[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 114 items for (author: shi & wp)

EMDB-64513:
The NuA3 histone acetyltransferase complex
Method: single particle / : Shi WP, Wang YR, Zhang HQ

EMDB-53068:
Cryo-EM map of P. furiosus 70S grown at 95 degrees
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53069:
Cryo-EM map of P. furiosus 70S grown at 95 degC, focused on the lsu
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53070:
Cryo-EM map of P. furiosus 70S grown at 95 degC, focused on the ssu body
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53071:
Cryo-EM map of P. furiosus 70S grown at 95 degC, focused on the ssu head
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53072:
Consensus cryo-EM map of P furiosus 70S grown at 102degC
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53073:
Cryo-EM map of P. furiosus 70S grown at 102 degC, focused on the lsu
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53074:
Cryo-EM map of P. furiosus 70S grown at 102 degC, focused on the ssu body
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53076:
Cryo-EM map of P. furiosus 70S grown at 102 degC, focused on the ssu head
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53077:
Consensus cryo-EM map of P. furiosus 70S in RsmB deleted strain
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53078:
Cryo-EM map of P. furiosus 70S in RsmB deleted strain, focused on the lsu
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53079:
Cryo-EM map of P. furiosus 70S in RsmB deleted strain, focused on the ssu body
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53080:
Cryo-EM map of P. furiosus 70S in RsmB deleted strain, focused on the ssu head
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53098:
Structure of P. furiosus 70S ribosome grown at 95 degC
Method: single particle / : Matzov D, Georgeson G, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53099:
Structure of P. furiosus 70S ribosome grown at 102deg
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53100:
Structure of P. furiosus 70S ribosome in RsmB deleted strain
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

PDB-9qf4:
Structure of P. furiosus 70S ribosome grown at 95 degC
Method: single particle / : Matzov D, Georgeson G, Westhof E, Schwartz S, Shalev-Benami M

PDB-9qf5:
Structure of P. furiosus 70S ribosome grown at 102deg
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

PDB-9qf6:
Structure of P. furiosus 70S ribosome in RsmB deleted strain
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-46715:
MERS NTD-specific polyclonal antibodies
Method: single particle / : Ward AB, Bangaru S

EMDB-41617:
CryoEM structure of PI3Kalpha
Method: single particle / : Valverde R, Shi H, Holliday M, Sun M

EMDB-27061:
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 2-57
Method: single particle / : Huang W, Taylor D

EMDB-27067:
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 1-22
Method: single particle / : Huang W, Taylor D

EMDB-27068:
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 2-65
Method: single particle / : Huang W, Taylor D

EMDB-27069:
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 2-34
Method: single particle / : Huang W, Taylor D

EMDB-27071:
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 1-23
Method: single particle / : Huang W, Taylor D

EMDB-27072:
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 2-67
Method: single particle / : Huang W, Taylor D

EMDB-27073:
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 1-8
Method: single particle / : Huang W, Taylor D

EMDB-27074:
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 2-34
Method: single particle / : Huang W, Taylor D

EMDB-27075:
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 2-45
Method: single particle / : Huang W, Taylor D

EMDB-27080:
RBD of SARS-CoV-2 Spike protein in complex with pan-sarbecovirus nanobodies 2-10, 2-67, 2-62 and 1-25
Method: single particle / : Huang W, Taylor D

EMDB-26281:
TMEM106B(120-254) singlet amyloid fibril from dementia with Lewy bodies (DLB).
Method: helical / : Chang A, Xiang X, Wang J, Lee C, Arakhamia T, Simjanoska M, Wang C, Carlomagno Y, Zhang G, Dhingra S, Thierry M, Perneel J, Heeman B, Forgrave LM, DeTure M, DeMarco ML, Cook CN, Rademakers R, Dickson D, Petrucelli L, Stowell MHB, Mackenzie IRA, Fitzpatrick AWP

