[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 602 items for (author: ols & s)

EMDB-70627:
Cryo-EM structure of a tetrameric XRCC3-RAD51C-RAD51D-XRCC2 complex
Method: single particle / : Ruben EA, Jia L, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

PDB-9on2:
Cryo-EM structure of a tetrameric XRCC3-RAD51C-RAD51D-XRCC2 complex
Method: single particle / : Ruben EA, Jia L, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

EMDB-70624:
Cryo-EM structure of an octameric RAD51-XRCC3-RAD51C (RAD51-X3C) complex
Method: single particle / : Jia L, Ruben EA, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

PDB-9omy:
Cryo-EM structure of an octameric RAD51-XRCC3-RAD51C (RAD51-X3C) complex
Method: single particle / : Jia L, Ruben EA, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

EMDB-75014:
Cryo-EM Structure of a RAD51 filament bound by ssDNA and the XRCC3-RAD51C-RAD51D-XRCC2 paralog complex
Method: single particle / : Ruben EA, Jia L, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

PDB-9zzr:
Cryo-EM Structure of a RAD51 filament bound by ssDNA and the XRCC3-RAD51C-RAD51D-XRCC2 paralog complex
Method: single particle / : Ruben EA, Jia L, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

EMDB-70625:
Cryo-EM structure of a pentameric RAD51-XRCC3-RAD51C-RAD51D-XRCC2 (51-X3CDX2) complex.
Method: single particle / : Ruben EA, Jia L, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

PDB-9omz:
Cryo-EM structure of a pentameric RAD51-XRCC3-RAD51C-RAD51D-XRCC2 (51-X3CDX2) complex.
Method: single particle / : Ruben EA, Jia L, Olsen SK, Wasmuth EV, Rawal Y, Kwon Y, Sung P

EMDB-48818:
Low resolution cryo-EM reconstruction of the DY2 collagen mimetic fibrils
Method: single particle / : Kreutzberger MAB, Cole CC, Egelman EH, Hartgerink JD

EMDB-51252:
RNAP-TopoI complex on duplex scaffold - consensus map
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51253:
RNAP-TopoI complex on duplex scaffold - focused map (TopoI)
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51254:
RNAP-TopoI complex on duplex scaffold - focused map (TopoI D2/D3)
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51255:
RNAP-TopoI complex on duplex scaffold - focused map (RNAP core)
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51256:
RNAP-TopoI complex on duplex scaffold - focused map (RNAP swivel module 1)
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51257:
RNAP-TopoI complex on duplex scaffold - focused map (RNAP swivel module 2)
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51258:
RNAP-TopoI complex on duplex scaffold - focused map (RNAP beta protrusion and lobe)
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51259:
RNAP-TopoI complex on duplex scaffold
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51260:
RNAP-TopoI complex on bubble scaffold - consensus reconstruction
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51261:
RNAP-TopoI complex on bubble scaffold - single-bubble configuration
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51262:
RNAP-TopoI complex on bubble scaffold - two-bubble configuration
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51263:
RNAP-TopoI complex on long-overhang scaffold - orientation 1
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51264:
RNAP-TopoI complex on long-overhang scaffold - orientation 2
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51265:
RNAP-TopoI complex on duplex scaffold with visible TOPRIM loop - consensus map
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51266:
RNAP-TopoI complex on duplex scaffold with visible TOPRIM loop - focused map (TopoI)
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51267:
RNAP-TopoI complex on duplex scaffold with visible TOPRIM loop
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51268:
RNAP-TopoI complex on long-overhang scaffold - orientation 3
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51269:
RNAP-TopoI complex on long-overhang scaffold - TopoI gate opening (orientation 2)
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51270:
RNAP-TopoI complex on short-overhang scaffold - orientation 1
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-51271:
RNAP-TopoI complex on short-overhang scaffold - orientation 2
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

PDB-9gda:
RNAP-TopoI complex on duplex scaffold
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

PDB-9gdb:
RNAP-TopoI complex on bubble scaffold - consensus reconstruction
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

PDB-9gdc:
RNAP-TopoI complex on bubble scaffold - single-bubble configuration
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

PDB-9gdd:
RNAP-TopoI complex on bubble scaffold - two-bubble configuration
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

PDB-9gde:
RNAP-TopoI complex on long-overhang scaffold - orientation 1
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

PDB-9gdh:
RNAP-TopoI complex on long-overhang scaffold - orientation 2
Method: single particle / : Vidmar V, Weixlbaumer A, Lamour V

EMDB-65526:
LH2 complex from Ectothiorhodospira haloalkaliphila with inhibited carotenoid biosynthesis
Method: single particle / : Burtseva AD, Baymukhametov TN, Popov VO, Ashikhmin AA, Boyko KM

PDB-9w1c:
LH2 complex from Ectothiorhodospira haloalkaliphila with inhibited carotenoid biosynthesis
Method: single particle / : Burtseva AD, Baymukhametov TN, Popov VO, Ashikhmin AA, Boyko KM

EMDB-52347:
Salmonella enterica Lamassu LmuACB in nuclease sequestration state
Method: single particle / : Li Y, Gruber S

EMDB-52349:
Salmonella enterica Lamassu LmuACB bound to DNA duplex
Method: single particle / : Li Y, Gruber S

EMDB-52355:
Salmonella enterica Lamassu LmuA nuclease tetramer bound to DNA duplex
Method: single particle / : Li Y, Gruber S

EMDB-47110:
Cryo-EM structure of a double-loaded SUMO E1-E2-SUMO1 complex.
Method: single particle / : Jia L, Nayak D, Ruben EA, Nayak A, Wasmuth EV, Olsen SK

EMDB-47127:
Cryo-EM structure of a SUMO E1-E2-SUMO1 complex.
Method: single particle / : Jia L, Nayak D, Ruben EA, Nayak A, Wasmuth EV, Olsen SK

PDB-9dqb:
Cryo-EM structure of a double-loaded SUMO E1-E2-SUMO1 complex.
Method: single particle / : Jia L, Nayak D, Ruben EA, Nayak A, Wasmuth EV, Olsen SK

PDB-9drj:
Cryo-EM structure of a SUMO E1-E2-SUMO1 complex.
Method: single particle / : Jia L, Nayak D, Ruben EA, Nayak A, Wasmuth EV, Olsen SK

EMDB-44865:
Local refinement of DRD2 bound to LSD in complex with a mini-GoA and scFv16 obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Kim K, Gumpper RH, Fay JF, Roth BL

EMDB-44866:
Global reconstruction of DRD2 bound to LSD in complex with a mini-GoA and scFv16 obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Kim K, Gumpper RH, Fay JF, Roth BL

PDB-9bs9:
Local refinement of DRD2 bound to LSD in complex with a mini-GoA and scFv16 obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Kim K, Gumpper RH, Fay JF, Roth BL

PDB-9bsb:
Global reconstruction of DRD2 bound to LSD in complex with a mini-GoA and scFv16 obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Kim K, Gumpper RH, Fay JF, Roth BL

EMDB-52199:
Focused map of the MnmG dimer within the MnmE-MnmG a4b2 complex
Method: single particle / : Maes L, Galicia C, Fislage M, Versees W

PDB-9hir:
MnmG dimer within the MnmE-MnmG a4b2 complex
Method: single particle / : Maes L, Galicia C, Fislage M, Versees W

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more