[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 101 items for (author: ma & xl)

EMDB-35202:
The cryo-EM structure of OsCyc1 tetramer state
Method: single particle / : Ma XL, Xu HF, Tong YR, Luo YF, Dong QH, Jiang T

EMDB-35206:
The cryo-EM structure of OsCyc1 hexamer state
Method: single particle / : Ma XL, Xu HF, Tong YR, Luo YF, Dong QH, Jiang T

EMDB-35207:
The cryo-EM structure of OsCyc1 dimer state
Method: single particle / : Ma XL, Xu HF, Tong YR, Luo YF, Dong QH, Jiang T

EMDB-35440:
The cryo-EM structure of OsCyc1 that complexed with GGPP
Method: single particle / : Ma XL, Xu HF, Jiang T

EMDB-15330:
RNA polymerase at U-rich pause bound to non-regulatory RNA - inactive, open clamp state
Method: single particle / : Dey S, Weixlbaumer A

PDB-8ac1:
RNA polymerase at U-rich pause bound to non-regulatory RNA - inactive, open clamp state
Method: single particle / : Dey S, Weixlbaumer A

EMDB-15327:
RNA polymerase bound to purified in vitro transcribed regulatory RNA putL - pause prone, closed clamp state
Method: single particle / : Dey S, Weixlbaumer A

EMDB-15328:
RNA polymerase at U-rich pause bound to non-regulatory RNA - pause prone, closed clamp state
Method: single particle / : Dey S, Weixlbaumer A

EMDB-15329:
RNA polymerase at U-rich pause bound to regulatory RNA putL - active, closed clamp state
Method: single particle / : Weixlbaumer A, Dey S

EMDB-15331:
RNA polymerase- post-terminated, open clamp state
Method: single particle / : Dey S, Weixlbaumer A

EMDB-15352:
RNA polymerase at U-rich pause bound to regulatory RNA putL - inactive, open clamp state
Method: single particle / : Dey S, Weixlbaumer A

EMDB-15357:
RNA polymerase at U-rich pause bound to RNA putL triple mutant - pause prone, closed clamp state
Method: single particle / : Dey S, Weixlbaumer A

EMDB-15612:
RNA polymerase at U-rich pause bound to regulatory RNA putL - Pause-prone, closed clamp state
Method: single particle / : Weixlbaumer A, Dey S

EMDB-15613:
RNA polymerase bound to purified in vitro transcribed regulatory RNA putL - inactive, open clamp state
Method: single particle / : Dey S, Weixlbaumer A

PDB-8aby:
RNA polymerase bound to purified in vitro transcribed regulatory RNA putL - pause prone, closed clamp state
Method: single particle / : Dey S, Weixlbaumer A

PDB-8abz:
RNA polymerase at U-rich pause bound to non-regulatory RNA - pause prone, closed clamp state
Method: single particle / : Dey S, Weixlbaumer A

PDB-8ac0:
RNA polymerase at U-rich pause bound to regulatory RNA putL - active, closed clamp state
Method: single particle / : Weixlbaumer A, Dey S

PDB-8ac2:
RNA polymerase- post-terminated, open clamp state
Method: single particle / : Dey S, Weixlbaumer A

PDB-8acp:
RNA polymerase at U-rich pause bound to regulatory RNA putL - inactive, open clamp state
Method: single particle / : Dey S, Weixlbaumer A

PDB-8ad1:
RNA polymerase at U-rich pause bound to RNA putL triple mutant - pause prone, closed clamp state
Method: single particle / : Dey S, Weixlbaumer A

EMDB-31249:
S protein of SARS-CoV-2 in complex with GW01
Method: single particle / : Shen YP, Zhang YY, Yan RH, Li YN, Zhou Q

EMDB-31250:
Local map of S protein of SARS-CoV-2 in complex with GW01 Focused on RND-GW01 sub_complex
Method: single particle / : Shen YP, Zhang YY