EMDB-26282:
TMEM106B(120-254) doublet amyloid fibril from dementia with Lewy bodies (DLB).
Method: helical / : Chang A, Xiang X, Wang J, Lee C, Arakhamia T, Simjanoska M, Wang C, Carlomagno Y, Zhang G, Dhingra S, Thierry M, Perneel J, Heeman B, Forgrave LM, DeTure M, DeMarco ML, Cook CN, Rademakers R, Dickson D, Petrucelli L, Stowell MHB, Mackenzie IRA, Fitzpatrick AWP

EMDB-26283:
Low-resolution map of tau filament from progressive supranuclear palsy (PSP) case 3.
Method: helical / : Chang A, Xiang X, Wang J, Lee C, Arakhamia T, Simjanoska M, Wang C, Carlomagno Y, Zhang G, Dhingra S, Thierry M, Perneel J, Heeman B, Forgrave LM, DeTure M, DeMarco ML, Cook CN, Rademakers R, Dickson D, Petrucelli L, Stowell MHB, Mackenzie IRA, Fitzpatrick AWP

EMDB-26284:
TMEM106B(120-254) singlet amyloid fibril from progressive supranuclear palsy (PSP) case 1.
Method: helical / : Chang A, Xiang X, Wang J, Lee C, Arakhamia T, Simjanoska M, Wang C, Carlomagno Y, Zhang G, Dhingra S, Thierry M, Perneel J, Heeman B, Forgrave LM, DeTure M, DeMarco ML, Cook CN, Rademakers R, Dickson D, Petrucelli L, Stowell MHB, Mackenzie IRA, Fitzpatrick AWP

EMDB-26285:
TMEM106B(120-254) singlet amyloid fibril from progressive supranuclear palsy (PSP) case 2.
Method: helical / : Chang A, Xiang X, Wang J, Lee C, Arakhamia T, Simjanoska M, Wang C, Carlomagno Y, Zhang G, Dhingra S, Thierry M, Perneel J, Heeman B, Forgrave LM, DeTure M, DeMarco ML, Cook CN, Rademakers R, Dickson D, Petrucelli L, Stowell MHB, Mackenzie IRA, Fitzpatrick AWP

EMDB-26286:
TMEM106B(120-254) doublet amyloid fibril from progressive supranuclear palsy (PSP) case 2.
Method: helical / : Chang A, Xiang X, Wang J, Lee C, Arakhamia T, Simjanoska M, Wang C, Carlomagno Y, Zhang G, Dhingra S, Thierry M, Perneel J, Heeman B, Forgrave LM, DeTure M, DeMarco ML, Cook CN, Rademakers R, Dickson D, Petrucelli L, Stowell MHB, Mackenzie IRA, Fitzpatrick AWP

EMDB-26268:
High-resolution map of tau filament from progressive supranuclear palsy (PSP) case 1
Method: helical / : FItzpatrick AWP, Stowell MHB

EMDB-26273:
TMEM106B(120-254) protofilament from progressive supranuclear palsy (PSP) case 2
Method: helical / : Fitzpatrick AWP, Stowell MHB

EMDB-26274:
TMEM106B(120-254) protofilament from frontotemporal lobar degeneration with TDP-43 pathology (FTLD-TDP) type A (case 1)
Method: helical / : Fitzpatrick AWP, Stowell MHB

EMDB-26275:
TMEM106B(120-254) singlet amyloid fibril from frontotemporal lobar degeneration with TDP-43 pathology (FTLD-TDP) type A (case 2)
Method: helical / : Fitzpatrick AWP, Stowell MHB

EMDB-26276:
TMEM106B(120-254) singlet amyloid fibril from frontotemporal lobar degeneration with TDP-43 pathology (FTLD-TDP) type A (case 4).
Method: helical / : Fitzpatrick AWP, Stowell MHB

EMDB-26277:
TMEM106B(120-254) singlet amyloid fibril from frontotemporal lobar degeneration with TDP-43 pathology (FTLD-TDP) type C (case 8)
Method: helical / : Fitzpatrick AWP, Stowell MHB, Chang A, Xiang X, Wang J, Lee C, Arakhamia T, Simjanoska M, Wang C, Carlomagno Y, Zhang G, Dhingra S, Thierry M, Perneel J, Heeman B, Forgrave LM, DeTure M, DeMarco ML, Cook CN, Rademakers R, Dickson D, Petrucelli L, Mackenzie IRA

