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Showing all 44 items for (author: sidhu & s)

EMDB-54793:
Structure of Neddylated CUL5 C-terminal region-RBX2-ARIH2~L3A2-1~Ub
Method: single particle / : Schulman BA, Du J

EMDB-54794:
Structure of RBR E2 variant binding to CUL5-RBX2 bound ARIH2
Method: single particle / : Schulman BA, Du J

EMDB-54795:
Cryo-EM map of focus refined ASB9-Elob/C-CKB bound to Nedd8-CUL5-RBX2-ARIH2-L3A2-1
Method: single particle / : Schulman BA, Du J

EMDB-54892:
consensus map of Neddylated CUL5-ARIH2-L3A2-1 bound to ASB9-EloB/C-CKB
Method: single particle / : Schulman BA, Du J

EMDB-54893:
Focus refined map of Neddylated CUL5-ARIH2-L3A2-1 bound to ASB9-EloB/C-CKB, focus refined on ARIH2-L3A2-1
Method: single particle / : Schulman BA, Du J

EMDB-54933:
Consensus Map of Neddylated CUL5 C-terminal region-RBX2-ARIH2~L3A2-1~Ub
Method: single particle / : Schulman BA, Du J

EMDB-54934:
Focus refined map of Neddylated CUL5 C-terminal region-RBX2-ARIH2~L3A2-1~Ub
Method: single particle / : Schulman BA, Du J

PDB-9sdx:
Structure of RBR binding E2 variant crosslinked with NEDD8-CUL5-RBX2 bound ARIH2 and Ub
Method: single particle / : Schulman BA, Du J

PDB-9sdy:
Structure of RBR E2 variant binding to CUL5-RBX2 bound ARIH2
Method: single particle / : Schulman BA, Du J

EMDB-16242:
Cryo-EM structure of RANBP10-CTLH SR4 complex
Method: single particle / : Sherpa D, Chrustowicz J

EMDB-16243:
Cryo-EM map of ARMC8-specific nanobody bound to CTLH-SR4
Method: single particle / : Chrustowicz J, Sherpa D

EMDB-14454:
70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain
Method: single particle / : Mitropoulou A, Plessa E, Wlodarski T, Ahn M, Sidhu H, Becker TA, Beckmann R, Cabrita LD, Christodoulou J, Cassaignau AME

EMDB-14846:
70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia
Method: single particle / : Mitropoulou A, Plessa E, Wlodarski T, Ahn M, Sidhu H, Becker TA, Beckmann R, Cabrita LD, Christodoulou J

EMDB-14850:
70S E. coli ribosome with a stalled filamin domain 5 nascent chain
Method: single particle / : Mitropoulou A, Plessa E, Wlodarski T, Ahn M, Chan SHS, Becker TA, Beckmann R, Cabrita LD, Christodoulou J

EMDB-14864:
70S E. coli ribosome with truncated uL23 and uL24 loops
Method: single particle / : Mitropoulou A, Wlodarski T, Ahn M, Becker TA, Beckmann R, Cabrita LD, Christodoulou J

EMDB-14865:
70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain
Method: single particle / : Mitropoulou A, Wlodarski T, Ahn M, Becker TA, Beckmann R, Cabrita LD, Christodoulou J

PDB-7z20:
70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chain
Method: single particle / : Mitropoulou A, Plessa E, Wlodarski T, Ahn M, Sidhu H, Becker TA, Beckmann R, Cabrita LD, Christodoulou J

PDB-7zod:
70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia
Method: single particle / : Mitropoulou A, Plessa E, Wlodarski T, Ahn M, Sidhu H, Becker TA, Beckmann R, Cabrita LD, Christodoulou J

PDB-7zp8:
70S E. coli ribosome with a stalled filamin domain 5 nascent chain
Method: single particle / : Mitropoulou A, Plessa E, Wlodarski T, Ahn M, Chan SHS, Becker TA, Beckmann R, Cabrita LD, Christodoulou J

PDB-7zq5:
70S E. coli ribosome with truncated uL23 and uL24 loops
Method: single particle / : Mitropoulou A, Wlodarski T, Ahn M, Becker TA, Beckmann R, Cabrita LD, Christodoulou J

PDB-7zq6:
70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain
Method: single particle / : Mitropoulou A, Wlodarski T, Ahn M, Becker TA, Beckmann R, Cabrita LD, Christodoulou J

EMDB-22925:
cryo-EM structure of SARS-CoV-2 spike in complex with Fab 15033-7, two RBDs bound
Method: single particle / : Li Z, Rini JM

EMDB-22926:
cryo-EM structure of SARS-CoV-2 spike in complex with Fab 15033-7, three RBDs bound
Method: single particle / : Li Z, Rini JM

PDB-7kmk:
cryo-EM structure of SARS-CoV-2 spike in complex with Fab 15033-7, two RBDs bound
Method: single particle / : Li Z, Rini JM

PDB-7kml:
cryo-EM structure of SARS-CoV-2 spike in complex with Fab 15033-7, three RBDs bound
Method: single particle / : Li Z, Rini JM

EMDB-23064:
SARS-CoV-2 spike protein in complex with Fab 15033-7, 3-"up", asymmetric
Method: single particle / : Li Z, Rini J

EMDB-23065:
SARS-CoV-2 spike protein in complex with Fab 15033-7, 2-"up"-1-"down" conformation
Method: single particle / : Li Z, Rini J