EMDB-13706:
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusG (NusG-EC in more-swiveled conformation)
Method: single particle / : Zhu C, Guo X, Weixlbaumer A

EMDB-13707:
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusG (the consensus NusG-EC)
Method: single particle / : Zhu C, Guo X, Weixlbaumer A

EMDB-13709:
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA (the consensus NusA-EC)
Method: single particle / : Zhu C, Guo X, Weixlbaumer A

EMDB-13713:
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA and NusG (the consensus NusA-NusG-EC)
Method: single particle / : Zhu C, Guo X, Weixlbaumer A

EMDB-13714:
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA and NusG (NusA and NusG elongation complex in less-swiveled conformation)
Method: single particle / : Zhu C, Guo X, Weixlbaumer A

EMDB-13715:
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA and NusG (NusA and NusG elongation complex in more-swiveled conformation)
Method: single particle / : Zhu C, Guo X, Weixlbaumer A

EMDB-13716:
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusG (NusG-EC in less-swiveled conformation)
Method: single particle / : Zhu C, Guo X, Weixlbaumer A

EMDB-13717:
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA (NusA elongation complex in less-swiveled conformation)
Method: single particle / : Zhu C, Guo X, Weixlbaumer A

EMDB-13718:
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA (NusA elongation complex in more-swiveled conformation)
Method: single particle / : Zhu C, Guo X, Weixlbaumer A

EMDB-13745:
RNA polymerase elongation complex in more-swiveled conformation
Method: single particle / : Zhu C, Guo X, Weixlbaumer A

EMDB-13746:
RNA polymerase elongation complex in less-swiveled conformation
Method: single particle / : Zhu C, Guo X, Weixlbaumer A

PDB-7py0:
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusG (NusG-EC in more-swiveled conformation)
Method: single particle / : Zhu C, Guo X, Weixlbaumer A

PDB-7py1:
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusG (the consensus NusG-EC)
Method: single particle / : Zhu C, Guo X, Weixlbaumer A

PDB-7py3:
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA (the consensus NusA-EC)
Method: single particle / : Zhu C, Guo X, Weixlbaumer A

PDB-7py5:
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA and NusG (the consensus NusA-NusG-EC)
Method: single particle / : Zhu C, Guo X, Weixlbaumer A

PDB-7py6:
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA and NusG (NusA and NusG elongation complex in less-swiveled conformation)
Method: single particle / : Zhu C, Guo X, Weixlbaumer A

PDB-7py7:
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA and NusG (NusA and NusG elongation complex in more-swiveled conformation)
Method: single particle / : Zhu C, Guo X, Weixlbaumer A

PDB-7py8:
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusG (NusG-EC in less-swiveled conformation)
Method: single particle / : Zhu C, Guo X, Weixlbaumer A

PDB-7pyj:
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA (NusA elongation complex in less-swiveled conformation)
Method: single particle / : Zhu C, Guo X, Weixlbaumer A

PDB-7pyk:
CryoEM structure of E.coli RNA polymerase elongation complex bound to NusA (NusA elongation complex in more-swiveled conformation)
Method: single particle / : Zhu C, Guo X, Weixlbaumer A

PDB-7q0j:
RNA polymerase elongation complex in more-swiveled conformation
Method: single particle / : Zhu C, Guo X, Weixlbaumer A

PDB-7q0k:
RNA polymerase elongation complex in less-swiveled conformation
Method: single particle / : Zhu C, Guo X, Weixlbaumer A

EMDB-13565:
Stator unit 1
Method: single particle / : Bertosin E

EMDB-13566:
Stator unit 2
Method: single particle / : Bertosin E

EMDB-13567:
Stator unit 3
Method: single particle / : Bertosin E

EMDB-13568:
Camshaft
Method: single particle / : Bertosin E

EMDB-13569:
Empty stator
Method: single particle / : Bertosin E

EMDB-13570:
Rotary complex with camshaft bound to stator unit 1
Method: single particle / : Bertosin E

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more