[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,644 items for (author: lv & nn)

EMDB-72009:
Q10M-055 Fab in complex with HIV-1 Env Q23 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-72031:
Q12QBM-007 Fab in complex with HIV-1 Env BG505 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-72033:
Q9M-023 Fab in complex with HIV-1 Env BG505 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-72035:
Q12BBM-069 Fab in complex with HIV-1 Env BG505 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-74449:
Q7M-675 Fab in complex with HIV-1 Env WITO NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9py5:
Q10M-055 Fab in complex with HIV-1 Env Q23 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9pyd:
Q12QBM-007 Fab in complex with HIV-1 Env BG505 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9pyh:
Q9M-023 Fab in complex with HIV-1 Env BG505 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9pyk:
Q12BBM-069 Fab in complex with HIV-1 Env BG505 NFL TD CC3+
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-56980:
focused refined map; 40S head with TC from human 48S PIC on mRNA (non-Kozak)
Method: single particle / : von Loeffelholz O, Klaholz B

EMDB-56981:
consensus map; human 48S PIC on Kozak mRNA with eIF1A W70A mutant
Method: single particle / : von Loeffelholz O, Klaholz B

EMDB-56982:
focused refined map; 40S body with eIF1A from human 48S PIC with eIF1A W70A mutant on Kozak mRNA
Method: single particle / : von Loeffelholz O, Klaholz B

EMDB-56983:
focused refined map; 40S head with TC from human 48S PIC with eIF1A W70A mutant on Kozak mRNA
Method: single particle / : von Loeffelholz O, Klaholz B

EMDB-57004:
human 48S PIC with Kozak mRNA and eIF1A W70A mutant
Method: single particle / : von Loeffelholz O, Barchet C, Klaholz B

EMDB-57015:
focused refined map; 40S body with eIF1A from human 48S PIC on Kozak mRNA (Kozak_2)
Method: single particle / : von Loeffelholz O, Klaholz B

EMDB-57009:
human 48S PIC with mRNA (Kozak_1)
Method: single particle / : von Loeffelholz O, Barchet C, Klaholz B

EMDB-57010:
human 48S PIC with mRNA (Kozak_2)
Method: single particle / : von Loeffelholz O, Barchet C, Klaholz B

EMDB-57013:
focused refined map; human eIF3 in 48S PIC on Kozak mRNA (Kozak_2)
Method: single particle / : von Loeffelholz O, Klaholz B

EMDB-57014:
focused refined map; 40S head with TC from human 48S PIC on Kozak mRNA (Kozak_2)
Method: single particle / : von Loeffelholz O, Klaholz B

EMDB-57016:
consensus map; human 48S PIC on Kozak mRNA (Kozak_2)
Method: single particle / : von Loeffelholz O, Klaholz B

EMDB-57017:
focused refined map; map for 40S body from human 48S PIC on Kozak mRNA (Kozak_1)
Method: single particle / : von Loeffelholz O, Klaholz B

EMDB-57018:
focused refined map; 40S head with TC from human 48S PIC on Kozak mRNA (Kozak_1)
Method: single particle / : von Loeffelholz O, Klaholz B

EMDB-57019:
focused refined map; human eIF3 in 48S PIC on Kozak mRNA (Kozak_1)
Method: single particle / : von Loeffelholz O, Klaholz B

EMDB-57020:
consensus map; human 48S PIC on Kozak mRNA (Kozak_1)
Method: single particle / : von Loeffelholz O, Klaholz B

EMDB-55395:
Atg2-Atg18 complex from yeast
Method: single particle / : Chumpen Ramirez S, Shvarev D, Vargas Duarte P, Milach J, Lang E, Kuchenbuch S, Reggiori F, Moeller A, Ungermann C

PDB-9t0c:
Atg2-Atg18 complex from yeast
Method: single particle / : Chumpen Ramirez S, Shvarev D, Vargas Duarte P, Milach J, Lang E, Kuchenbuch S, Reggiori F, Moeller A, Ungermann C

