[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 294 items for (author: maso & l)

EMDB-77065:
CryoEM structure of AdhE spirosome from Clostridium thermocellum uncovered by visual proteomics.
Method: helical / : Agdanowski MP, Rodriguez JA, Moser T, Evans JE

PDB-13he:
CryoEM structure of AdhE spirosome from Clostridium thermocellum uncovered by visual proteomics.
Method: helical / : Agdanowski MP, Rodriguez JA, Moser T, Evans JE

PDB-9nz0:
Cryo-EM structure of vaccine elicited antibody 22F5 bound to the post-fusion conformation of the LayV-F glycoprotein
Method: single particle / : Kumar U, May A, Acharya P

EMDB-48715:
Cryo-EM map of vaccine elicited antibody 22F5 bound to post-fusion conformation of Langya virus F protein
Method: single particle / : Kumar U, Acharya P

EMDB-49948:
Cryo-EM structure of antibody 22F5 in complex with pre-fusion stabilized LayV-F
Method: single particle / : May AJ, Kumar U, Acharya P

PDB-9nz2:
Cryo-EM structure of antibody 22F5 in complex with pre-fusion stabilized LayV-F
Method: single particle / : May AJ, Kumar U, Acharya P

EMDB-49361:
Structure of the cross-HLA supertype antibody R302 bound to a class I MHC presenting a divarasib-modified KRAS-G12C peptide on HLA-A*02
Method: single particle / : Maso L

EMDB-49362:
Structure of the cross-HLA supertype antibody R302 bound to a class I MHC presenting a divarasib-modified KRAS-G12C peptide on HLA-A*03
Method: single particle / : Maso L

PDB-9nfb:
Structure of the cross-HLA supertype antibody R302 bound to a class I MHC presenting a divarasib-modified KRAS-G12C peptide on HLA-A*02
Method: single particle / : Maso L

PDB-9nfc:
Structure of the cross-HLA supertype antibody R302 bound to a class I MHC presenting a divarasib-modified KRAS-G12C peptide on HLA-A*03
Method: single particle / : Maso L

EMDB-47927:
CryoEM Structure Of Respiratory Syncytial Virus Polymerase in complex with Novel Non-Nucleoside Inhibitor Compound 16
Method: single particle / : Yin Y, Tran MT, Yu X, Jonckers T, Carney C

EMDB-47931:
CryoEM map of Respiratory Syncytial Virus Polymerase with Non-Nucleoside Inhibitor compound 21
Method: single particle / : Yin Y, Tran MT, Yu X, Jonckers T, Carney S

PDB-9ecv:
CryoEM Structure Of Respiratory Syncytial Virus Polymerase in complex with Novel Non-Nucleoside Inhibitor Compound 16
Method: single particle / : Yin Y, Tran MT, Yu X, Jonckers T, Carney C

PDB-9ed2:
CryoEM map of Respiratory Syncytial Virus Polymerase with Non-Nucleoside Inhibitor compound 21
Method: single particle / : Yin Y, Tran MT, Yu X, Jonckers T, Carney S

EMDB-70475:
HIV-1 Env BG505 SOSIP.664-His in complex with PGT122 and 3BNC117 Fabs
Method: single particle / : Andrade TG, Ozorowski G, Ward AB

EMDB-70476:
HIV-1 Env BG505 SOSIP.664-dPG-His in complex with PGT122 and 3BNC117 Fabs
Method: single particle / : Andrade TG, Ozorowski G, Ward AB

PDB-9ogt:
HIV-1 Env BG505 SOSIP.664-His in complex with PGT122 and 3BNC117 Fabs
Method: single particle / : Andrade TG, Ozorowski G, Ward AB

PDB-9ogu:
HIV-1 Env BG505 SOSIP.664-dPG-His in complex with PGT122 and 3BNC117 Fabs
Method: single particle / : Andrade TG, Ozorowski G, Ward AB

EMDB-52199:
Focused map of the MnmG dimer within the MnmE-MnmG a4b2 complex
Method: single particle / : Maes L, Galicia C, Fislage M, Versees W

PDB-9hir:
MnmG dimer within the MnmE-MnmG a4b2 complex
Method: single particle / : Maes L, Galicia C, Fislage M, Versees W

EMDB-70124:
Structure of a synthetic antibody (RM010) in complex with a class I MHC presenting a hapten-peptide conjugate
Method: single particle / : Hu Z, Rajak E, Maso L, Koide S

PDB-9o55:
Structure of a synthetic antibody (RM010) in complex with a class I MHC presenting a hapten-peptide conjugate
Method: single particle / : Hu Z, Rajak E, Maso L, Koide S

EMDB-44897:
Cryo-EM structure of rhesus antibody T646-a.01 in complex with HIV-1 Env trimer Q23.17 MD39
Method: single particle / : Roark RS, Shapiro L, Kwong PD

