[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 3,033 items for (author: long & y)

EMDB-67778:
A Wnt3a/Fzd8-CRD/LRP6-E3E4 complex with FKBP
Method: single particle / : Yue D, Sun G, Zhang L, Wang Z, Xu W

EMDB-67779:
A Wnt3a/Fzd8-CRD/LRP6-E3E4-LA complex with FKBP
Method: single particle / : Yue D, Sun G, Zhang L, Wang Z, Xu W

EMDB-67780:
Wnt3a signalosome extracellular complex
Method: single particle / : Yue D, Sun G, Zhang L, Wang Z, Xu W

PDB-21kr:
A Wnt3a/Fzd8-CRD/LRP6-E3E4 complex with FKBP
Method: single particle / : Yue D, Sun G, Zhang L, Wang Z, Xu W

PDB-21ks:
A Wnt3a/Fzd8-CRD/LRP6-E3E4-LA complex with FKBP
Method: single particle / : Yue D, Sun G, Zhang L, Wang Z, Xu W

PDB-21kt:
Wnt3a signalosome extracellular complex
Method: single particle / : Yue D, Sun G, Zhang L, Wang Z, Xu W

EMDB-67871:
DRT4 homohexamer
Method: single particle / : Xiao J, Wang L

EMDB-67946:
DRT4 homohexamer with dGTPaS
Method: single particle / : Xiao J, Wang L

EMDB-67947:
DRT4 homohexamer with dATP
Method: single particle / : Xiao J, Wang L

EMDB-67950:
DRT4 homohexamer with dATP, dGTPaS, SSB, RNA
Method: single particle / : Xiao J, Wang L

EMDB-68056:
DRT4 homohexamer with dATP, SSB
Method: single particle / : Xiao J, Wang L

EMDB-69681:
DRT4 homohexamer with dGTP
Method: single particle / : Wang L, Li J

EMDB-69682:
DRT4 homohexamer with dGTP, GMP
Method: single particle / : Wang L, Li J

EMDB-69683:
DRT4 homohexamer with dGTP, RNA
Method: single particle / : Wang L, Li J

EMDB-69684:
DRT4 homohexamer with dGTP, ssRNA (local refinement)
Method: single particle / : Wang L, Li J

PDB-21ou:
DRT4 homohexamer
Method: single particle / : Xiao J, Wang L

PDB-21ro:
DRT4 homohexamer with dGTPaS
Method: single particle / : Xiao J, Wang L

PDB-21rp:
DRT4 homohexamer with dATP
Method: single particle / : Xiao J, Wang L

PDB-21rs:
DRT4 homohexamer with dATP, dGTPaS, SSB, RNA
Method: single particle / : Xiao J, Wang L

PDB-21wo:
DRT4 homohexamer with dATP, SSB
Method: single particle / : Xiao J, Wang L

PDB-24na:
DRT4 homohexamer with dGTP
Method: single particle / : Wang L, Li J

PDB-24nb:
DRT4 homohexamer with dGTP, GMP
Method: single particle / : Wang L, Li J

PDB-24nc:
DRT4 homohexamer with dGTP, RNA
Method: single particle / : Wang L, Li J

PDB-24nd:
DRT4 homohexamer with dGTP, ssRNA (local refinement)
Method: single particle / : Wang L, Li J

EMDB-65364:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase complex bound to viral protein C
Method: single particle / : Du T, Wang J, Wu S, Ru H

EMDB-65365:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase
Method: single particle / : Du T, Wang J, Wu S, Ru H

EMDB-65366:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase complex
Method: single particle / : Du T, Wang J, Wu S, Ru H

EMDB-65367:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase bound to allosteric inhibitor ERDRP-0519
Method: single particle / : Du T, Wang J, Wu S, Ru H

EMDB-65368:
Cryo-EM structure of the Nipah virus RNA-dependent RNA polymerase complex bound to allosteric inhibitor ERDRP-0519
Method: single particle / : Du T, Wang J, Wu S, Ru H

PDB-9vui:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase complex bound to viral protein C
Method: single particle / : Du T, Wang J, Wu S, Ru H

PDB-9vuj:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase
Method: single particle / : Du T, Wang J, Wu S, Ru H

PDB-9vuk:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase complex
Method: single particle / : Du T, Wang J, Wu S, Ru H

PDB-9vul:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase bound to allosteric inhibitor ERDRP-0519
Method: single particle / : Du T, Wang J, Wu S, Ru H

PDB-9vum:
Cryo-EM structure of the Nipah virus RNA-dependent RNA polymerase complex bound to allosteric inhibitor ERDRP-0519
Method: single particle / : Du T, Wang J, Wu S, Ru H

EMDB-47893:
Cryo-EM map of 2 VRC36 Fabs bound to HIV-1 Env trimer
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Shapiro L, Zhang B, Du H, Rubin S, Pierson TC, Doria-Rose NA, Zhou T, Kwong PD

EMDB-47895:
Cryo-EM map of 4 VRC36 Fabs bound to HIV-1 Env trimer
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Shapiro L, Zhang B, Du H, Rubin S, Pierson TC, Doria-Rose NA, Zhou T, Kwong PD

EMDB-70607:
Composite map of six VRC35 Fabs and three MEDI8852 Fabs bound to influenza H3N2 Victoria 2011 hemagglutinin
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Pierson TC, Doria-Rose NA, Kwong PD, Zhou T

PDB-9om5:
Composite map of six VRC35 Fabs and three MEDI8852 Fabs bound to influenza H3N2 Victoria 2011 hemagglutinin
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Pierson TC, Doria-Rose NA, Kwong PD, Zhou T

EMDB-47885:
Cryo-EM local map of dimerized VRC36 Fabs
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Shapiro L, Pierson TC, Doria-Rose NA, Zhou T, Kwong PD

EMDB-67623:
Cryo-EM structure of DddT in closed substrate-free conformation
Method: single particle / : Zhu WJ, Wang P

EMDB-67625:
Cryo-EM structure of DddT G101D in substrate-free outward open conformation
Method: single particle / : Zhu WJ, Wang P

EMDB-67626:
Cryo-EM structure of DddT in closed DMSP-bound conformation
Method: single particle / : Zhu WJ, Wang P

EMDB-67627:
Cryo-EM structure of DddT in closed substrate-free conformation in the presence of potassium ions and dimethylsulfoniopropionate
Method: single particle / : Zhu WJ, Wang P

EMDB-67628:
Cryo-EM structure of DddT G101D in substrate-free inward open conformation
Method: single particle / : Zhu WJ, Wang P

PDB-21ff:
Cryo-EM structure of DddT in closed substrate-free conformation
Method: single particle / : Zhu WJ, Wang P

PDB-21fh:
Cryo-EM structure of DddT G101D in substrate-free outward open conformation
Method: single particle / : Zhu WJ, Wang P

PDB-21fi:
Cryo-EM structure of DddT in closed DMSP-bound conformation
Method: single particle / : Zhu WJ, Wang P

PDB-21fj:
Cryo-EM structure of DddT in closed substrate-free conformation in the presence of potassium ions and dimethylsulfoniopropionate
Method: single particle / : Zhu WJ, Wang P

PDB-21fk:
Cryo-EM structure of DddT G101D in substrate-free inward open conformation
Method: single particle / : Zhu WJ, Wang P

EMDB-62782:
Cryo-electron microscopic structure of a novel amidohydrolase ADH3 triple mutation
Method: single particle / : Dai LH, He BY, Hu YM, Xu YH, Huang JP, Xie ZZ, Li H, Niu D, Guo RT, Chen CC

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more