EMDB-69467:
SARS-CoV-2 polymerase with incorporated and pre-incorporated AT-9052-Sp
Method: single particle / : Zhu YX, Shi H, Wang MF

EMDB-55043:
CM1-activated gTuRC in complex with nascent alpha-E254D mutant microtubules
Method: single particle / : Llorca O, Serna M, Lopez-Perrote A

EMDB-55044:
CM1-activated gTuRC in complex with nascent wildtype microtubules
Method: single particle / : Llorca O, Serna M, Lopez-Perrote A

PDB-9smx:
CM1-activated gTuRC in complex with nascent alpha-E254D mutant microtubules
Method: single particle / : Llorca O, Serna M, Lopez-Perrote A

EMDB-56440:
CryoEM map of chloroplastic photosynthetic NADP(+)-dependent malic enzyme
Method: single particle / : Drakonaki A, Gatsogiannis C

EMDB-56441:
CryoEM map of chloroplastic photosynthetic NADP(+)-dependent malic enzyme mutant (G200R) at pH 8
Method: single particle / : Drakonaki A, Gatsogiannis C

EMDB-56442:
CryoEM map of chloroplastic photosynthetic NADP(+)-dependent malic enzyme mutant (G200R) at pH 4.8
Method: single particle / : Drakonaki A, Gatsogiannis C

EMDB-56443:
CryoEM map of dimeric non-photosynthetic NADP(+)-dependent malic enzyme
Method: single particle / : Drakonaki A, Gatsogiannis C

EMDB-56444:
CryoEM map of tetrameric non-photosynthetic NADP(+)-dependent malic enzyme
Method: single particle / : Drakonaki A, Gatsogiannis C

EMDB-70011:
TMEM16F in liposomes in the absence of Ca2+ (expanded state)
Method: single particle / : Feng Z, Accardi A

EMDB-70012:
TMEM16F in liposomes in the presence of Ca2+ (closed state)
Method: single particle / : Feng Z, Accardi A

EMDB-70013:
TMEM16F in liposomes in the presence of Ca2+ (active state)
Method: single particle / : Feng Z, Accardi A

EMDB-70014:
TMEM16F R478E/E604R mutant in liposomes in the presence of Ca2+
Method: single particle / : Feng Z, Accardi A

EMDB-70015:
TMEM16F D409G mutant in liposomes in the presence of Ca2+ (closed state)
Method: single particle / : Feng Z, Accardi A

EMDB-70017:
TMEM16F D409G mutant in liposomes in the presence of Ca2+ (active state)
Method: single particle / : Feng Z, Accardi A

PDB-9o1l:
TMEM16F in liposomes in the absence of Ca2+ (expanded state)
Method: single particle / : Feng Z, Accardi A

PDB-9o1m:
TMEM16F in liposomes in the presence of Ca2+ (closed state)
Method: single particle / : Feng Z, Accardi A

PDB-9o1n:
TMEM16F in liposomes in the presence of Ca2+ (active state)
Method: single particle / : Feng Z, Accardi A

PDB-9o1o:
TMEM16F R478E/E604R mutant in liposomes in the presence of Ca2+
Method: single particle / : Feng Z, Accardi A

PDB-9o1p:
TMEM16F D409G mutant in liposomes in the presence of Ca2+ (closed state)
Method: single particle / : Feng Z, Accardi A

PDB-9o1q:
TMEM16F D409G mutant in liposomes in the presence of Ca2+ (active state)
Method: single particle / : Feng Z, Accardi A

EMDB-76895:
The Kaggle CryoET Object Identification Challenge: first place 80S ribosome
Method: subtomogram averaging / : Peck A, Hutchings J, Schwartz J, Paraan M

EMDB-76896:
The Kaggle CryoET Object Identification Challenge: first place apo-ferritin
Method: subtomogram averaging / : Peck A, Hutchings J, Schwartz J, Paraan M

EMDB-76898:
The Kaggle CryoET Object Identification Challenge: first place virus-like-particle
Method: subtomogram averaging / : Peck A, Hutchings J, Schwartz J, Paraan M

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more