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Showing 1 - 50 of 799 items for (author: shima & s)

EMDB-65385:
cryo-EM structure of gastric proton pump bound to YK01
Method: single particle / : Saito H, Abe K

EMDB-67107:
Cryo-EM structure of the human A2A adenosine receptor in complex with a Fab antibody fragment
Method: single particle / : Miyashita Y, Konno R, Ogasawara S, Okuda Y, Takamuku Y, Moriya T, Saito T, Murata T, Ohara O, Kawashima Y

PDB-9xqb:
Cryo-EM structure of the human A2A adenosine receptor in complex with a Fab antibody fragment
Method: single particle / : Miyashita Y, Konno R, Ogasawara S, Okuda Y, Takamuku Y, Moriya T, Saito T, Murata T, Ohara O, Kawashima Y

EMDB-65716:
Cryo-EM structure of the close-packed di-hexasome (CPDH)
Method: single particle / : Ho CH, Takizawa Y, Kurumizaka H

PDB-9w74:
Cryo-EM structure of the close-packed di-hexasome (CPDH)
Method: single particle / : Ho CH, Takizawa Y, Kurumizaka H

EMDB-65136:
Cryo-EM structure of a human flippase mutant ATP11C Q79E-CDC50A in PtdCho-occluded E2-AlF state
Method: single particle / : Qian Y, Abe K

EMDB-65217:
Cryo-EM structure of a human flippase mutant ATP11C Q79E-CDC50A in PtdSer-occluded E2P-AlF state
Method: single particle / : Qian Y, Abe K

EMDB-65258:
Cryo-EM structure of a human flippase mutant ATP11C Q79A-CDC50A in the PtdSer-occluded E2-AlF state
Method: single particle / : Qian Y, Abe K

EMDB-65302:
Cryo-EM structrure of a human flippase mutant ATP11C Q79E-CDC50A in PtdCho-open E2-BeF state
Method: single particle / : Qian Y, Abe K

PDB-9vkg:
Cryo-EM structure of a human flippase mutant ATP11C Q79E-CDC50A in PtdCho-occluded E2-AlF state
Method: single particle / : Qian Y, Abe K

PDB-9vnt:
Cryo-EM structure of a human flippase mutant ATP11C Q79E-CDC50A in PtdSer-occluded E2P-AlF state
Method: single particle / : Qian Y, Abe K

PDB-9vq2:
Cryo-EM structure of a human flippase mutant ATP11C Q79A-CDC50A in the PtdSer-occluded E2-AlF state
Method: single particle / : Qian Y, Abe K

PDB-9vsl:
Cryo-EM structrure of a human flippase mutant ATP11C Q79E-CDC50A in PtdCho-open E2-BeF state
Method: single particle / : Qian Y, Abe K

EMDB-61242:
Cryo-EM structure of native NCP-UV-DDB complex
Method: single particle / : Matsumoto S, Takizawa Y, Ogasawara M, Hashimoto K, Negishi L, Xu W, Tachibana H, Yamamoto J, Iwai S, Sugasawa K, Kurumizaka H

EMDB-61243:
Cryo-EM structure of NCP-UV-DDB complex containing CPD
Method: single particle / : Matsumoto S, Takizawa Y, Ogasawara M, Hashimoto K, Negishi L, Xu W, Tachibana H, Yamamoto J, Iwai S, Sugasawa K, Kurumizaka H

EMDB-61246:
Cryo-EM structure of UV-DDB bound to native NCP at SHL+/-2
Method: single particle / : Matsumoto S, Takizawa Y, Ogasawara M, Hashimoto K, Negishi L, Xu W, Tachibana H, Yamamoto J, Iwai S, Sugasawa K, Kurumizaka H

EMDB-61247:
Cryo-EM structure of UV-DDB bound to native NCP at SHL+/-3
Method: single particle / : Matsumoto S, Takizawa Y, Ogasawara M, Hashimoto K, Negishi L, Xu W, Tachibana H, Yamamoto J, Iwai S, Sugasawa K, Kurumizaka H

