[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,474 items for (author: lv & nn)

EMDB-54112:
CryoEM structure of the microtubule-AKAP13 C1 domain complex
Method: single particle / : Giono M, Choi SR, Filipcik P, Steinmetz MO

EMDB-65801:
Cryo-EM structure of SARS-CoV-2 WT 6p spike protein in complex with P5-1C8 IgG (1.5 IgG)
Method: single particle / : Lv NN, Yang RY

EMDB-65802:
Cryo-EM structure of SARS-CoV-2 WT 6p spike protein in complex with P5-1C8 IgG (1 IgG)
Method: single particle / : Lv NN, Yang RY

EMDB-65803:
Immune complex of P5-1C8 Fab binding the RBD of Omicron JN.1 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-65804:
Immune complex of P5-1C8 Fab binding the RBD of Omicron BA.1 6p spike protein (2 Fab)
Method: single particle / : Lv NN, Yang RY

EMDB-65805:
Immune complex of P5-1C8 Fab binding the RBD of Omicron BA.1 6p spike protein (1 Fab)
Method: single particle / : Lv NN, Yang RY

EMDB-65806:
Immune complex of P5-1C8 IgG binding the RBD of Omicron BA.1 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-65807:
Immune complex of P5-1C8 Fab binding the RBD of SARS-CoV-2 WT 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-65808:
Immune complex of P5-1C8 IgG binding the RBD of SARS-CoV-2 WT 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-53969:
FZD7 in complex with negative allosteric modulator C407
Method: single particle / : Scharf MM, Graetz L, Kinsolving J, Voss J, Carrasco-Busturia D, Forsberg B, Kolb P, Schulte G

PDB-9rhg:
FZD7 in complex with negative allosteric modulator C407
Method: single particle / : Scharf MM, Graetz L, Kinsolving J, Voss J, Carrasco-Busturia D, Forsberg B, Kolb P, Schulte G

EMDB-70449:
Globular domain of monkeypox virus OPG153 (A28) bound to antibody 02M12
Method: single particle / : Rundlet EJ, Zhou L, McLellan JS

EMDB-70450:
Globular domain of monkeypox virus OPG153 (A28) in complex with antibodies 08E11 and 12I12
Method: single particle / : Zhou L, Rundlet EJ, McLellan JS

PDB-9og1:
Globular domain of monkeypox virus OPG153 (A28) bound to antibody 02M12
Method: single particle / : Rundlet EJ, Zhou L, McLellan JS

PDB-9og2:
Globular domain of monkeypox virus OPG153 (A28) in complex with antibodies 08E11 and 12I12
Method: single particle / : Zhou L, Rundlet EJ, McLellan JS

EMDB-52913:
Human chondroitin sulfate polymerase complex CHSY3-CHPF
Method: single particle / : Dutta P, Cordeiro RL, Wild R

EMDB-53011:
Focused refinement map of CHSY3-CHPF complex: N-terminal part
Method: single particle / : Dutta P, Cordeiro RL, Wild R

EMDB-53012:
Focused refinement map of CHSY3-CHPF complex: C-terminal part
Method: single particle / : Dutta P, Cordeiro RL, Wild R

EMDB-53018:
Consensus map of CHSY3-CHPF complex
Method: single particle / : Dutta P, Cordeiro RL, Wild R

EMDB-70822:
Consensus Map of PI4KA/TTC7B/FAM126A/F3IN Nanobody
Method: single particle / : Shaw AL, Suresh S, Yip CK, Burke JE

EMDB-70824:
Local Refinement A of PI4KA/TTC7B/FAM126A/F3IN Nanobody
Method: single particle / : Shaw AL, Suresh S, Yip CK, Burke JE

EMDB-70825:
Local Refinement B of PI4KA/TTC7B/FAM126A/F3IN nanbody
Method: single particle / : Shaw AL, Suresh S, Yip CK, Burke JE

EMDB-70826:
Cryo-EM structure of the PI4KA complex bound to an EFR3 interfering nanobody (F3IN)
Method: single particle / : Shaw AL, Suresh S, Yip CK, Burke JE