PDB-9btv:
Cryo-EM structure of rhesus antibody T646-a.01 in complex with HIV-1 Env trimer Q23.17 MD39
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-47000:
Rhesus RHA10.01 Fab in complex with HIV-1 Env BG505 DS-SOSIP trimer
Method: single particle / : Gorman J, Kwong PD

PDB-9dmb:
Rhesus RHA10.01 Fab in complex with HIV-1 Env BG505 DS-SOSIP trimer
Method: single particle / : Gorman J, Kwong PD

EMDB-44890:
Rhesus Fab 42056-a.01 in complex with CAP256SU.wk34 RnS SOSIP Env
Method: single particle / : Gorman J, Kwong PD

EMDB-44891:
Rhesus Fab 40591-a.01 in complex with T250.4 RnS SOSIP Env
Method: single particle / : Gorman J, Kwong PD

EMDB-44892:
Rhesus Fab 6561-a.01 in complex with HIV-1 Ce1176.A3 RnS SOSIP Env
Method: single particle / : Gorman J, Kwong PD

PDB-9bth:
Rhesus Fab 42056-a.01 in complex with CAP256SU.wk34 RnS SOSIP Env
Method: single particle / : Gorman J, Kwong PD

PDB-9bti:
Rhesus Fab 40591-a.01 in complex with T250.4 RnS SOSIP Env
Method: single particle / : Gorman J, Kwong PD

PDB-9btj:
Rhesus Fab 6561-a.01 in complex with HIV-1 Ce1176.A3 RnS SOSIP Env
Method: single particle / : Gorman J, Kwong PD

EMDB-61037:
Cryo-EM structure of CasLambda2-crRNA binary complex
Method: single particle / : Omura SN, Hirano H, Itoh Y, Nureki O

EMDB-61038:
Cryo-EM structure of CasLambda2-crRNA-target DNA ternary complex in the incompetent state
Method: single particle / : Omura SN, Hirano H, Itoh Y, Nureki O

EMDB-61039:
Cryo-EM structure of CasLambda2-crRNA-target DNA ternary complex in the intermediate state
Method: single particle / : Omura SN, Hirano H, Itoh Y, Nureki O

EMDB-61040:
Cryo-EM structure of CasLambda2-crRNA-target DNA ternary complex in the NTS-cleaving state
Method: single particle / : Omura SN, Hirano H, Itoh Y, Nureki O

EMDB-61041:
Cryo-EM structure of CasLambda2-crRNA-target DNA ternary complex in the TS-cleaving state
Method: single particle / : Omura SN, Hirano H, Itoh Y, Nureki O

PDB-9izm:
Cryo-EM structure of CasLambda2-crRNA binary complex
Method: single particle / : Omura SN, Hirano H, Itoh Y, Nureki O

PDB-9izp:
Cryo-EM structure of CasLambda2-crRNA-target DNA ternary complex in the incompetent state
Method: single particle / : Omura SN, Hirano H, Itoh Y, Nureki O

PDB-9izq:
Cryo-EM structure of CasLambda2-crRNA-target DNA ternary complex in the intermediate state
Method: single particle / : Omura SN, Hirano H, Itoh Y, Nureki O

PDB-9izr:
Cryo-EM structure of CasLambda2-crRNA-target DNA ternary complex in the NTS-cleaving state
Method: single particle / : Omura SN, Hirano H, Itoh Y, Nureki O

PDB-9izs:
Cryo-EM structure of CasLambda2-crRNA-target DNA ternary complex in the TS-cleaving state
Method: single particle / : Omura SN, Hirano H, Itoh Y, Nureki O

EMDB-48846:
CryoEM structure Of Respiratory Syncytial Virus Polymerase with novel non-nucleoside inhibitor compound 22
Method: single particle / : Yin Y, Yu X, Kalin JH, Tran MT, Sharma S

PDB-9n36:
CryoEM structure Of Respiratory Syncytial Virus Polymerase with novel non-nucleoside inhibitor compound 22
Method: single particle / : Yin Y, Yu X, Kalin JH, Tran MT, Sharma S

EMDB-44893:
Cryo-EM structure of rhesus antibody 41328-a.01 in complex with HIV-1 Env BG505 DS-SOSIP
Method: single particle / : Roark RS, Shapiro L, Kwong PD

PDB-9btl:
Cryo-EM structure of rhesus antibody 41328-a.01 in complex with HIV-1 Env BG505 DS-SOSIP
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-44728:
Cryo-EM structure of rhesus antibody V031-a.01 in complex with HIV-1 Env BG505 DS-SOSIP
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-44729:
Cryo-EM structure of rhesus antibody 6070-a.01 in complex with HIV-1 Env trimer Q23.17 MD39
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-44730:
Cryo-EM structure of rhesus antibody 44715-a.01 in complex with HIV-1 Env BG505 DS-SOSIP
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-44733:
Cryo-EM structure of rhesus antibody V033-a.01 in complex with HIV-1 Env BG505 DS-SOSIP
Method: single particle / : Roark RS, Shapiro L, Kwong PD

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more