[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 219 items for (author: ouyang & s)

EMDB-65405:
The cryo-EM structure of gRNA-bound SPARDA complex
Method: single particle / : Li Y, Jiang Y, Zheng Q, Li S

EMDB-65406:
Helical structure of gRNA-tDNA SPARDA complex
Method: helical / : Li Y, Zheng Q, Li S, Jiang Y

PDB-9vx1:
The cryo-EM structure of gRNA-bound SPARDA complex
Method: single particle / : Li Y, Jiang Y, Zheng Q, Li S

PDB-9vx6:
Helical structure of gRNA-tDNA SPARDA complex
Method: helical / : Li Y, Zheng Q, Li S, Jiang Y

EMDB-52521:
Agrobacterium phage 7-7-1 tail
Method: single particle / : Noteborn WEM, Hoeksma T, Rouchen OY, Briegel A

EMDB-52522:
Agrobacterium phage 7-7-1 capsid
Method: single particle / : Noteborn WEM, Hoeksma T, Rouchen OY, Briegel A

EMDB-53352:
Cryo-tomogram of Agrobacterium phage 7-7-1 and Agrobacterium sp. H13-3
Method: electron tomography / : Noteborn WEM, Hoeksma T, Rouchen OY, Briegel A

EMDB-54017:
Agrobacterium phage 7-7-1 portal
Method: single particle / : Noteborn WEM, Hoeksma T, Briegel A

EMDB-54018:
Agrobacterium phage 7-7-1 neck 1
Method: single particle / : Noteborn WEM, Hoeksma T, Briegel A

EMDB-54019:
Agrobacterium phage 7-7-1 neck 2 + tail terminator + tail sheath + tail tube
Method: single particle / : Noteborn WEM, Hoeksma T, Briegel A

EMDB-54020:
Agrobacterium phage 7-7-1 collar
Method: single particle / : Noteborn WEM, Hoeksma T, Briegel A

EMDB-54021:
Agrobacterium phage 7-7-1 baseplate
Method: single particle / : Noteborn WEM, Hoeksma T, Briegel A

EMDB-54022:
Agrobacterium phage 7-7-1 tail spike
Method: single particle / : Noteborn WEM, Hoeksma T, Briegel A

PDB-9hz7:
Agrobacterium phage 7-7-1 tail
Method: single particle / : Noteborn WEM, Hoeksma T, Rouchen OY, Briegel A

PDB-9hz8:
Agrobacterium phage 7-7-1 capsid
Method: single particle / : Noteborn WEM, Hoeksma T, Rouchen OY, Briegel A

PDB-9rkq:
Agrobacterium phage 7-7-1 portal
Method: single particle / : Noteborn WEM, Hoeksma T, Briegel A

PDB-9rkr:
Agrobacterium phage 7-7-1 neck 1
Method: single particle / : Noteborn WEM, Hoeksma T, Briegel A

PDB-9rks:
Agrobacterium phage 7-7-1 neck 2 + tail terminator + tail sheath + tail tube
Method: single particle / : Noteborn WEM, Hoeksma T, Briegel A

PDB-9rkt:
Agrobacterium phage 7-7-1 collar
Method: single particle / : Noteborn WEM, Hoeksma T, Briegel A

PDB-9rku:
Agrobacterium phage 7-7-1 baseplate
Method: single particle / : Noteborn WEM, Hoeksma T, Briegel A

PDB-9rkv:
Agrobacterium phage 7-7-1 tail fibers
Method: single particle / : Noteborn WEM, Hoeksma T, Briegel A

EMDB-61647:
structure of nucleosome in ATP state
Method: single particle / : Sia Y, Pan H, Chen Z

EMDB-61649:
structure of nucleosome in ADP state
Method: single particle / : Sia Y, Pan H, Chen Z

EMDB-61650:
structure of nucleosome in ADP* state
Method: single particle / : Sia Y, Pan H, Chen Z

EMDB-61652:
structure of nucleosome in ADP+ state
Method: single particle / : Sia Y, Pan H, Chen Z

