[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 2,388 items for (author: raj & r)

EMDB-56938:
DIT3 nanofibril
Method: helical / : Stoyanov N, Schmidt M, Faendrich M

PDB-28xg:
DIT3 nanofibril
Method: helical / : Stoyanov N, Schmidt M, Faendrich M

EMDB-55222:
CRYO-EM CONSENSUS MAP OF TRYPANOSOMA BRUCEI BLOODSTREAM FORM 80S RIBOSOME
Method: single particle / : Rajan KS, Yonath A

EMDB-55223:
CRYO-EM FOCUSED REFINEMENT MAP OF TRYPANOSOMA BRUCEI BLOODSTREAM FORM 80S RIBOSOME
Method: single particle / : Rajan KS, Yonath A

EMDB-55224:
CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI BLOODSTREAM FORM 80S RIBOSOME
Method: single particle / : Rajan KS, Yonath A

PDB-9sul:
CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI BLOODSTREAM FORM 80S RIBOSOME
Method: single particle / : Rajan KS, Yonath A

EMDB-56939:
DIT2 nanofibril
Method: helical / : Stoyanov N, Schmidt M, Faendrich M

PDB-28xh:
DIT2 nanofibril
Method: helical / : Stoyanov N, Schmidt M, Faendrich M

EMDB-73901:
Human Ferritin Heavy Chain in the presence of Mg-ATP
Method: single particle / : Nannenga BL, Rejendran A, Henley S, Terashi G, Srivastava A, Kihara D, Bou-Abdallah F

PDB-9z91:
Human Ferritin Heavy Chain in the presence of Mg-ATP
Method: single particle / : Nannenga BL, Rejendran A, Henley S, Terashi G, Srivastava A, Kihara D, Bou-Abdallah F

EMDB-59152:
T. cruzi topoisomerase II alpha bound to dsDNA and the covalent inhibitor IID432
Method: single particle / : Schenk A, Deniston C

PDB-32to:
T. cruzi topoisomerase II alpha bound to dsDNA and the covalent inhibitor IID432
Method: single particle / : Schenk A, Deniston C

EMDB-75232:
Cryo-EM structure of a chemically treated Cyanobacterial Photosystem I core with bound platinum nanoparticles
Method: single particle / : Emerson MD, Gisriel CJ

PDB-10kf:
Cryo-EM structure of a chemically treated Cyanobacterial Photosystem I core with bound platinum nanoparticles
Method: single particle / : Emerson MD, Gisriel CJ

EMDB-75687:
Rabbit 60S ribosomal subunit with eEF2 domain IV closed
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

EMDB-75689:
Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

EMDB-75704:
Rabbit 60S ribosomal subunit with eEF2 domain IV open
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

EMDB-75724:
Rabbit 80S with eEF2,eIF5A and SERBP1
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

EMDB-75740:
Rabbit 80S with eEF2,IFRD2 and LARP1,40S-head-swiveled
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

EMDB-75768:
Rabbit 80S with IFRD2 and LARP1, 40S head-swiveled
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorrieff N, Korostelev AA

PDB-11he:
Rabbit 60S ribosomal subunit with eEF2 domain IV closed
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

PDB-11hg:
Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

PDB-11hv:
Rabbit 60S ribosomal subunit with eEF2 domain IV open
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

PDB-11iq:
Rabbit 80S with eEF2,eIF5A and SERBP1
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

PDB-11jj:
Rabbit 80S with eEF2,IFRD2 and LARP1,40S-head-swiveled
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

PDB-11kh:
Rabbit 80S with IFRD2 and LARP1, 40S head-swiveled
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorrieff N, Korostelev AA

EMDB-75268:
Native flagellar filament from Leptospira interrogans
Method: single particle / : Brady MR, San Martin F, Sindelar CV, Buschiazzo A

EMDB-75269:
Native flagellar filament from Leptospira interrogans flaB1- KO mutant strain
Method: single particle / : Brady MR, San Martin F, Sindelar CV, Buschiazzo A

EMDB-75270:
Native flagellar filament from Leptospira biflexa
Method: single particle / : Brady MR, San Martin F, Sindelar CV, Buschiazzo A

PDB-10lk:
Native flagellar filament from Leptospira interrogans
Method: single particle / : Brady MR, San Martin F, Sindelar CV, Buschiazzo A

PDB-10ll:
Native flagellar filament from Leptospira interrogans flaB1- KO mutant strain
Method: single particle / : Brady MR, San Martin F, Sindelar CV, Buschiazzo A

PDB-10lm:
Native flagellar filament from Leptospira biflexa
Method: single particle / : Brady MR, San Martin F, Sindelar CV, Buschiazzo A

EMDB-56657:
CTX/MthK complex
Method: single particle / : Qoraj D, Sprink T, Lange A

PDB-28no:
CTX/MthK complex
Method: single particle / : Qoraj D, Sprink T, Lange A

EMDB-49696:
Subtomogram Average of the Nipah Virus Matrix Lattice in Complex with Human Cell Membrane inside Virus-Like-Particles
Method: subtomogram averaging / : Upadhye VV, Dick RA

PDB-9nqy:
Nipah Virus Matrix Lattice in Complex with Human Cell Membrane
Method: subtomogram averaging / : Upadhye VV, Dick RA

EMDB-54637:
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in intermediate state (AP*)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-54638:
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-54639:
Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in open state (open COX1-mtRNC-OXA1L/MITRAC)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-54640:
Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in closed state (closed COX1-mtRNC-OXA1L/MITRAC)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-55836:
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with peptidyl-tRNA (P)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-55837:
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in classical pre-translocation state (AP)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-55838:
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in late hybrid state (H2)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

PDB-9s7b:
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in intermediate state (AP*)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

PDB-9s7c:
Structure of human mitochondrial COX1-translating ribosome nascent chain complex with tRNAs in initial hybrid state (H1)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

PDB-9s7d:
Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in open state (open COX1-mtRNC-OXA1L/MITRAC)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

PDB-9s7e:
Structure of human mitochondrial COX1-translating ribosome nascent chain-OXA1L/MITRAC complex in closed state (closed COX1-mtRNC-OXA1L/MITRAC)
Method: single particle / : Schoendorf T, Petrychenko V, Kotan I, Cruz-Zaragoza LD, Dahal D, Wang C, Gal T, Dennerlein S, Kramer G, Fischer N, Rehling P

EMDB-55069:
Cryo-EM structure of the ARISC(E33A)-RAP80:K63-Ub7 complex (Left Arm map)
Method: single particle / : Foglizzo M, Zeqiraj E

EMDB-55070:
Cryo-EM structure of the ARISC(E33A)-RAP80:K63-Ub7 complex (Non-catalytic Ub, Left Arm map)
Method: single particle / : Foglizzo M, Zeqiraj E

EMDB-55071:
Cryo-EM structure of the ARISC(E33A)-RAP80:K63-Ub7 complex (Non-catalytic Ub, Right Arm map)
Method: single particle / : Foglizzo M, Zeqiraj E

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more