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Showing all 40 items for (author: pengcheng & h)

EMDB-37989:
Cryo-EM structure of FpGalactosaminidase from Flavonifractor plautii in apo state
Method: single particle / : Guoqiu W, Pengcheng H, Chao S, Meiling Z, Kaishan L

PDB-8x1b:
Cryo-EM structure of FpGalactosaminidase from Flavonifractor plautii in apo state
Method: single particle / : Guoqiu W, Pengcheng H, Chao S, Meiling Z, Kaishan L

EMDB-37626:
Cryo-EM structure of SARS-CoV-2 prototype spike protein in complex with hippopotamus ACE2
Method: single particle / : Han P, Yang RR, Li SH

EMDB-37629:
Cryo-EM structure of SARS-CoV-2 prototype spike protein receptor-binding domain in complex with hippopotamus ACE2
Method: single particle / : Han P, Yang RR, Li SH

PDB-8wlo:
Cryo-EM structure of SARS-CoV-2 prototype spike protein in complex with hippopotamus ACE2
Method: single particle / : Han P, Yang RR, Li SH

PDB-8wlr:
Cryo-EM structure of SARS-CoV-2 prototype spike protein receptor-binding domain in complex with hippopotamus ACE2
Method: single particle / : Han P, Yang RR, Li SH

EMDB-37006:
Cryo-EM structure of SARS-CoV-2 Delta RBD in complex with golden hamster ACE2 (local refinement)
Method: single particle / : Niu S, Zhao ZN, Chai Y, Gao GF

EMDB-37090:
Cryo-EM structure of SARS-CoV-2 BA.3 RBD in complex with golden hamster ACE2 (local refinement)
Method: single particle / : Niu S, Zhao ZN, Chai Y, Gao GF

PDB-8ka8:
Cryo-EM structure of SARS-CoV-2 Delta RBD in complex with golden hamster ACE2 (local refinement)
Method: single particle / : Niu S, Zhao ZN, Chai Y, Gao GF

PDB-8kc2:
Cryo-EM structure of SARS-CoV-2 BA.3 RBD in complex with golden hamster ACE2 (local refinement)
Method: single particle / : Niu S, Zhao ZN, Chai Y, Gao GF

EMDB-32726:
Cryo-EM structure of SARS-CoV-2 Omicron BA.1 spike protein in complex with mouse ACE2
Method: single particle / : Han P, Xie Y, Qi J

PDB-7wrh:
Cryo-EM structure of SARS-CoV-2 Omicron BA.1 spike protein in complex with mouse ACE2
Method: single particle / : Han P, Xie Y, Qi J

EMDB-33697:
Cryo-EM structure of SARS-CoV-2 Omicron spike protein (S-6P-RRAR) in complex with human ACE2 ectodomain (one-RBD-up state)
Method: single particle / : Gao GF, Qi JX, Liu S, Zhao ZN

EMDB-33698:
Cryo-EM structure of hACE2-bound SARS-CoV-2 Omicron spike protein with L371S, P373S and F375S mutations (S-6P-RRAR)
Method: single particle / : Zhao ZN, Xie YF, Qi JX, Gao GF

PDB-7y9z:
Cryo-EM structure of SARS-CoV-2 Omicron spike protein (S-6P-RRAR) in complex with human ACE2 ectodomain (one-RBD-up state)
Method: single particle / : Gao GF, Qi JX, Liu S, Zhao ZN

PDB-7ya0:
Cryo-EM structure of hACE2-bound SARS-CoV-2 Omicron spike protein with L371S, P373S and F375S mutations (S-6P-RRAR)
Method: single particle / : Zhao ZN, Xie YF, Qi JX, Gao GF

EMDB-33690:
Cryo-EM structure of apo SARS-CoV-2 Omicron spike protein (S-2P-GSAS)
Method: single particle / : Zhao ZN, Xie YF, Qi JX, Gao GF

EMDB-33699:
Cryo-EM structure of hACE2-bound SARS-CoV-2 Omicron spike protein with L371S, P373S and F375S mutations (local refinement)
Method: single particle / : Zhao ZN, Xie YF, Qi JX, Gao GF