PDB-9ot6:
Cryo-EM structure of the PI4KA complex bound to an EFR3 interfering nanobody (F3IN)
Method: single particle / : Shaw AL, Suresh S, Yip CK, Burke JE

EMDB-73631:
The Kaggle CryoET Object Identification Challenge: ground truth 80S ribosome
Method: subtomogram averaging / : Peck A, Hutchings J, Schwartz J, Paraan M

EMDB-73633:
The Kaggle CryoET Object Identification Challenge: first place 80S ribosome
Method: subtomogram averaging / : Peck A, Hutchings J, Schwartz J, Paraan M

EMDB-73634:
The Kaggle CryoET Object Identification Challenge: ground truth apo-ferritin
Method: subtomogram averaging / : Peck A, Hutchings J, Schwartz J, Paraan M

EMDB-73635:
The Kaggle CryoET Object Identification Challenge: first place apo-ferritin
Method: subtomogram averaging / : Peck A, Hutchings J, Schwartz J, Paraan M

EMDB-73636:
The Kaggle CryoET Object Identification Challenge: ground truth virus-like-particle
Method: subtomogram averaging / : Peck A, Hutchings J, Schwartz J, Paraan M

EMDB-73637:
The Kaggle CryoET Object Identification Challenge: first place virus-like-particle
Method: subtomogram averaging / : Peck A, Hutchings J, Schwartz J, Paraan M

EMDB-73638:
The Kaggle CryoET Object Identification Challenge: ground truth beta-galactosidase
Method: subtomogram averaging / : Peck A, Hutchings J, Schwartz J, Paraan M

EMDB-73639:
The Kaggle CryoET Object Identification Challenge: first place beta-galactosidase
Method: subtomogram averaging / : Peck A, Hutchings J, Schwartz J, Paraan M

EMDB-73640:
The Kaggle CryoET Object Identification Challenge: ground truth beta-amylase
Method: subtomogram averaging / : Peck A, Hutchings J, Schwartz J, Paraan M

EMDB-73641:
The Kaggle CryoET Object Identification Challenge: first place beta-amylase
Method: subtomogram averaging / : Peck A, Hutchings J, Schwartz J, Paraan M

EMDB-73642:
The Kaggle CryoET Object Identification Challenge: ground truth thyroglobulin
Method: subtomogram averaging / : Peck A, Hutchings J, Schwartz J, Paraan M

EMDB-73643:
The Kaggle CryoET Object Identification Challenge: first place thyroglobulin
Method: subtomogram averaging / : Peck A, Hutchings J, Schwartz J, Paraan M

EMDB-62578:
Structure of EP67 bound to human C5aR1 in complex with Go
Method: single particle / : Banerjee R, Ganguly M, Yadav MK, Mishra S, Dalal A, Shukla AK

EMDB-62580:
Structure of JR14a bound to human C3aR in complex with Go
Method: single particle / : Banerjee R, Ganguly M, Yadav MK, Mishra S, Dalal A, Shukla AK

EMDB-62586:
Structure of mouse TLQP21 bound to mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62588:
Structure of human TLQP21 bound to mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62598:
Structure of SB290157 bound to human C3aR in complex with Go (Full map)
Method: single particle / : Banerjee R, Sano FK, Yadav MK, Sawada K, Ganguly M, Mishra S, Dalal A, Nureki O, Shukla AK

EMDB-62610:
Structure of mouse C5a bound mouse C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Yadav R, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62619:
Structure of mouse C5a-desArg bound mouse C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Yadav R, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62624:
Structure of human C5a-desArg bound mouse C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav MK, Yadav R, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62626:
Structure of EP67 bound mouse C5aR1 in complex with Go
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62636:
Structure of beta-arrestin2 in complex with mouse C5aR1pp
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62649:
Structure of beta-arrestin1 in complex with mouse C5aR1pp
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62651:
Structure of EP67 bound human C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62654:
Structure of EP67 bound mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

EMDB-62665:
Structure of mouse C3a bound mouse C3aR in complex with Go
Method: single particle / : Banerjee R, Yadav R, Yadav MK, Ganguly M, Mishra S, Dalal A, Gati C, Shukla AK

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more