EMDB-61248:
Cryo-EM structure of UV-DDB bound to native NCP at SHL+/-6
Method: single particle / : Matsumoto S, Takizawa Y, Ogasawara M, Hashimoto K, Negishi L, Xu W, Tachibana H, Yamamoto J, Iwai S, Sugasawa K, Kurumizaka H

PDB-9j8w:
Cryo-EM structure of NCP-UV-DDB complex containing CPD
Method: single particle / : Matsumoto S, Takizawa Y, Ogasawara M, Hashimoto K, Negishi L, Xu W, Tachibana H, Yamamoto J, Iwai S, Sugasawa K, Kurumizaka H

EMDB-66460:
Cryo-EM Structure of human complement C1s CUB domain in complex with RAY121
Method: single particle / : Kawauchi H, Adrian H, Gupta G, Koga H, Fujii T, Fukumura T, Ishino S, Irie M, Torizawa T

PDB-9x1h:
Cryo-EM Structure of human complement C1s CUB domain in complex with RAY121
Method: single particle / : Kawauchi H, Adrian H, Gupta G, Koga H, Fujii T, Fukumura T, Ishino S, Irie M, Torizawa T

EMDB-62378:
Cryo-EM structure of the Retron-Eco7 complex (state 1)
Method: single particle / : Ishikawa J, Yoneyama K, Yamashita K, Nishimasu H

EMDB-62379:
Cryo-EM structure of the Retron-Eco7 complex (state 2)
Method: single particle / : Ishikawa J, Yoneyama K, Yamashita K, Nishimasu H

EMDB-62380:
Cryo-EM structure of the Retron-Eco7 complex (state 3)
Method: single particle / : Ishikawa J, Yoneyama K, Yamashita K, Nishimasu H

EMDB-62381:
Cryo-EM structure of the Retron-Eco7 complex (state 4)
Method: single particle / : Ishikawa J, Yoneyama K, Yamashita K, Nishimasu H

EMDB-62382:
Cryo-EM structure of the Retron-Eco7 complex (state 5)
Method: single particle / : Ishikawa J, Yoneyama K, Yamashita K, Nishimasu H

PDB-9kjx:
Cryo-EM structure of the Retron-Eco7 complex (state 1)
Method: single particle / : Ishikawa J, Yoneyama K, Yamashita K, Nishimasu H

PDB-9kjy:
Cryo-EM structure of the Retron-Eco7 complex (state 2)
Method: single particle / : Ishikawa J, Yoneyama K, Yamashita K, Nishimasu H

PDB-9kjz:
Cryo-EM structure of the Retron-Eco7 complex (state 3)
Method: single particle / : Ishikawa J, Yoneyama K, Yamashita K, Nishimasu H

PDB-9kk1:
Cryo-EM structure of the Retron-Eco7 complex (state 4)
Method: single particle / : Ishikawa J, Yoneyama K, Yamashita K, Nishimasu H

PDB-9kk2:
Cryo-EM structure of the Retron-Eco7 complex (state 5)
Method: single particle / : Ishikawa J, Yoneyama K, Yamashita K, Nishimasu H

EMDB-44747:
A broadly-neutralizing antibody against Ebolavirus glycoprotein that can potentiate the breadth and neutralization potency of other anti-glycoprotein antibodies
Method: single particle / : Donnellan FR, Rayaprolu V, Rijal P, O'Dowd V, Parvate A, Callaway H, Hariharan C, Parekh D, Hui S, Shaffer K, Hastie K, Shimanski L, Muller-Krauter H, Stecker T, Balaram A, Halfmann P, Saphire EO, Lightwood DJ, Townsend AR, Draper SJ

PDB-9bop:
A broadly-neutralizing antibody against Ebolavirus glycoprotein that can potentiate the breadth and neutralization potency of other anti-glycoprotein antibodies
Method: single particle / : Donnellan FR, Rayaprolu V, Rijal P, O'Dowd V, Parvate A, Callaway H, Hariharan C, Parekh D, Hui S, Shaffer K, Hastie K, Shimanski L, Muller-Krauter H, Stecker T, Balaram A, Halfmann P, Saphire EO, Lightwood DJ, Townsend AR, Draper SJ