EMDB-33709:
Cryo-EM structure of S309-RBD-RBD-S309 in the S309-bound Omicron spike protein (local refinement)
Method: single particle / : Zhao ZN, Xie YF, Qi JX, Gao F

PDB-7y9s:
Cryo-EM structure of apo SARS-CoV-2 Omicron spike protein (S-2P-GSAS)
Method: single particle / : Zhao ZN, Xie YF, Qi JX, Gao GF

PDB-7ya1:
Cryo-EM structure of hACE2-bound SARS-CoV-2 Omicron spike protein with L371S, P373S and F375S mutations (local refinement)
Method: single particle / : Zhao ZN, Xie YF, Qi JX, Gao GF

PDB-7yad:
Cryo-EM structure of S309-RBD-RBD-S309 in the S309-bound Omicron spike protein (local refinement)
Method: single particle / : Zhao ZN, Xie YF, Qi JX, Gao F

EMDB-32358:
Structure of SARS-CoV-2 spike receptor-binding domain Y453F mutation complexed with American mink ACE2
Method: single particle / : Su C, Qi JX

EMDB-32379:
Structure of SARS-CoV-2 spike receptor-binding domain F486L mutation complexed with American mink ACE2
Method: single particle / : Su C, Qi JX, Gao GF

PDB-7w8s:
Structure of SARS-CoV-2 spike receptor-binding domain Y453F mutation complexed with American mink ACE2
Method: single particle / : Su C, Qi JX, Gao GF

PDB-7wa1:
Structure of SARS-CoV-2 spike receptor-binding domain F486L mutation complexed with American mink ACE2
Method: single particle / : Su C, Qi JX, Gao GF

EMDB-27690:
Cryo-EM structure of spike binding to Fab of neutralizing antibody (locally refined)
Method: single particle / : Sun PC, Fang Y, Bai XC, Chen ZJ

PDB-8dt3:
Cryo-EM structure of spike binding to Fab of neutralizing antibody (locally refined)
Method: single particle / : Sun PC, Fang Y, Bai XC, Chen ZJ

EMDB-32944:
The complex structure of Omicron BA.1 RBD with BD604, S309,and S304
Method: single particle / : Huang M, Xie YF

PDB-7x1m:
The complex structure of Omicron BA.1 RBD with BD604, S309,and S304
Method: single particle / : Huang M, Xie YF, Qi JX

EMDB-32727:
Cryo-EM structure of SARS-CoV-2 Omicron spike receptor-binding domain in complex with mouse ACE2
Method: single particle / : Han P, Xie Y

PDB-7wri:
Cryo-EM structure of SARS-CoV-2 Omicron spike receptor-binding domain in complex with mouse ACE2
Method: single particle / : Han P, Xie Y, Qi J

EMDB-32405:
Cryo-EM structure of human ACE2 complexed with SARS-CoV-2 Omicron RBD
Method: single particle / : Liu S, Gao FG

PDB-7wbl:
Cryo-EM structure of human ACE2 complexed with SARS-CoV-2 Omicron RBD
Method: single particle / : Liu S, Gao FG

EMDB-30653:
Cryo-EM structure of human ACE2 and GX/P2V/2017 RBD
Method: single particle / : Niu S, Wang J, Wang HW, Qi JX, Wang QH, Gao GF

EMDB-30655:
Cryo-EM structure of human ACE2 and GD/1/2019 RBD
Method: single particle / : Niu S, Wang J, Wang HW, Qi JX, Wang QH, Gao GF

PDB-7ddo:
Cryo-EM structure of human ACE2 and GD/1/2019 RBD
Method: single particle / : Niu S, Wang J, Wang HW, Qi JX, Wang QH, Gao GF

PDB-7ddp:
Cryo-EM structure of human ACE2 and GX/P2V/2017 RBD
Method: single particle / : Niu S, Wang J, Wang HW, Qi JX, Wang QH, Gao GF

EMDB-30305:
Cryo-EM structure of cat ACE2 and SARS-CoV-2 RBD
Method: single particle / : Gao GF, Wang QH, Wu L

PDB-7c8d:
Cryo-EM structure of cat ACE2 and SARS-CoV-2 RBD
Method: single particle / : Gao GF, Wang QH, Wu Ll

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

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Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

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Jul 5, 2019. Downlodablable text data

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Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

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Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

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