[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 39,095 items for (author: on & k)

EMDB-53256:
Dissociation-state-3 of 9-subunit CSN and SCF (SKP1-SKP2-CKS1) complex
Method: single particle / : Ding S, Clapperton JA, Maeots ME, Enchev RI

EMDB-53257:
Dissociation-state-4 of 9-subunit CSN and SCF (SKP1-SKP2-CKS1) complex
Method: single particle / : Ding S, Clapperton JA, Maeots ME, Enchev RI

EMDB-53258:
9-subunit COP9 signalosome complex
Method: single particle / : Ding S, Clapperton JA, Maeots ME, Enchev RI

PDB-9qo4:
Dissociation-state-3 of 9-subunit CSN and SCF (SKP1-SKP2-CKS1) complex
Method: single particle / : Ding S, Clapperton JA, Maeots ME, Enchev RI

PDB-9qo5:
Dissociation-state-4 of 9-subunit CSN and SCF (SKP1-SKP2-CKS1) complex
Method: single particle / : Ding S, Clapperton JA, Maeots ME, Enchev RI

PDB-9qo6:
9-subunit COP9 signalosome complex
Method: single particle / : Ding S, Clapperton JA, Maeots ME, Enchev RI

EMDB-63785:
Cryo-EM structure of dopaminated Tau fibril
Method: helical / : Liu Z, Li X, Liu C

PDB-9mc2:
Cryo-EM structure of dopaminated Tau fibril
Method: helical / : Liu Z, Li X, Liu C

EMDB-67108:
Cryo-EM structure of Receptor of GPR75
Method: single particle / : Wu C, Yuan Q

EMDB-67109:
The cryo_EM structure of GPR75 complex
Method: single particle / : Wu C, Yuan Q

EMDB-67110:
A composite Cryo-EM structure of GPR75
Method: single particle / : Yuan Q, Wu C

EMDB-67119:
Cryo-EM structure of apo form of GPR75-bRIL-Fab complex
Method: single particle / : Wu C, Yuan Q

PDB-9xqc:
A composite Cryo-EM structure of GPR75
Method: single particle / : Yuan Q, Wu C

PDB-9xqn:
Cryo-EM structure of apo form of GPR75-bRIL-Fab complex
Method: single particle / : Wu C, Yuan Q

EMDB-55171:
30S ribosomal subunit RimM-KO with IF1 and IF3 (State I)
Method: single particle / : Hassan AH, Demo G

EMDB-55173:
30S ribosomal subunit RimM-KO with IF1 and IF3 (State II)
Method: single particle / : Hassan AH, Demo G

EMDB-55174:
30S ribosomal subunit RimM-KO with IF1 and IF3 (State III)
Method: single particle / : Hassan AH, Demo G

EMDB-55176:
pre-50S ribosomal subunit in rimM-KO with RsfS (-H68)
Method: single particle / : Hassan AH, Demo G

EMDB-55177:
50S ribosomal subunit in rimM-KO with RsfS (+H68)
Method: single particle / : Hassan AH, Demo G

EMDB-55178:
70S ribosome from RimM-KO
Method: single particle / : Hassan AH, Demo G

EMDB-55181:
30S ribosomal subunit RimM-WT with IF1 and IF3
Method: single particle / : Hassan AH, Demo G

EMDB-55182:
pre-50S ribosomal subunit from RimM-WT with RsfS (-H68)
Method: single particle / : Hassan AH, Demo G

EMDB-55183:
50S ribosomal subunit from RimM-WT with RsfS (+H68)
Method: single particle / : Hassan AH, Demo G

EMDB-55185:
70S ribosome from RimM-WT
Method: single particle / : Hassan AH, Demo G

PDB-9ss0:
30S ribosomal subunit RimM-KO with IF1 and IF3 (State I)
Method: single particle / : Hassan AH, Demo G

PDB-9ss1:
30S ribosomal subunit RimM-KO with IF1 and IF3 (State II)
Method: single particle / : Hassan AH, Demo G

PDB-9ss2:
30S ribosomal subunit RimM-KO with IF1 and IF3 (State III)
Method: single particle / : Hassan AH, Demo G

PDB-9ss4:
pre-50S ribosomal subunit in rimM-KO with RsfS (-H68)
Method: single particle / : Hassan AH, Demo G

