[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 8,034 items for (author: ren & ch)

EMDB-72009:
Q10M-055 Fab in complex with HIV-1 Env Q23 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-72031:
Q12QBM-007 Fab in complex with HIV-1 Env BG505 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-72033:
Q9M-023 Fab in complex with HIV-1 Env BG505 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-72035:
Q12BBM-069 Fab in complex with HIV-1 Env BG505 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-74449:
Q7M-675 Fab in complex with HIV-1 Env WITO NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9py5:
Q10M-055 Fab in complex with HIV-1 Env Q23 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9pyd:
Q12QBM-007 Fab in complex with HIV-1 Env BG505 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9pyh:
Q9M-023 Fab in complex with HIV-1 Env BG505 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9pyk:
Q12BBM-069 Fab in complex with HIV-1 Env BG505 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-53954:
Cryo-EM structure of the consensus inward-facing apo NhaA dimer at pH 7.5
Method: single particle / : Weng TH, Safarian S, Michel H

EMDB-53955:
Cryo-EM structure of the inward-facing apo NhaA in the unplugged state at pH 7.5
Method: single particle / : Weng TH, Safarian S, Michel H

EMDB-53956:
Cryo-EM structure of the inward-facing apo NhaA in the plugged state at pH 7.5
Method: single particle / : Weng TH, Safarian S, Michel H

EMDB-53957:
Cryo-EM structure of the inward-facing apo NhaA with flexible N-terminus at pH 7.5
Method: single particle / : Weng TH, Safarian S, Michel H

EMDB-53958:
Cryo-EM structure of the inward-facing apo NhaA in the unplugged state at pH 6.3
Method: single particle / : Weng TH, Safarian S, Michel H

EMDB-53959:
Cryo-EM structure of the inward-facing apo NhaA in the plugged state at pH 6.3
Method: single particle / : Weng TH, Safarian S, Michel H

EMDB-53960:
Cryo-EM structure of the inward-facing apo NhaA with flexible N-terminus at pH 6.3
Method: single particle / : Weng TH, Safarian S, Michel H

EMDB-53961:
Cryo-EM structure of the inward-facing apo NhaA in the unplugged state at pH 5.5
Method: single particle / : Weng TH, Safarian S, Michel H

EMDB-53962:
Cryo-EM structure of the inward-facing apo NhaA in the plugged state at pH 5.5
Method: single particle / : Weng TH, Safarian S, Michel H

EMDB-53963:
Cryo-EM structure of the inward-facing apo NhaA with flexible N-terminus at pH 5.5
Method: single particle / : Weng TH, Safarian S, Michel H

EMDB-53964:
Cryo-EM structure of the inward-facing apo NhaA in the open-funnel state at pH 8.5
Method: single particle / : Weng TH, Safarian S, Michel H

EMDB-53965:
Cryo-EM structure of the inward-facing apo NhaA in the unplugged state at pH 8.5
Method: single particle / : Weng TH, Safarian S, Michel H

EMDB-53966:
Cryo-EM structure of the inward-facing apo NhaA in the plugged state at pH 8.5
Method: single particle / : Weng TH, Safarian S, Michel H

EMDB-53967:
Cryo-EM structure of the inward-facing apo NhaA with flexible N-terminus at pH 8.5
Method: single particle / : Weng TH, Safarian S, Michel H

EMDB-53968:
Cryo-EM structure of the inward-facing sodium-bound NhaA at pH 8.5
Method: single particle / : Weng TH, Safarian S, Michel H

EMDB-76694:
Cryo-EM structure of SARS-CoV-2 BA.3.2.1 spike with K852A mutation, flexible conformation
Method: single particle / : Wang Y, Hu Y, Xie X

EMDB-76706:
Cryo-EM structure of SARS-CoV-2 BA.3.2.1 spike with N529Q mutation, flexible conformation
Method: single particle / : Wang Y, Hu Y, Xie X

EMDB-76713:
Local refinement of RBDA, RBDC, and NTDB of SARS-CoV-2 BA.3.2.1 spike with K852A mutation, closed conformation
Method: single particle / : Wang Y, Hu Y, Xie X

EMDB-76849:
Cryo-EM structure of SARS-CoV-2 BA.3.2.1 spike with K852A mutation, open conformation
Method: single particle / : Wang Y, Hu Y, Xie X

EMDB-76850:
Cryo-EM structure of SARS-CoV-2 BA.3.2.1 spike with N529Q mutation, open conformation
Method: single particle / : Wang Y, Hu Y, Xie X

