[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 157 items for (author: mitchell & p)

EMDB-40180:
MsbA bound to cerastecin C
Method: single particle / : Chen Y, Klein D

PDB-8gk7:
MsbA bound to cerastecin C
Method: single particle / : Chen Y, Klein D

EMDB-41062:
CryoEM structure of an inward-facing MelBSt at a Na(+)-bound and sugar low-affinity conformation
Method: single particle / : Guan L

PDB-8t60:
CryoEM structure of an inward-facing MelBSt at a Na(+)-bound and sugar low-affinity conformation
Method: single particle / : Guan L

EMDB-41048:
Lassa GPC Trimer in complex with Fab 8.11G and nanobody D5
Method: single particle / : Gorman J, Kwong PD

PDB-8t5c:
Lassa GPC Trimer in complex with Fab 8.11G and nanobody D5
Method: single particle / : Gorman J, Kwong PD

EMDB-16242:
Cryo-EM structure of RANBP10-CTLH SR4 complex
Method: single particle / : Sherpa D, Chrustowicz J

EMDB-16243:
Cryo-EM map of ARMC8-specific nanobody bound to CTLH-SR4
Method: single particle / : Chrustowicz J, Sherpa D

EMDB-41302:
Lassa GPC trimer in complex with Fab GP23
Method: single particle / : Gorman J, Kwong PD

EMDB-29978:
McrD binds asymmetrically to methyl-coenzyme M reductase improving active site accessibility during assembly
Method: single particle / : Joiner AMN, Chadwick GL, Nayak DD

EMDB-29979:
Apo-apo MCR assembly intermediate
Method: single particle / : Joiner AMN, Chadwick GL, Nayak DD

PDB-8gf5:
McrD binds asymmetrically to methyl-coenzyme M reductase improving active site accessibility during assembly
Method: single particle / : Joiner AMN, Chadwick GL, Nayak DD

PDB-8gf6:
Apo-apo MCR assembly intermediate
Method: single particle / : Joiner AMN, Chadwick GL, Nayak DD

EMDB-27171:
Human mitochondrial DNA polymerase gamma ternary complex with GT basepair in editing conformer (local refinement of subunit B)
Method: single particle / : Park J, Yin YW

EMDB-27154:
Human mitochondrial DNA polymerase gamma ternary complex with GC basepair
Method: single particle / : Park J, Yin YW

EMDB-27155:
Human mitochondrial DNA polymerase gamma ternary complex with GT basepair in replication conformer
Method: single particle / : Park J, Yin YW

EMDB-27163:
Human mitochondrial DNA polymerase gamma ternary complex with GT basepair in intermediate conformer
Method: single particle / : Park J, Yin YW

EMDB-27169:
Human mitochondrial DNA polymerase gamma ternary complex with GT basepair in editing conformer (consensus)
Method: single particle / : Park J, Yin YW

EMDB-27170:
Human mitochondrial DNA polymerase gamma ternary complex with GT basepair in editing conformer (local refinement of subunit A and primer/template DNA)
Method: single particle / : Park J, Yin YW

EMDB-27172:
Human mitochondrial DNA polymerase gamma ternary complex with GT basepair in editing conformer (composite)
Method: single particle / : Park J, Yin YW

PDB-8d33:
Human mitochondrial DNA polymerase gamma ternary complex with GC basepair
Method: single particle / : Park J, Yin YW

PDB-8d37:
Human mitochondrial DNA polymerase gamma ternary complex with GT basepair in replication conformer
Method: single particle / : Park J, Yin YW

PDB-8d3r:
Human mitochondrial DNA polymerase gamma ternary complex with GT basepair in intermediate conformer
Method: single particle / : Park J, Yin YW

PDB-8d42:
Human mitochondrial DNA polymerase gamma ternary complex with GT basepair in editing conformer (composite)
Method: single particle / : Park J, Yin YW

EMDB-40759:
Cryo-EM structure of NKCC1 Fu_CTD
Method: single particle / : Moseng MA

PDB-8ste:
Cryo-EM structure of NKCC1 Fu_CTD
Method: single particle / : Moseng MA

EMDB-26859:
Ligand-free Lassa GPC Trimer with C3 Symmetry
Method: single particle / : Gorman J, Kwong PD

EMDB-26740:
Ligand-free Lassa GPC Trimer with C1 Symmetry
Method: single particle / : Gorman J, Kwong PD

EMDB-40059:
Homo-octamer of PbuCsx28 protein
Method: single particle / : Park JU, Kellogg EH

PDB-8gi1:
Homo-octamer of PbuCsx28 protein
Method: single particle / : Park JU, Kellogg EH

EMDB-29207:
CryoET tomogram of mitochondria in BACHD mouse model neuron
Method: electron tomography / : Wu GH, Galaz-Montoya JG, Gu Y, Mitchell PG, Wu C, Chiu W

EMDB-29208:
CryoET tomogram of BACHD mouse model neuron showing sheet aggregates
Method: electron tomography / : Wu GH, Galaz-Montoya JG, Gu Y, Mitchell PG, Wu C, Chiu W

EMDB-29210:
CryoET tomogram of purified mitochondria from HD patient iPSC-derived neuron (Q109)
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-29211:
CryoET tomogram of HD patient iPSC-derived neuron (Q66) with PIAS1 hetKO treatment
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-28668:
CryoET tomogram of iPSC-derived control non-HD neuron (Q18)
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-28944:
CryoET tomogram of iPSC-derived control non-HD neuron (Q20)
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-28946:
CryoET tomogram of HD patient iPSC-derived neuron (Q53)
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-29074:
CryoET tomogram of HD patient iPSC-derived neuron (Q66)
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-29075:
CryoET tomogram of HD patient iPSC-derived neuron (Q77)
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-29076:
CryoET tomogram of HD patient iPSC-derived neuron (Q109)
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-29079:
CryoET tomogram of HD patient iPSC-derived neuron (Q66) showing sheet aggregate
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-29080:
CryoET tomogram of HD patient iPSC-derived neuron (Q66) with PIAS1 hetKO treatment
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-29081:
CryoET tomogram of HD patient iPSC-derived neuron (Q66) with GRSF1 KD treatment
Method: electron tomography / : Wu GH, Smith-Geater C, Galaz-Montoya JG, Mitchell PG, Thompson LM, Chiu W

EMDB-29083:
CryoET tomogram of mitochondria in WT mouse neuron
Method: electron tomography / : Wu GH, Galaz-Montoya JG, Gu Y, Mitchell PG, Wu C, Chiu W

EMDB-29084:
CryoET tomogram of mitochondria in BACHD-dN17 mouse model neuron
Method: electron tomography / : Wu GH, Galaz-Montoya JG, Gu Y, Mitchell PG, Wu C, Chiu W

EMDB-24074:
CryoEM structure of human NKCC1
Method: single particle / : Moseng MA

EMDB-24141:
CryoEM structure of human NKCC1 state Fu-I
Method: single particle / : Moseng MA

EMDB-25092:
Human NKCC1 state Fu-II
Method: single particle / : Moseng MA

EMDB-25204:
CryoEM structure of NKCC1 Bu-I
Method: single particle / : Moseng MA

PDB-7mxo:
CryoEM structure of human NKCC1
Method: single particle / : Moseng MA

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more