EMDB-39941:
Cryo-EM structure of eSaCas9_NNG-guide RNA-target DNA complex in an interrogation state
Method: single particle / : Omura SN, Nakagawa R, Yamashita K, Nishimasu H, Nureki O

EMDB-39942:
Cryo-EM structure of eSaCas9_NNG-guide RNA-target DNA complex in an interrogation state
Method: single particle / : Omura SN, Nakagawa R, Yamashita K, Nishimasu H, Nureki O

EMDB-39944:
Cryo-EM structure of eSaCas9_NNG-guide RNA-target DNA complex in a translocation state
Method: single particle / : Omura SN, Nakagawa R, Yamashita K, Nishimasu H, Nureki O

EMDB-39954:
Cryo-EM structure of eSaCas9_NNG-guide RNA-target DNA complex in a catalytically active state
Method: single particle / : Omura SN, Nakagawa R, Yamashita K, Nishimasu H, Nureki O

PDB-8zcy:
Cryo-EM structure of eSaCas9_NNG-guide RNA-target DNA complex in an interrogation state
Method: single particle / : Omura SN, Nakagawa R, Yamashita K, Nishimasu H, Nureki O

PDB-8zcz:
Cryo-EM structure of eSaCas9_NNG-guide RNA-target DNA complex in an interrogation state
Method: single particle / : Omura SN, Nakagawa R, Yamashita K, Nishimasu H, Nureki O

PDB-8zd0:
Cryo-EM structure of eSaCas9_NNG-guide RNA-target DNA complex in a translocation state
Method: single particle / : Omura SN, Nakagawa R, Yamashita K, Nishimasu H, Nureki O

PDB-8zda:
Cryo-EM structure of eSaCas9_NNG-guide RNA-target DNA complex in a catalytically active state
Method: single particle / : Omura SN, Nakagawa R, Yamashita K, Nishimasu H, Nureki O

EMDB-48922:
Endogenous Pfs230D13-14 in complex with Pfs48/45 bound to anti-Pfs48/45 Fabs RUPA-71 and RUPA-44
Method: single particle / : Hailemariam S, Heide F, Bekkering E, Ivanochko D, Yoo R, Julien JP

PDB-9n5i:
Endogenous Pfs230D13-14 in complex with Pfs48/45 bound to anti-Pfs48/45 Fabs RUPA-71 and RUPA-44
Method: single particle / : Hailemariam S, Heide F, Bekkering E, Ivanochko D, Yoo R, Julien JP

EMDB-48921:
Endogenous Pfs230D1-6 in complex with RUPA-97, LMIV230-01, and 2A2 Fab domains
Method: single particle / : Heide F, Yoo R, Ivanochko D, Hailemariam S, Bekkering E, Julien JP

EMDB-48924:
Endogenous Pfs230D9-14 in complex with Pfs48/45
Method: single particle / : Heide F, Ivanochko D, Bekkering E, Yoo R, Hailemariam S, Julien JP

EMDB-48941:
Endogenous Pfs230D7-8 in complex with 18F25
Method: single particle / : Jackman JJ, Yoo R, Ivanochko D, Hailemariam S, Bekkering E, Julien JP

PDB-9n5h:
Endogenous Pfs230D1-6 in complex with RUPA-97, LMIV230-01, and 2A2 Fab domains
Method: single particle / : Heide F, Yoo R, Ivanochko D, Hailemariam S, Bekkering E, Julien JP

PDB-9n5k:
Endogenous Pfs230D9-14 in complex with Pfs48/45
Method: single particle / : Heide F, Ivanochko D, Bekkering E, Yoo R, Hailemariam S, Julien JP

PDB-9n5o:
Endogenous Pfs230D7-8 in complex with 18F25
Method: single particle / : Jackman JJ, Yoo R, Ivanochko D, Hailemariam S, Bekkering E, Julien JP

EMDB-63950:
Cryo-EM structure of Leminorella grimontii GatC in the presence of D-xylose
Method: single particle / : Takahashi YS, Kohga H, Shigematsu H, Miyazaki R, Tsukazaki T

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

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Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

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Jul 5, 2019. Downlodablable text data

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Related info.:EMN Search / EMN Statistics

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Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

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