CoV-2 KP.2 spike in complex with ACE2
Method: single particle / : Jin XH, Sun L

EMDB-70318:
PV2-10D2 Complex
Method: single particle / : Waddey BT, Hafenstein SL

EMDB-70320:
SIPV3-2E1 Complex
Method: single particle / : Waddey BT, Hafenstein SL

EMDB-70339:
SIPV3-6B5 Complex
Method: single particle / : Waddey BT, Hafenstein SL

EMDB-70392:
SIPV1-5E12 Complex
Method: single particle / : Waddey BT, Hafenstein SL

PDB-9ocl:
PV2-10D2 Complex
Method: single particle / : Waddey BT, Hafenstein SL

PDB-9oco:
SIPV3-2E1 Complex
Method: single particle / : Waddey BT, Hafenstein SL

PDB-9od3:
SIPV3-6B5 Complex
Method: single particle / : Waddey BT, Hafenstein SL

PDB-9oea:
SIPV1-5E12 Complex
Method: single particle / : Waddey BT, Hafenstein SL

EMDB-48812:
Cryo-EM structure of rabbit TRPM3 in apo resting state at 37 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-48813:
Cryo-EM structure of rabbit TRPM3 in complex with CIM0216 in resting state at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

EMDB-48814:
Cryo-EM structure of rabbit TRPM3 in apo activated state at 18 degrees Celsius
Method: single particle / : Kumar S, Lu W, Du J

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more