PDB-7kxj:
SARS-CoV-2 spike protein in complex with Fab 15033-7, 3-"up", asymmetric
Method: single particle / : Li Z, Rini J

PDB-7kxk:
SARS-CoV-2 spike protein in complex with Fab 15033-7, 2-"up"-1-"down" conformation
Method: single particle / : Li Z, Rini J

EMDB-10072:
cryo EM map of human APC/CCDH1 bound to the avid UbVW_dim trap
Method: single particle / : Watson ER, Prabu JR, Schulman BA

PDB-5l9t:
Model of human Anaphase-promoting complex/Cyclosome (APC/C-CDH1) with E2 UBE2S poised for polyubiquitination where UBE2S, APC2, and APC11 are modeled into low resolution density
Method: single particle / : Brown NG, VanderLinden R, Dube P, Haselbach D, Peters JM, Stark H, Schulman BA

PDB-5l9u:
Model of human Anaphase-promoting complex/Cyclosome (APC/C-CDH1) with a cross linked Ubiquitin variant-substrate-UBE2C (UBCH10) complex representing key features of multiubiquitination
Method: single particle / : Brown NG, VanderLinden R, Dube P, Haselbach D, Peters JM, Stark H, Schulman BA

PDB-5khu:
Model of human Anaphase-promoting complex/Cyclosome (APC15 deletion mutant), in complex with the Mitotic checkpoint complex (APC/C-CDC20-MCC) based on cryo EM data at 4.8 Angstrom resolution
Method: single particle / : Yamaguchi M, VanderLinden R, Dube P, Stark H, Schulman B

PDB-5khr:
Model of human Anaphase-promoting complex/Cyclosome complex (APC15 deletion mutant) in complex with the E2 UBE2C/UBCH10 poised for ubiquitin ligation to substrate (APC/C-CDC20-substrate-UBE2C)
Method: single particle / : VanderLinden R, Yamaguchi M, Dube P, Haselbach D, Stark H, Schulman BA

EMDB-4021:
Human Anaphase-Promoting Complex/Cyclosome (APC/C) APC15 deletion mutant with Mitotic Checkpoint Complex (MCC) in a closed conformation.
Method: single particle / : Stark H, Schulman B, Peters JM

EMDB-4022:
Human Anaphase-Promoting Complex/Cyclosome (APC/C) APC15 deletion mutant with Mitotic Checkpoint Complex (MCC) in an open conformation.
Method: single particle / : Stark H, Schulman BA, Peters JM

EMDB-4023:
Human Anaphase-Promoting Complex/Cyclosome bound to Mitotic Checkpoint Complex (APC/C-MCC) in a closed conformation.
Method: single particle / : Stark H, Schulman BA, Peters JM

EMDB-4024:
Human Anaphase-promoting complex/Cyclosome bound to Mitotic Checkpoint Complex(APC/C-MCC) in an open conformation.
Method: single particle / : Stark H, Schulman BA, Peters JM

EMDB-4025:
Human Anaphase-promoting complex/Cyclosome (APC/C) APC15 deletion mutant bound to the E2 UBE2C (aka UBCH10) poised for ubiquitin ligation to substrate.
Method: single particle / : Stark H, Schulman BA, Peters JM

EMDB-4026:
Human Anaphase-Promoting Complex/Cyclosome (APC/C) APC15 deletion mutant bound to Mitotic Checkpoint Complex (MCC) and the E2 UBE2S poised for UB chain synthesis.
Method: single particle / : Stark H, Schulman BA, Peters JM

EMDB-4027:
Human Anaphase-Promoting Complex/Cyclosome bound to Mitotic Checkpoint Complex (APC/C-MCC) and the E2 UBE2C (aka UBCH10) poised for ubiquitination of MCC's CDC20
Method: single particle / : Stark H, Schulman BA, Peters JM

EMDB-4028:
Human Anaphase-Promoting Complex/Cyclosome (APC/C) APC15 deletion mutant bound to Mitotic Checkpoint Complex (MCC) and the E2 UBE2C (aka UBCH10) poised for ubiquitination of MCC's CDC20
Method: single particle / : Stark H, Schulman BA, Peters JM

EMDB-3432:
Anaphase-promoting complex/Cyclosome (APC/C)-CDH1-UBE2C (aka UBCH10)-substrate-Ubiquitin (variant)
Method: single particle / : Brown N, VanderLinden R, Watson E, Weissmann F, Ordureau A, Wu KP, Yu S, Mercedi P, Harrison J, Davidson I, Coudevylle R, Lu Y, Dube P, Brunner M, Grace CRR, Miller D, Haselbach D, Jarvis M, Yamaguchi M, Yanishevski D, Petzold G, Sidhu S, Kuhlman B, Kirschner M, Harper JW, Peters JM, Stark H, Schulman BA

EMDB-3433:
Anaphase-promoting complex/Cyclosome (APC/C)-CDH1-UBE2S-Ubiquitin (variant)-substrate
Method: single particle / : Brown N, VanderLinden R, Watson E, Weissmann F, Ordureau A, Wu KP, Yu S, Mercedi P, Harrison J, Davidson I, Coudevylle R, Lu Y, Dube P, Brunner M, Grace CRR, Miller D, Haselbach D, Jarvis M, Yamaguchi M, Yanishevski D, Petzold G, Sidhu S, Kuhlman B, Kirschner M, Harper JW, Peters JM, Stark H, Schulman BA

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