EMDB-61653:
structure of nucleosome in ADP*+ state
Method: single particle / : Sia Y, Pan H, Chen Z

EMDB-61654:
structure of nucleosome in Apo state
Method: single particle / : Sia Y, Pan H, Chen Z

EMDB-61655:
structure of nucleosome in Apo* state
Method: single particle / : Sia Y, Pan H, Chen Z

EMDB-61657:
structure of isw1-motor in ATP state
Method: single particle / : Sia Y, Pan H, Chen Z

EMDB-61658:
structure of isw1-motor in ADP state
Method: single particle / : Sia Y, Pan H, Chen Z

EMDB-61661:
structure of isw1-motor in ADP* state
Method: single particle / : Sia Y, Pan H, Chen Z

EMDB-61662:
structure of isw1-motor in ADP+ state
Method: single particle / : Sia Y, Pan H, Chen Z

EMDB-61663:
structure of isw1-motor in ADP*+ state
Method: single particle / : Sia Y, Pan H, Chen Z

EMDB-61665:
strcuture of isw1-motor in Apo state
Method: single particle / : Sia Y, Pan H, Chen Z

EMDB-61667:
structure of isw1-motor in Apo* state
Method: single particle / : Sia Y, Pan H, Chen Z

EMDB-61669:
Structure of isw1-motor in ADP-B state
Method: single particle / : Sia Y, Pan H, Chen Z

EMDB-61672:
Structure of nucleosome in ADP-B state
Method: single particle / : Sia Y, Pan H, Chen Z

EMDB-63138:
Structure of motor1 of isw1-nucleosome double-bound complex in ADP-ADP+ state
Method: single particle / : Sia Y, Pan H, Chen Z

EMDB-46727:
Structure of AG11-2F01 Fab in complex with A/Solomon Islands/3/2006 (H1N1) influenza virus hemagglutinin
Method: single particle / : Mou Z, Lei R, Dai X, Wu N

PDB-9dbx:
Structure of AG11-2F01 Fab in complex with A/Solomon Islands/3/2006 (H1N1) influenza virus hemagglutinin
Method: single particle / : Mou Z, Lei R, Dai X, Wu N

EMDB-45930:
Structure of 16.ND.92 Fab in complex with A/Solomon Islands/3/2006(H1N1) influenza virus Hemagglutinin
Method: single particle / : Ouyang WO, Pholcharee T, Wu NC

PDB-9cu7:
Structure of 16.ND.92 Fab in complex with A/Solomon Islands/3/2006(H1N1) influenza virus Hemagglutinin
Method: single particle / : Ouyang WO, Pholcharee T, Wu NC

EMDB-61295:
The motor of SMARCAD1 bound on hexasome
Method: single particle / : Chen ZC, Hu PJ, Sia YY, Chen KJ, Xia X

EMDB-61296:
The structure of SMARCAD1 bound to the hexasome in the presence of ADP-BeFx
Method: single particle / : Chen ZC, Hu PJ, Sia YY, Chen KJ, Xia X

EMDB-61297:
The structure of SMARCAD1 bound to the nucleosome in the presence of ADP-BeFx.
Method: single particle / : Chen ZC, Hu PJ, Sia YY, Xia X, Chen KJ

EMDB-61298:
The structure of SMARCAD1 bound to the nucleosome in Apo state.
Method: single particle / : Chen ZC, Hu PJ, Sia YY, Chen KJ, Xia X

PDB-9jao:
The structure of SMARCAD1 bound to the hexasome in the presence of ADP-BeFx
Method: single particle / : Chen ZC, Hu PJ, Sia YY, Chen KJ, Xia X

EMDB-61470:
CMF-019 with APLNR-Gi complex
Method: single particle / : Tian XW, Zhao C, Feng YY, Shao ZH, Sun JP

PDB-9jh3:
CMF-019 with APLNR-Gi complex
Method: single particle / : Tian XW, Zhao C, Feng YY, Shao ZH

EMDB-61624:
Structure of isw1-nucleosome complex in ATP state
Method: single particle / : Sia Y, Pan H, Chen Z

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more