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Structure paper

TitleDesign, Synthesis, and Structural Analysis of an Inhibitor of the Gastric Proton Pump with a Diaza-tricyclic Skeleton
Journal, issue, pagesOrg. Biomol. Chem., Year 2025
Publish dateJul 16, 2025 (structure data deposition date)
AuthorsUmekubo N / Hashizume A / Saito H / Kato S / Kanai C / Gopalasingam CC / Gerle C / Shigematsu H / Yoshimori A / Abe K / Yokoshima S
External linksOrg. Biomol. Chem. / Search PubMed
MethodsEM (single particle)
Resolution2.66 Å
Structure data

65385

9vvo

EMDB-65385, PDB-9vvo:
cryo-EM structure of gastric proton pump bound to YK01
Method: EM (single particle) / Resolution: 2.66 Å

Chemicals

ChemComp-PCW:
1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE / DOPC, phospholipid*YM

ChemComp-MG:
Unknown entry

PDB-1ma7:
Crystal structure of Cre site-specific recombinase complexed with a mutant DNA substrate, LoxP-A8/T27

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-CLR:
CHOLESTEROL

ChemComp-HOH:
WATER

Source
  • sus scrofa (pig)
KeywordsMEMBRANE PROTEIN / P-type ATPase / transporters / gastric / P-CABs / proton pump

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