[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 71 items for (author: ravichandran & r)

EMDB-48271:
CryoEM Structure of Zaire Ebola Virus Envelope Glycoprotein GP
Method: single particle / : Weidle C, Borst AJ

EMDB-48093:
NCS.1 Fab in complex with N5 NA of A/shorebird/Delaware Bay/309/2016 (DB16, H10N5) -- 4 Fabs
Method: single particle / : Borst AJ

EMDB-48101:
NCS.1 Fab in complex with N5 NA of A/shorebird/Delaware Bay/309/2016 (DB16, H10N5) -- 3 Fabs
Method: single particle / : Borst AJ

EMDB-48102:
NCS.1.1 Fab in complex with the sNAp of A/California/04/2009 (CA09, H1N1) -- 4 Fabs [C4 Reconstruction]
Method: single particle / : Borst AJ

EMDB-70264:
NCS.1.1 Fab in complex with the sNAp of A/California/04/2009 (CA09, H1N1) -- 4 Fabs [C1 Reconstruction]
Method: single particle / : Borst AJ

PDB-9eit:
NCS.1 Fab in complex with N5 NA of A/shorebird/Delaware Bay/309/2016 (DB16, H10N5) -- 4 Fabs
Method: single particle / : Borst AJ

PDB-9eje:
NCS.1 Fab in complex with N5 NA of A/shorebird/Delaware Bay/309/2016 (DB16, H10N5) -- 3 Fabs
Method: single particle / : Borst AJ

PDB-9ejf:
NCS.1.1 Fab in complex with the sNAp of A/California/04/2009 (CA09, H1N1) -- 4 Fabs [C4 Reconstruction]
Method: single particle / : Borst AJ

PDB-9o9v:
NCS.1.1 Fab in complex with the sNAp of A/California/04/2009 (CA09, H1N1) -- 4 Fabs [C1 Reconstruction]
Method: single particle / : Borst AJ

EMDB-46824:
Polyclonal immune complex of human subject 321-2006 Fab binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-46825:
Polyclonal immune complex of human subject 321-2009 Fab binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-46827:
Polyclonal immune complex of human subject 321-2012 Fab binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-46829:
Polyclonal immune complex of Fab from Cynomolgus Macaque 6974 at week 12 binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-46830:
Polyclonal immune complex of Fab from Rhesus Macaque BB798E at week 12 binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-46831:
Polyclonal immune complex of Fab from Cynomolgus Macaque T009 at week 12 binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-46832:
Polyclonal immune complex of Fab from Cynomolgus Macaque R996 at week 12 binding H1 HA
Method: single particle / : Han J, Rodriguez AJ, Ferguson JA, Ward AB

EMDB-45636:
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab BB798E 3-C07
Method: single particle / : Li N, Tsybovsky Y, Sangesland M, Kanekiyo M

EMDB-45637:
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab T009 3-E04
Method: single particle / : Li N, Tsybovsky Y, Sangesland M, Kanekiyo M

PDB-9cjy:
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab BB798E 3-C07
Method: single particle / : Li N, Tsybovsky Y, Sangesland M, Kanekiyo M

PDB-9cjz:
CryoEM structure of NC99 hemagglutinin trimer in complex with Fab T009 3-E04
Method: single particle / : Li N, Tsybovsky Y, Sangesland M, Kanekiyo M

EMDB-47034:
Pseudosymmetric protein nanocages: GI4-F7 nanocage
Method: single particle / : Park YJ, Dowling QM, Seattle Structural Genomics Center for Infectious Disease (SSGCID), King NP, Veesler D

EMDB-47037:
Pseudosymmetric protein nanocage GI9-F7
Method: single particle / : Park YJ, Dowling QM, Seattle Structural Genomics Center for Infectious Disease (SSGCID), King NP, Veesler D

EMDB-47039:
Pseudosymmetric protein nanocage GI16-F7
Method: single particle / : Park YJ, Dowling QM, Seattle Structural Genomics Center for Infectious Disease (SSGCID), King NP, Veesler D

EMDB-19967:
Cryo-electron microscopy structure of the Chaetomium thermofilum Uba4-Urm1 complex
Method: single particle / : Kwasna D, Sokolowski M, Jaciuk M, Glatt S

EMDB-47036:
Pseudosymmetric protein nanocage GI4 -F7 (local refinement)
Method: single particle / : Park YJ, Dowling QM, Seattle Structural Genomics Center for Infectious Disease (SSGCID), King NP, Veesler D

EMDB-47038:
Pseudosymmetric protein nanocage GI9-F7 (local refinement)
Method: single particle / : Park YJ, Dowling QM, King NP, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-9dnd:
Pseudosymmetric protein nanocage GI4 -F7 (local refinement)
Method: single particle / : Park YJ, Dowling QM, Seattle Structural Genomics Center for Infectious Disease (SSGCID), King NP, Veesler D

PDB-9dne:
Pseudosymmetric protein nanocage GI9-F7 (local refinement)
Method: single particle / : Park YJ, Dowling QM, King NP, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-47577:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV NTD-I53-50 in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47580:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV S-2P in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47583:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV S-2P in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47584:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV S-2P-I53-50 in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47585:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV S-2P-I53-50 in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47586:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV S-2P-T33_dn10 in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47587:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV S-2P-T33_dn10 in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47588:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV RBD-I53-50 in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47589:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV RBD-I53-50 in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-47592:
Negative stain EM map of polyclonal serum from mouse immunized with MERS-CoV RBD-I53-50 in complex with MERS S-2P
Method: single particle / : Chao CW, King NP

EMDB-41153:
Integrin alpha-v beta-8 in complex with minibinder B8_BP_dsulf
Method: single particle / : Campbell MG, Fernandez A, Roy A, Kraft J, Baker D

EMDB-41154:
Integrin alpha-v beta-6 in complex with minibinder B6_BP_dslf
Method: single particle / : Campbell MG, Fernandez A, Roy A, Kraft J, Baker D

PDB-8tcf:
Integrin alpha-v beta-8 in complex with minibinder B8_BP_dsulf
Method: single particle / : Campbell MG, Fernandez A, Roy A, Kraft J, Baker D

PDB-8tcg:
Integrin alpha-v beta-6 in complex with minibinder B6_BP_dslf
Method: single particle / : Campbell MG, Fernandez A, Roy A, Kraft J, Baker D

EMDB-26507:
SARS-CoV-2 spike in complex with Multivalent miniprotein inhibitor FUS231-P24 (2RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26508:
SARS-CoV-2 spike in complex with multivalent miniprotein inhibitor FUS231-P24 (3RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26509:
SARS-CoV-2 spike in complex with multivalent miniprotein inhibitor FUS31-G10 (2RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26510:
SARS-CoV-2 spike in complex with multivalent miniprotein inhibitor FUS31-G10 (3RBDs open)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26511:
SARS-CoV-2 spike in complex with AHB2-2GS-SB175 (local refinement of the RBD and AHB2)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-26512:
SARS-CoV-2 spike in complex with AHB2-2GS-SB175
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-7uhb:
SARS-CoV-2 spike in complex with AHB2-2GS-SB175 (local refinement of the RBD and AHB2)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-7uhc:
SARS-CoV-2 spike in complex with AHB2-2GS-SB175
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more