EMDB-26278:
TMEM106B(120-254) singlet amyloid fibril from frontotemporal lobar degeneration with TDP-43 pathology (FTLD-TDP) type B case 2 (case 7).
Method: helical / : Fitzpatrick AWP, Stowell MHB, Chang A, Xiang X, Wang J, Lee C, Arakhamia T, Simjanoska M, Wang C, Carlomagno Y, Zhang G, Dhingra S, Thierry M, Perneel J, Heeman B, Forgrave LM, DeTure M, DeMarco ML, Cook CN, Rademakers R, Dickson D, Petrucelli L, Mackenzie IRA

EMDB-26279:
TMEM106B(120-254) protofilament from frontotemporal lobar degeneration with TDP-43 pathology (FTLD-TDP) type A (all cases combined).
Method: helical / : Fitzpatrick AWP, Stowell MHB

EMDB-26287:
TMEM106B(120-254) doublet amyloid fibril from frontotemporal lobar degeneration with TDP-43 pathology (FTLD-TDP) type C (case 8).
Method: helical / : Chang A, Xiang X, Wang J, Lee C, Arakhamia T, Simjanoska M, Wang C, Carlomagno Y, Zhang G, Dhingra S, Thierry M, Perneel J, Heeman B, Forgrave LM, DeTure M, DeMarco ML, Cook CN, Rademakers R, Dickson D, Petrucelli L, Stowell MHB, Mackenzie IRA, Fitzpatrick AWP

EMDB-26288:
TMEM106B(120-254) singlet amyloid fibril from frontotemporal lobar degeneration with TDP-43 pathology (FTLD-TDP) type B (case 6).
Method: helical / : Chang A, Xiang X, Wang J, Lee C, Arakhamia T, Simjanoska M, Wang C, Carlomagno Y, Zhang G, Dhingra S, Thierry M, Perneel J, Heeman B, Forgrave LM, DeTure M, DeMarco ML, Cook CN, Rademakers R, Dickson D, Petrucelli L, Stowell MHB, Mackenzie IRA, Fitzpatrick AWP

EMDB-26289:
TMEM106B(120-254) doublet amyloid fibril from frontotemporal lobar degeneration with TDP-43 pathology (FTLD-TDP) type A (case 5).
Method: helical / : Chang A, Xiang X, Wang J, Lee C, Arakhamia T, Simjanoska M, Wang C, Carlomagno Y, Zhang G, Dhingra S, Thierry M, Perneel J, Heeman B, Forgrave LM, DeTure M, DeMarco ML, Cook CN, Rademakers R, Dickson D, Petrucelli L, Stowell MHB, Mackenzie IRA, Fitzpatrick AWP

EMDB-26290:
TMEM106B(120-254) doublet amyloid fibril from frontotemporal lobar degeneration with TDP-43 pathology (FTLD-TDP) type A (case 4).
Method: helical / : Chang A, Xiang X, Wang J, Lee C, Arakhamia T, Simjanoska M, Wang C, Carlomagno Y, Zhang G, Dhingra S, Thierry M, Perneel J, Heeman B, Forgrave LM, DeTure M, DeMarco ML, Cook CN, Rademakers R, Dickson D, Petrucelli L, Stowell MHB, Mackenzie IRA, Fitzpatrick AWP

EMDB-26291:
TMEM106B(120-254) doublet amyloid fibril from frontotemporal lobar degeneration with TDP-43 pathology (FTLD-TDP) type A (case 3).
Method: helical / : Chang A, Xiang X, Wang J, Lee C, Arakhamia T, Simjanoska M, Wang C, Carlomagno Y, Zhang G, Dhingra S, Thierry M, Perneel J, Heeman B, Forgrave LM, DeTure M, DeMarco ML, Cook CN, Rademakers R, Dickson D, Petrucelli L, Stowell MHB, Mackenzie IRA, Fitzpatrick AWP

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more