EMDB-76936:
Local refinement of the RBD and NTD in the closed BA.3.2.1 spike with N529Q mutant
Method: single particle / : Wang Y, Hu Y, Xie X

EMDB-55593:
Chlorophyll f-containing dimeric far-red Photosystem II from Chroococcidiopsis thermalis PCC 7203
Method: single particle / : Leong HF, Consoli G, Murray JW, Fantuzzi A, Rutherford AW

EMDB-55594:
Chlorophyll f-containing monomeric far-red Photosystem II from Calothrix sp. NIES-3974
Method: single particle / : Leong HF, Consoli G, Murray JW, Fantuzzi A, Rutherford AW

PDB-9t5t:
Chlorophyll f-containing dimeric far-red Photosystem II from Chroococcidiopsis thermalis PCC 7203
Method: single particle / : Leong HF, Consoli G, Murray JW, Fantuzzi A, Rutherford AW

PDB-9t5u:
Chlorophyll f-containing monomeric far-red Photosystem II from Calothrix sp. NIES-3974
Method: single particle / : Leong HF, Consoli G, Murray JW, Fantuzzi A, Rutherford AW

EMDB-72125:
Cryo-EM Structure of the MgtA Tetramer at 2.7 A Resolution
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

EMDB-72280:
Cryo-EM Structure of MgtA in the E2-P State at 2.7 A Resolution
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

EMDB-74405:
Cryo-EM structure of MgtA with bound AMPPCP and magnesium
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

PDB-9q1e:
Cryo-EM Structure of the MgtA Tetramer at 2.7 A Resolution
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

PDB-9q6o:
Cryo-EM Structure of MgtA in the E2-P State at 2.7 A Resolution
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

PDB-9zlk:
Cryo-EM structure of MgtA with bound AMPPCP and magnesium
Method: single particle / : Khan MB, Primeau JO, Basu PC, Morth JP, Lemieux MJ, Young HS

EMDB-75818:
Cryo-EM structure of EV-D68 B3 VLP bound by neutralizing antibody 1E11
Method: single particle / : Cheng J, Lei H, Pletnev S, Morano NC, Zhang B, Du H, Rubin S, Moss DL, Krug PW, Kanekiyo M, Pierson TC, Ruckwardt TJ, Kwong PD, Zhou T

EMDB-75894:
Cryo-EM structure of EV-D68 B3 VLP bound by neutralizing antibody 5H03
Method: single particle / : Cheng J, Lei H, Pletnev S, Morano NC, Zhang B, Du H, Rubin S, Moss DL, Krug PW, Kanekiyo M, Pierson TC, Ruckwardt TJ, Shapiro L, Kwong PD, Zhou T

PDB-11lt:
Cryo-EM structure of EV-D68 B3 VLP bound by neutralizing antibody 1E11
Method: single particle / : Cheng J, Lei H, Pletnev S, Morano NC, Zhang B, Du H, Rubin S, Moss DL, Krug PW, Kanekiyo M, Pierson TC, Ruckwardt TJ, Kwong PD, Zhou T

PDB-11ov:
Cryo-EM structure of EV-D68 B3 VLP bound by neutralizing antibody 5H03
Method: single particle / : Cheng J, Lei H, Pletnev S, Morano NC, Zhang B, Du H, Rubin S, Moss DL, Krug PW, Kanekiyo M, Pierson TC, Ruckwardt TJ, Shapiro L, Kwong PD, Zhou T

EMDB-72740:
Localized reconstruction of the asymmetric unit of SINV/EEEV in complex with Fab EEEV-33 at arm 4 at pH 5.6.
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

EMDB-72741:
Localized reconstruction of the asymmetric unit of the low pH treated back neutralized SINV/EEEV in complex with Fab fragment of the antibody EEEV-179
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

EMDB-72743:
Localized reconstruction of the asymmetric unit of SINV/EEEV in complex with Fab EEEV-179 at 40C sample.
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

EMDB-72745:
Localized reconstruction of the asymmetric unit of SINV/EEEV at pH 5.6.
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

EMDB-72746:
Localized reconstruction of the asymmetric unit of SINV/EEEV at 40C sample.
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

EMDB-72747:
Localized reconstruction of the asymmetric unit of SINV/EEEV.
Method: single particle / : Bandyopadhyay A, Klose T, Kuhn RJ

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more