PDB-9ss5:
50S ribosomal subunit in rimM-KO with RsfS (+H68)
Method: single particle / : Hassan AH, Demo G

PDB-9ss6:
70S ribosome from RimM-KO
Method: single particle / : Hassan AH, Demo G

EMDB-72964:
Cryo-EM structure of IDH1 R132H
Method: single particle / : Hu L, Seo HS, Dhe-Paganon S, Berezuk AM, Tuttle KS, Zhu X, Subramaniam S, Wu X

EMDB-72965:
Cryo-EM structure of IDH1 R132H C269S
Method: single particle / : Hu L, Seo HS, Dhe-Paganon S, Berezuk AM, Tuttle KS, Zhu X, Subramaniam S, Wu X

PDB-9yha:
Cryo-EM structure of IDH1 R132H
Method: single particle / : Hu L, Seo HS, Dhe-Paganon S, Berezuk AM, Tuttle KS, Zhu X, Subramaniam S, Wu X

PDB-9yhb:
Cryo-EM structure of IDH1 R132H C269S
Method: single particle / : Hu L, Seo HS, Dhe-Paganon S, Berezuk AM, Tuttle KS, Zhu X, Subramaniam S, Wu X

EMDB-63344:
Cryo-EM structure of Fission yeast centromeric nucleosome Class 1
Method: single particle / : Xiong Y, Zang J

EMDB-63345:
Cryo-EM structure of Fission yeast centromeric nucleosome Class 2
Method: single particle / : Xiong Y, Zang J

EMDB-63346:
cryo-EM structure of Mis151-249-Cnp1 nucleosome complex
Method: single particle / : Xiong Y, Zang J

PDB-9lrv:
Cryo-EM structure of Fission yeast centromeric nucleosome Class 1
Method: single particle / : Xiong Y, Zang J

PDB-9lrw:
Cryo-EM structure of Fission yeast centromeric nucleosome Class 2
Method: single particle / : Xiong Y, Zang J

EMDB-74451:
Cryo-EM structure of human UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (DPAGT1) in complex with APPB, composite map
Method: single particle / : Kirsh JM, Ochoa JM, Soroush-Pejrimovsky MT, Kaudeer BY, Clemons WM

EMDB-74452:
Cryo-EM structure of Hydrogenivirga sp. MraY in complex with APPB
Method: single particle / : Kaudeer BY, Clemons WM

EMDB-75257:
Cryo-EM structure of human UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (DPAGT1) in complex with APPB, consensus map
Method: single particle / : Kirsh JM, Ochoa JM, Soroush-Pejrimovsky MT, Kaudeer BY, Clemons WM

EMDB-75258:
Cryo-EM structure of human UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (DPAGT1) in complex with APPB, Chain A map
Method: single particle / : Kirsh JM, Ochoa JM, Soroush-Pejrimovsky MT, Kaudeer BY, Clemons WM

EMDB-75259:
Cryo-EM structure of human UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (DPAGT1) in complex with APPB, Chain B map
Method: single particle / : Kirsh JM, Ochoa JM, Soroush-Pejrimovsky MT, Kaudeer BY, Clemons WM

PDB-9znn:
Cryo-EM structure of human UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (DPAGT1) in complex with APPB
Method: single particle / : Kirsh JM, Ochoa JM, Soroush-Pejrimovsky MT, Kaudeer BY, Clemons WM

PDB-9zno:
Cryo-EM structure of Hydrogenivirga sp. MraY in complex with APPB
Method: single particle / : Kaudeer BY, Clemons WM

EMDB-49892:
Cryo-EM structure of DDB1dB:CRBN:mezigdomide:SALL4(392-449)
Method: single particle / : Park J, Hunkeler M, Roy Burman SS, Fishcer ES

EMDB-49893:
Cryo-EM structure of DDB1dB:CRBN:mezigdomide:SALL4(392-449;G416A)
Method: single particle / : Park J, Hunkeler M, Roy Burman SS, Fischer ES

PDB-9nws:
Cryo-EM structure of DDB1dB:CRBN:mezigdomide:SALL4(392-449)
Method: single particle / : Park J, Hunkeler M, Roy Burman SS, Fishcer ES

PDB-9nwt:
Cryo-EM structure of DDB1dB:CRBN:mezigdomide:SALL4(392-449;G416A)
Method: single particle / : Park J, Hunkeler M, Roy Burman SS, Fischer ES

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more